RNA–Protein interactions for RNA: ENST00000552862.1

CDK4-214, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-214ENST00000552862 CCDC7Q96M83 1385 aa17.66■□□□□ 0.42
CDK4-214ENST00000552862 CARD11Q9BXL7 1154 aa17.66■□□□□ 0.42
CDK4-214ENST00000552862 SPON1Q9HCB6 807 aa17.66■□□□□ 0.42
CDK4-214ENST00000552862 COL5A2P05997 1499 aaPredicted RBP17.66■□□□□ 0.42
CDK4-214ENST00000552862 KTN1Q86UP2 1357 aaKnown RBP17.66■□□□□ 0.42
CDK4-214ENST00000552862 PPP1R1BQ9UD71 204 aaPredicted RBP17.65■□□□□ 0.42
CDK4-214ENST00000552862 BCL9O00512 1426 aa17.64■□□□□ 0.41
CDK4-214ENST00000552862 NRKQ7Z2Y5 1582 aa17.63■□□□□ 0.41
CDK4-214ENST00000552862 SIN3AQ96ST3 1273 aa17.62■□□□□ 0.41
CDK4-214ENST00000552862 TONSLQ96HA7 1378 aa17.62■□□□□ 0.41
CDK4-214ENST00000552862 NINLQ9Y2I6 1382 aa17.62■□□□□ 0.41
CDK4-214ENST00000552862 TRPM1Q7Z4N2 1603 aa17.61■□□□□ 0.41
CDK4-214ENST00000552862 SLIT3O75094 1523 aa17.61■□□□□ 0.41
CDK4-214ENST00000552862 QRICH2Q9H0J4 1663 aa17.61■□□□□ 0.41
CDK4-214ENST00000552862 KCNQ2O43526 872 aa17.6■□□□□ 0.41
CDK4-214ENST00000552862 TMC1Q8TDI8 760 aa17.6■□□□□ 0.41
CDK4-214ENST00000552862 CPSF1Q10570 1443 aaKnown RBP17.6■□□□□ 0.41
CDK4-214ENST00000552862 ABCC6O95255 1503 aa17.6■□□□□ 0.41
CDK4-214ENST00000552862 LMO7Q8WWI1 1683 aa17.59■□□□□ 0.41
CDK4-214ENST00000552862 USP31Q70CQ4 1352 aa17.59■□□□□ 0.41
CDK4-214ENST00000552862 CDCA8Q53HL2 280 aa17.59■□□□□ 0.41
CDK4-214ENST00000552862 PARP4Q9UKK3 1724 aaKnown RBP17.57■□□□□ 0.4
CDK4-214ENST00000552862 STK32BQ9NY57 414 aa17.56■□□□□ 0.4
CDK4-214ENST00000552862 AXIN2Q9Y2T1 843 aa17.56■□□□□ 0.4
CDK4-214ENST00000552862 IL2RBP14784 551 aa17.55■□□□□ 0.4
CDK4-214ENST00000552862 NLRP2Q9NX02 1062 aa17.55■□□□□ 0.4
CDK4-214ENST00000552862 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.54■□□□□ 0.4
CDK4-214ENST00000552862 TNS1Q9HBL0 1735 aaKnown RBP17.53■□□□□ 0.4
CDK4-214ENST00000552862 SOX12O15370 315 aa17.53■□□□□ 0.4
CDK4-214ENST00000552862 COG3Q96JB2 828 aa17.53■□□□□ 0.4
CDK4-214ENST00000552862 EDC4Q6P2E9 1401 aaKnown RBP17.53■□□□□ 0.4
CDK4-214ENST00000552862 MARCH10Q8NA82 808 aaPredicted RBP17.52■□□□□ 0.4
CDK4-214ENST00000552862 TIMELESSQ9UNS1 1208 aa17.51■□□□□ 0.39
CDK4-214ENST00000552862 ERBB3P21860 1342 aa17.5■□□□□ 0.39
CDK4-214ENST00000552862 TMF1P82094 1093 aa17.49■□□□□ 0.39
CDK4-214ENST00000552862 TXNRD1Q16881 649 aa17.49■□□□□ 0.39
CDK4-214ENST00000552862 IP6K1Q92551 441 aa17.49■□□□□ 0.39
CDK4-214ENST00000552862 CGNL1Q0VF96 1302 aa17.48■□□□□ 0.39
CDK4-214ENST00000552862 RGPD3A6NKT7 1758 aaPredicted RBP17.48■□□□□ 0.39
CDK4-214ENST00000552862 RGPD4Q7Z3J3 1758 aa17.48■□□□□ 0.39
CDK4-214ENST00000552862 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
CDK4-214ENST00000552862 SLC12A5Q9H2X9 1139 aa17.48■□□□□ 0.39
CDK4-214ENST00000552862 SLC15A2Q16348 729 aa17.47■□□□□ 0.39
CDK4-214ENST00000552862 SLC27A3Q5K4L6 730 aa17.47■□□□□ 0.39
CDK4-214ENST00000552862 SLC16A10Q8TF71 515 aa17.47■□□□□ 0.39
CDK4-214ENST00000552862 PIK3C2AO00443 1686 aa17.47■□□□□ 0.39
CDK4-214ENST00000552862 AMPHP49418 695 aa17.46■□□□□ 0.39
CDK4-214ENST00000552862 MTFR1LQ9H019 292 aa17.46■□□□□ 0.39
CDK4-214ENST00000552862 AKAP12Q02952 1782 aa17.45■□□□□ 0.38
CDK4-214ENST00000552862 NME9Q86XW9 330 aa17.45■□□□□ 0.38
CDK4-214ENST00000552862 TNS2Q63HR2 1409 aa17.45■□□□□ 0.38
CDK4-214ENST00000552862 RREB1Q92766 1687 aa17.45■□□□□ 0.38
CDK4-214ENST00000552862 COL18A1P39060 1754 aa17.44■□□□□ 0.38
CDK4-214ENST00000552862 YY1P25490 414 aa17.44■□□□□ 0.38
CDK4-214ENST00000552862 TRIM26Q12899 539 aaPredicted RBP17.44■□□□□ 0.38
CDK4-214ENST00000552862 ST20-MTHFSA0A0A6YYL1 179 aa17.42■□□□□ 0.38
CDK4-214ENST00000552862 NFAT5O94916 1531 aa17.42■□□□□ 0.38
CDK4-214ENST00000552862 PROM2Q8N271 834 aa17.41■□□□□ 0.38
CDK4-214ENST00000552862 LRRC37A3O60309 1634 aa17.4■□□□□ 0.38
CDK4-214ENST00000552862 SMG6Q86US8 1419 aaKnown RBP17.4■□□□□ 0.38
CDK4-214ENST00000552862 POLD1P28340 1107 aa17.4■□□□□ 0.38
CDK4-214ENST00000552862 PEAK1Q9H792 1746 aa17.4■□□□□ 0.38
CDK4-214ENST00000552862 A0A1W2PP64 1363 aa17.4■□□□□ 0.38
CDK4-214ENST00000552862 KIF24Q5T7B8 1368 aa17.4■□□□□ 0.38
CDK4-214ENST00000552862 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
CDK4-214ENST00000552862 RAPGEF4Q8WZA2 1011 aa17.39■□□□□ 0.37
CDK4-214ENST00000552862 ANKRD36BQ8N2N9 1353 aa17.39■□□□□ 0.37
CDK4-214ENST00000552862 NUP188Q5SRE5 1749 aa17.38■□□□□ 0.37
CDK4-214ENST00000552862 MON2Q7Z3U7 1717 aa17.38■□□□□ 0.37
CDK4-214ENST00000552862 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
CDK4-214ENST00000552862 CLSPNQ9HAW4 1339 aa17.38■□□□□ 0.37
CDK4-214ENST00000552862 RTL1A6NKG5 1358 aa17.38■□□□□ 0.37
CDK4-214ENST00000552862 TESK2Q96S53 571 aa17.37■□□□□ 0.37
CDK4-214ENST00000552862 USP54Q70EL1 1684 aa17.36■□□□□ 0.37
CDK4-214ENST00000552862 SBF2Q86WG5 1849 aa17.36■□□□□ 0.37
CDK4-214ENST00000552862 FLAD1Q8NFF5 587 aa17.36■□□□□ 0.37
CDK4-214ENST00000552862 ZBTB7AO95365 584 aa17.35■□□□□ 0.37
CDK4-214ENST00000552862 HOXC9P31274 260 aa17.35■□□□□ 0.37
CDK4-214ENST00000552862 ACSBG1Q96GR2 724 aa17.35■□□□□ 0.37
CDK4-214ENST00000552862 CD163L1Q9NR16 1453 aa17.35■□□□□ 0.37
CDK4-214ENST00000552862 TATP17735 454 aaPredicted RBP17.34■□□□□ 0.37
CDK4-214ENST00000552862 SYTL4Q96C24 671 aaPredicted RBP17.34■□□□□ 0.37
CDK4-214ENST00000552862 LTV1Q96GA3 475 aaPredicted RBP17.34■□□□□ 0.37
CDK4-214ENST00000552862 ARXQ96QS3 562 aa17.34■□□□□ 0.37
CDK4-214ENST00000552862 ANO8Q9HCE9 1232 aaPredicted RBP17.34■□□□□ 0.37
CDK4-214ENST00000552862 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
CDK4-214ENST00000552862 SYT17Q9BSW7 474 aa17.33■□□□□ 0.36
CDK4-214ENST00000552862 TFCP2L1Q9NZI6 479 aa17.33■□□□□ 0.36
CDK4-214ENST00000552862 MAP3K19Q56UN5 1328 aa17.32■□□□□ 0.36
CDK4-214ENST00000552862 FAM208AQ9UK61 1670 aaKnown RBP17.32■□□□□ 0.36
CDK4-214ENST00000552862 MAP3K5Q99683 1374 aa17.31■□□□□ 0.36
CDK4-214ENST00000552862 FYB1O15117 783 aa17.31■□□□□ 0.36
CDK4-214ENST00000552862 PTGER2P43116 358 aa17.31■□□□□ 0.36
CDK4-214ENST00000552862 SMARCC1Q92922 1105 aaPredicted RBP17.31■□□□□ 0.36
CDK4-214ENST00000552862 WNK3Q9BYP7 1800 aa17.31■□□□□ 0.36
CDK4-214ENST00000552862 USP47Q96K76 1375 aa17.3■□□□□ 0.36
CDK4-214ENST00000552862 PCDH11XQ9BZA7 1347 aa17.29■□□□□ 0.36
CDK4-214ENST00000552862 PCDH11YQ9BZA8 1340 aa17.29■□□□□ 0.36
CDK4-214ENST00000552862 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
CDK4-214ENST00000552862 PTF1AQ7RTS3 328 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms