RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 DZIP1LQ8IYY4 767 aaKnown RBP13.05□□□□□ -0.32
CNOT2-243ENST00000553078 COG6Q9Y2V7 657 aa13.05□□□□□ -0.32
CNOT2-243ENST00000553078 LAS1LQ9Y4W2 734 aaKnown RBP13.05□□□□□ -0.32
CNOT2-243ENST00000553078 NCKAP5LQ9HCH0 1330 aa13.05□□□□□ -0.32
CNOT2-243ENST00000553078 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
CNOT2-243ENST00000553078 KIF24Q5T7B8 1368 aa13.05□□□□□ -0.32
CNOT2-243ENST00000553078 KCNA6P17658 529 aa13.04□□□□□ -0.32
CNOT2-243ENST00000553078 AMPHP49418 695 aa13.04□□□□□ -0.32
CNOT2-243ENST00000553078 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
CNOT2-243ENST00000553078 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
CNOT2-243ENST00000553078 MVPQ14764 893 aaKnown RBP13.03□□□□□ -0.32
CNOT2-243ENST00000553078 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
CNOT2-243ENST00000553078 BCL2L13Q9BXK5 485 aa13.03□□□□□ -0.32
CNOT2-243ENST00000553078 RWDD1Q9H446 243 aaPredicted RBP13.03□□□□□ -0.32
CNOT2-243ENST00000553078 DDX19BQ9UMR2 479 aa13.03□□□□□ -0.32
CNOT2-243ENST00000553078 PANK1Q8TE04 598 aa13.02□□□□□ -0.33
CNOT2-243ENST00000553078 DDRGK1Q96HY6 314 aa13.02□□□□□ -0.33
CNOT2-243ENST00000553078 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.33
CNOT2-243ENST00000553078 ADGRL3Q9HAR2 1447 aa13.02□□□□□ -0.33
CNOT2-243ENST00000553078 PDE4AP27815 886 aa13.01□□□□□ -0.33
CNOT2-243ENST00000553078 RTL1A6NKG5 1358 aa13.01□□□□□ -0.33
CNOT2-243ENST00000553078 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
CNOT2-243ENST00000553078 EIF4A2Q14240 407 aaKnown RBP13□□□□□ -0.33
CNOT2-243ENST00000553078 SULT6B1Q6IMI4 303 aa13□□□□□ -0.33
CNOT2-243ENST00000553078 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
CNOT2-243ENST00000553078 ITPRIPQ8IWB1 547 aa13□□□□□ -0.33
CNOT2-243ENST00000553078 GAS2L2Q8NHY3 880 aa13□□□□□ -0.33
CNOT2-243ENST00000553078 RTF1Q92541 710 aaKnown RBP13□□□□□ -0.33
CNOT2-243ENST00000553078 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
CNOT2-243ENST00000553078 CHD2O14647 1828 aaKnown RBP12.99□□□□□ -0.33
CNOT2-243ENST00000553078 USP54Q70EL1 1684 aa12.99□□□□□ -0.33
CNOT2-243ENST00000553078 SOX12O15370 315 aa12.99□□□□□ -0.33
CNOT2-243ENST00000553078 PAK3O75914 559 aaPredicted RBP12.99□□□□□ -0.33
CNOT2-243ENST00000553078 NLRP6P59044 892 aa12.99□□□□□ -0.33
CNOT2-243ENST00000553078 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
CNOT2-243ENST00000553078 SETD1BQ9UPS6 1966 aaKnown RBP12.98□□□□□ -0.33
CNOT2-243ENST00000553078 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
CNOT2-243ENST00000553078 BACH2Q9BYV9 841 aa12.98□□□□□ -0.33
CNOT2-243ENST00000553078 PHF8Q9UPP1 1060 aa12.98□□□□□ -0.33
CNOT2-243ENST00000553078 NOP58Q9Y2X3 529 aaKnown RBP12.98□□□□□ -0.33
CNOT2-243ENST00000553078 MAP3K19Q56UN5 1328 aa12.97□□□□□ -0.33
CNOT2-243ENST00000553078 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
CNOT2-243ENST00000553078 FBLN1P23142 703 aa12.97□□□□□ -0.33
CNOT2-243ENST00000553078 RGS3P49796 1198 aa12.97□□□□□ -0.33
CNOT2-243ENST00000553078 SSH1Q8WYL5 1049 aa12.97□□□□□ -0.33
CNOT2-243ENST00000553078 IPO9Q96P70 1041 aaKnown RBP12.97□□□□□ -0.33
CNOT2-243ENST00000553078 API5Q9BZZ5 524 aaKnown RBP12.97□□□□□ -0.33
CNOT2-243ENST00000553078 DAXXQ9UER7 740 aaPredicted RBP12.97□□□□□ -0.33
CNOT2-243ENST00000553078 ZBTB47Q9UFB7 747 aaPredicted RBP12.97□□□□□ -0.33
CNOT2-243ENST00000553078 NWD1Q149M9 1564 aa12.97□□□□□ -0.33
CNOT2-243ENST00000553078 BRPF1P55201 1214 aaPredicted RBP12.96□□□□□ -0.33
CNOT2-243ENST00000553078 NPM2Q86SE8 214 aaKnown RBP12.96□□□□□ -0.33
CNOT2-243ENST00000553078 ABTB2Q8N961 1025 aa12.96□□□□□ -0.33
CNOT2-243ENST00000553078 TRIM27P14373 513 aa12.95□□□□□ -0.34
CNOT2-243ENST00000553078 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
CNOT2-243ENST00000553078 KCNH5Q8NCM2 988 aa12.95□□□□□ -0.34
CNOT2-243ENST00000553078 ARHGAP45Q92619 1136 aa12.95□□□□□ -0.34
CNOT2-243ENST00000553078 PHACTR3Q96KR7 559 aa12.95□□□□□ -0.34
CNOT2-243ENST00000553078 UPF2Q9HAU5 1272 aaKnown RBP12.95□□□□□ -0.34
CNOT2-243ENST00000553078 NOB1Q9ULX3 412 aaKnown RBP12.95□□□□□ -0.34
CNOT2-243ENST00000553078 RGPD1P0DJD0 1748 aa12.94□□□□□ -0.34
CNOT2-243ENST00000553078 PEAK1Q9H792 1746 aa12.94□□□□□ -0.34
CNOT2-243ENST00000553078 PSME1Q06323 249 aa12.94□□□□□ -0.34
CNOT2-243ENST00000553078 MBIPQ9NS73 344 aa12.94□□□□□ -0.34
CNOT2-243ENST00000553078 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
CNOT2-243ENST00000553078 HSP90AB2PQ58FF8 381 aa12.93□□□□□ -0.34
CNOT2-243ENST00000553078 RGPD8O14715 1765 aaPredicted RBP12.93□□□□□ -0.34
CNOT2-243ENST00000553078 IGSF1Q8N6C5 1336 aa12.92□□□□□ -0.34
CNOT2-243ENST00000553078 HTATSF1O43719 755 aaKnown RBP12.92□□□□□ -0.34
CNOT2-243ENST00000553078 ZNF853P0CG23 659 aa12.92□□□□□ -0.34
CNOT2-243ENST00000553078 RLBP1P12271 317 aa12.92□□□□□ -0.34
CNOT2-243ENST00000553078 ESCO1Q5FWF5 840 aa12.92□□□□□ -0.34
CNOT2-243ENST00000553078 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
CNOT2-243ENST00000553078 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
CNOT2-243ENST00000553078 CHMP4AQ9BY43 222 aa12.91□□□□□ -0.34
CNOT2-243ENST00000553078 DLG5Q8TDM6 1919 aa12.91□□□□□ -0.34
CNOT2-243ENST00000553078 KDRP35968 1356 aa12.91□□□□□ -0.34
CNOT2-243ENST00000553078 VAMP4O75379 141 aa12.9□□□□□ -0.34
CNOT2-243ENST00000553078 HOXC9P31274 260 aa12.9□□□□□ -0.34
CNOT2-243ENST00000553078 HDAC1Q13547 482 aaPredicted RBP12.9□□□□□ -0.34
CNOT2-243ENST00000553078 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
CNOT2-243ENST00000553078 TMEM57Q8N5G2 664 aa12.9□□□□□ -0.34
CNOT2-243ENST00000553078 MRPL50Q8N5N7 158 aaKnown RBP12.9□□□□□ -0.34
CNOT2-243ENST00000553078 SOS1Q07889 1333 aaPredicted RBP12.89□□□□□ -0.35
CNOT2-243ENST00000553078 IGHDP01880 384 aa12.89□□□□□ -0.35
CNOT2-243ENST00000553078 PROSER2Q86WR7 435 aaPredicted RBP12.89□□□□□ -0.35
CNOT2-243ENST00000553078 TSPYL4Q9UJ04 414 aa12.89□□□□□ -0.35
CNOT2-243ENST00000553078 PTPRCP08575 1304 aa12.88□□□□□ -0.35
CNOT2-243ENST00000553078 NUTM2GQ5VZR2 741 aa12.88□□□□□ -0.35
CNOT2-243ENST00000553078 DNAJC5Q9H3Z4 198 aa12.88□□□□□ -0.35
CNOT2-243ENST00000553078 MAP3K5Q99683 1374 aa12.88□□□□□ -0.35
CNOT2-243ENST00000553078 DCCP43146 1447 aa12.88□□□□□ -0.35
CNOT2-243ENST00000553078 FAM83GA6ND36 823 aa12.87□□□□□ -0.35
CNOT2-243ENST00000553078 EIF5BO60841 1220 aaKnown RBP12.87□□□□□ -0.35
CNOT2-243ENST00000553078 EYA1Q99502 592 aa12.87□□□□□ -0.35
CNOT2-243ENST00000553078 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
CNOT2-243ENST00000553078 TNNQ9UQP3 1299 aa12.87□□□□□ -0.35
CNOT2-243ENST00000553078 PCDHB15Q9Y5E8 787 aa12.87□□□□□ -0.35
CNOT2-243ENST00000553078 NCOA3Q9Y6Q9 1424 aa12.87□□□□□ -0.35
CNOT2-243ENST00000553078 ABCC4O15439 1325 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms