RNA–Protein interactions for RNA: ENST00000553368.1

APEX1-204, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 3

Gene APEX1, Length 304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-204ENST00000553368 TTC21AQ8NDW8 1320 aa21.57■■□□□ 1.04
APEX1-204ENST00000553368 TOM1L2Q6ZVM7 507 aa21.57■■□□□ 1.04
APEX1-204ENST00000553368 KCNH5Q8NCM2 988 aa21.57■■□□□ 1.04
APEX1-204ENST00000553368 DDB1Q16531 1140 aa21.56■■□□□ 1.04
APEX1-204ENST00000553368 SBF2Q86WG5 1849 aa21.56■■□□□ 1.04
APEX1-204ENST00000553368 PLSCR1O15162 318 aa21.55■■□□□ 1.04
APEX1-204ENST00000553368 NEUROD1Q13562 356 aa21.55■■□□□ 1.04
APEX1-204ENST00000553368 RGPD3A6NKT7 1758 aaPredicted RBP21.54■■□□□ 1.04
APEX1-204ENST00000553368 RGPD4Q7Z3J3 1758 aa21.54■■□□□ 1.04
APEX1-204ENST00000553368 CDCA7Q9BWT1 371 aaPredicted RBP21.54■■□□□ 1.04
APEX1-204ENST00000553368 WNK3Q9BYP7 1800 aa21.54■■□□□ 1.04
APEX1-204ENST00000553368 BCL9O00512 1426 aa21.54■■□□□ 1.04
APEX1-204ENST00000553368 CARD10Q9BWT7 1032 aa21.53■■□□□ 1.04
APEX1-204ENST00000553368 SBNO2Q9Y2G9 1366 aa21.52■■□□□ 1.04
APEX1-204ENST00000553368 RGPD5Q99666 1765 aa21.52■■□□□ 1.04
APEX1-204ENST00000553368 NFAT5O94916 1531 aa21.52■■□□□ 1.04
APEX1-204ENST00000553368 MARCH10Q8NA82 808 aaPredicted RBP21.51■■□□□ 1.03
APEX1-204ENST00000553368 BCL11BQ9C0K0 894 aaPredicted RBP21.51■■□□□ 1.03
APEX1-204ENST00000553368 KTN1Q86UP2 1357 aaKnown RBP21.5■■□□□ 1.03
APEX1-204ENST00000553368 PTF1AQ7RTS3 328 aa21.49■■□□□ 1.03
APEX1-204ENST00000553368 ABCC6O95255 1503 aa21.49■■□□□ 1.03
APEX1-204ENST00000553368 MON2Q7Z3U7 1717 aa21.49■■□□□ 1.03
APEX1-204ENST00000553368 USP31Q70CQ4 1352 aa21.48■■□□□ 1.03
APEX1-204ENST00000553368 SOX12O15370 315 aa21.47■■□□□ 1.03
APEX1-204ENST00000553368 KCNQ2O43526 872 aa21.47■■□□□ 1.03
APEX1-204ENST00000553368 SPON1Q9HCB6 807 aa21.47■■□□□ 1.03
APEX1-204ENST00000553368 CSB-PGBD3P0DP91 1061 aa21.46■■□□□ 1.03
APEX1-204ENST00000553368 PROM2Q8N271 834 aa21.46■■□□□ 1.03
APEX1-204ENST00000553368 USP54Q70EL1 1684 aa21.46■■□□□ 1.03
APEX1-204ENST00000553368 CCDC7Q96M83 1385 aa21.46■■□□□ 1.03
APEX1-204ENST00000553368 CD163L1Q9NR16 1453 aa21.45■■□□□ 1.03
APEX1-204ENST00000553368 ANO8Q9HCE9 1232 aaPredicted RBP21.45■■□□□ 1.02
APEX1-204ENST00000553368 EXOC5O00471 708 aa21.44■■□□□ 1.02
APEX1-204ENST00000553368 CARD11Q9BXL7 1154 aa21.43■■□□□ 1.02
APEX1-204ENST00000553368 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.42■■□□□ 1.02
APEX1-204ENST00000553368 TNS2Q63HR2 1409 aa21.41■■□□□ 1.02
APEX1-204ENST00000553368 CASZ1Q86V15 1759 aa21.41■■□□□ 1.02
APEX1-204ENST00000553368 ERBB3P21860 1342 aa21.4■■□□□ 1.02
APEX1-204ENST00000553368 NME9Q86XW9 330 aa21.4■■□□□ 1.02
APEX1-204ENST00000553368 PUS7Q96PZ0 661 aaKnown RBP21.39■■□□□ 1.01
APEX1-204ENST00000553368 SLC12A5Q9H2X9 1139 aa21.39■■□□□ 1.01
APEX1-204ENST00000553368 NINLQ9Y2I6 1382 aa21.38■■□□□ 1.01
APEX1-204ENST00000553368 TXNRD1Q16881 649 aa21.38■■□□□ 1.01
APEX1-204ENST00000553368 HDGFL2Q7Z4V5 671 aaPredicted RBP21.38■■□□□ 1.01
APEX1-204ENST00000553368 PPP1R1BQ9UD71 204 aaPredicted RBP21.38■■□□□ 1.01
APEX1-204ENST00000553368 EDC4Q6P2E9 1401 aaKnown RBP21.38■■□□□ 1.01
APEX1-204ENST00000553368 TMC1Q8TDI8 760 aa21.37■■□□□ 1.01
APEX1-204ENST00000553368 PDGFDQ9GZP0 370 aaPredicted RBP21.36■■□□□ 1.01
APEX1-204ENST00000553368 LTN1O94822 1766 aa21.36■■□□□ 1.01
APEX1-204ENST00000553368 NHSQ6T4R5 1651 aa21.34■■□□□ 1.01
APEX1-204ENST00000553368 NLRP2Q9NX02 1062 aa21.34■■□□□ 1.01
APEX1-204ENST00000553368 A0A1W2PP64 1363 aa21.34■■□□□ 1.01
APEX1-204ENST00000553368 IL2RBP14784 551 aa21.33■■□□□ 1.01
APEX1-204ENST00000553368 SLC15A2Q16348 729 aa21.33■■□□□ 1.01
APEX1-204ENST00000553368 ANKRD24Q8TF21 1146 aa21.33■■□□□ 1.01
APEX1-204ENST00000553368 TERF2IPQ9NYB0 399 aa21.33■■□□□ 1.01
APEX1-204ENST00000553368 STK32BQ9NY57 414 aa21.32■■□□□ 1
APEX1-204ENST00000553368 PTGER2P43116 358 aa21.31■■□□□ 1
APEX1-204ENST00000553368 TONSLQ96HA7 1378 aa21.31■■□□□ 1
APEX1-204ENST00000553368 ZBTB7AO95365 584 aa21.3■■□□□ 1
APEX1-204ENST00000553368 YY1P25490 414 aa21.3■■□□□ 1
APEX1-204ENST00000553368 ACSBG1Q96GR2 724 aa21.3■■□□□ 1
APEX1-204ENST00000553368 TESK2Q96S53 571 aa21.3■■□□□ 1
APEX1-204ENST00000553368 IP6K1Q92551 441 aa21.29■■□□□ 1
APEX1-204ENST00000553368 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
APEX1-204ENST00000553368 PAPPAQ13219 1627 aa21.26■□□□□ 0.99
APEX1-204ENST00000553368 MYOM1P52179 1685 aa21.26■□□□□ 0.99
APEX1-204ENST00000553368 ATF5Q9Y2D1 282 aaPredicted RBP21.26■□□□□ 0.99
APEX1-204ENST00000553368 BTAF1O14981 1849 aa21.25■□□□□ 0.99
APEX1-204ENST00000553368 ST20-MTHFSA0A0A6YYL1 179 aa21.25■□□□□ 0.99
APEX1-204ENST00000553368 SLC24A1O60721 1099 aa21.25■□□□□ 0.99
APEX1-204ENST00000553368 SGIP1Q9BQI5 828 aa21.25■□□□□ 0.99
APEX1-204ENST00000553368 MTFR1LQ9H019 292 aa21.25■□□□□ 0.99
APEX1-204ENST00000553368 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
APEX1-204ENST00000553368 COG3Q96JB2 828 aa21.21■□□□□ 0.99
APEX1-204ENST00000553368 LRRC4BQ9NT99 713 aa21.21■□□□□ 0.99
APEX1-204ENST00000553368 MAP3K19Q56UN5 1328 aa21.21■□□□□ 0.99
APEX1-204ENST00000553368 HOXC9P31274 260 aa21.2■□□□□ 0.98
APEX1-204ENST00000553368 KAT6BQ8WYB5 2073 aa21.2■□□□□ 0.98
APEX1-204ENST00000553368 LTV1Q96GA3 475 aaPredicted RBP21.19■□□□□ 0.98
APEX1-204ENST00000553368 SYT17Q9BSW7 474 aa21.19■□□□□ 0.98
APEX1-204ENST00000553368 FHDC1Q9C0D6 1143 aaPredicted RBP21.19■□□□□ 0.98
APEX1-204ENST00000553368 FBLN1P23142 703 aa21.18■□□□□ 0.98
APEX1-204ENST00000553368 ZNF827Q17R98 1081 aa21.18■□□□□ 0.98
APEX1-204ENST00000553368 DDX54Q8TDD1 881 aaKnown RBP21.18■□□□□ 0.98
APEX1-204ENST00000553368 ANKRD36BQ8N2N9 1353 aa21.18■□□□□ 0.98
APEX1-204ENST00000553368 SLC27A3Q5K4L6 730 aa21.17■□□□□ 0.98
APEX1-204ENST00000553368 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
APEX1-204ENST00000553368 AMPHP49418 695 aa21.16■□□□□ 0.98
APEX1-204ENST00000553368 RTL1A6NKG5 1358 aa21.14■□□□□ 0.98
APEX1-204ENST00000553368 MAP3K5Q99683 1374 aa21.14■□□□□ 0.98
APEX1-204ENST00000553368 ARXQ96QS3 562 aa21.14■□□□□ 0.97
APEX1-204ENST00000553368 RGPD2P0DJD1 1756 aa21.14■□□□□ 0.97
APEX1-204ENST00000553368 QSER1Q2KHR3 1735 aa21.14■□□□□ 0.97
APEX1-204ENST00000553368 SHANK3Q9BYB0 1731 aa21.13■□□□□ 0.97
APEX1-204ENST00000553368 FYB1O15117 783 aa21.13■□□□□ 0.97
APEX1-204ENST00000553368 ZCRB1Q8TBF4 217 aaKnown RBP21.13■□□□□ 0.97
APEX1-204ENST00000553368 NSD2O96028 1365 aa21.12■□□□□ 0.97
APEX1-204ENST00000553368 PRIM1P49642 420 aaKnown RBP21.12■□□□□ 0.97
APEX1-204ENST00000553368 SLC16A10Q8TF71 515 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms