RNA–Protein interactions for RNA: ENST00000552645.5

LETMD1-234, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best)

Gene LETMD1, Length 1,623 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-234ENST00000552645 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
LETMD1-234ENST00000552645 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.56□□□□□ -0.24
LETMD1-234ENST00000552645 LMO7Q8WWI1 1683 aa13.55□□□□□ -0.24
LETMD1-234ENST00000552645 CAMTA1Q9Y6Y1 1673 aa13.55□□□□□ -0.24
LETMD1-234ENST00000552645 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
LETMD1-234ENST00000552645 RRS1Q15050 365 aaKnown RBP13.55□□□□□ -0.24
LETMD1-234ENST00000552645 CC2D1BQ5T0F9 858 aaKnown RBP13.55□□□□□ -0.24
LETMD1-234ENST00000552645 COL18A1P39060 1754 aa13.54□□□□□ -0.24
LETMD1-234ENST00000552645 PPM1GO15355 546 aaPredicted RBP13.54□□□□□ -0.24
LETMD1-234ENST00000552645 RXRBP28702 533 aa13.54□□□□□ -0.24
LETMD1-234ENST00000552645 AMPHP49418 695 aa13.54□□□□□ -0.24
LETMD1-234ENST00000552645 DDX10Q13206 875 aaKnown RBP13.54□□□□□ -0.24
LETMD1-234ENST00000552645 MORC1Q86VD1 984 aa13.54□□□□□ -0.24
LETMD1-234ENST00000552645 AXIN2Q9Y2T1 843 aa13.54□□□□□ -0.24
LETMD1-234ENST00000552645 AATKQ6ZMQ8 1374 aa13.54□□□□□ -0.24
LETMD1-234ENST00000552645 USP35Q9P2H5 1018 aa13.53□□□□□ -0.24
LETMD1-234ENST00000552645 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
LETMD1-234ENST00000552645 ATRNO75882 1429 aa13.53□□□□□ -0.24
LETMD1-234ENST00000552645 PER1O15534 1290 aaPredicted RBP13.53□□□□□ -0.24
LETMD1-234ENST00000552645 CSB-PGBD3P0DP91 1061 aa13.53□□□□□ -0.24
LETMD1-234ENST00000552645 AMER1Q5JTC6 1135 aaPredicted RBP13.53□□□□□ -0.24
LETMD1-234ENST00000552645 LTV1Q96GA3 475 aaPredicted RBP13.53□□□□□ -0.24
LETMD1-234ENST00000552645 NSD2O96028 1365 aa13.53□□□□□ -0.24
LETMD1-234ENST00000552645 RBM6P78332 1123 aaKnown RBP13.52□□□□□ -0.25
LETMD1-234ENST00000552645 VPS72Q15906 364 aa13.52□□□□□ -0.25
LETMD1-234ENST00000552645 LARP1Q6PKG0 1096 aaKnown RBP13.52□□□□□ -0.25
LETMD1-234ENST00000552645 GJD4Q96KN9 370 aaPredicted RBP13.52□□□□□ -0.25
LETMD1-234ENST00000552645 COL5A2P05997 1499 aaPredicted RBP13.52□□□□□ -0.25
LETMD1-234ENST00000552645 A0A0G2JS52 829 aa13.51□□□□□ -0.25
LETMD1-234ENST00000552645 ILDR2Q71H61 639 aa13.51□□□□□ -0.25
LETMD1-234ENST00000552645 TOM1L2Q6ZVM7 507 aa13.5□□□□□ -0.25
LETMD1-234ENST00000552645 EMILIN1Q9Y6C2 1016 aa13.5□□□□□ -0.25
LETMD1-234ENST00000552645 GLI3P10071 1580 aa13.49□□□□□ -0.25
LETMD1-234ENST00000552645 PEAK1Q9H792 1746 aa13.49□□□□□ -0.25
LETMD1-234ENST00000552645 HOXC9P31274 260 aa13.49□□□□□ -0.25
LETMD1-234ENST00000552645 FAM98CQ17RN3 349 aaKnown RBP13.49□□□□□ -0.25
LETMD1-234ENST00000552645 ANKRD24Q8TF21 1146 aa13.49□□□□□ -0.25
LETMD1-234ENST00000552645 IP6K1Q92551 441 aa13.49□□□□□ -0.25
LETMD1-234ENST00000552645 SPATA31A5Q5VU36 1347 aa13.48□□□□□ -0.25
LETMD1-234ENST00000552645 SPATA31A7Q8IWB4 1347 aa13.48□□□□□ -0.25
LETMD1-234ENST00000552645 ABCC6O95255 1503 aa13.48□□□□□ -0.25
LETMD1-234ENST00000552645 NLRP2Q9NX02 1062 aa13.47□□□□□ -0.25
LETMD1-234ENST00000552645 RGPD2P0DJD1 1756 aa13.47□□□□□ -0.25
LETMD1-234ENST00000552645 SPATA31A1Q5TZJ5 1347 aa13.47□□□□□ -0.25
LETMD1-234ENST00000552645 WDR17Q8IZU2 1322 aa13.47□□□□□ -0.25
LETMD1-234ENST00000552645 BLMP54132 1417 aaPredicted RBP13.46□□□□□ -0.25
LETMD1-234ENST00000552645 CRB1P82279 1406 aa13.46□□□□□ -0.25
LETMD1-234ENST00000552645 HSP90AB2PQ58FF8 381 aa13.46□□□□□ -0.25
LETMD1-234ENST00000552645 POLKQ9UBT6 870 aa13.46□□□□□ -0.25
LETMD1-234ENST00000552645 ERBB3P21860 1342 aa13.46□□□□□ -0.25
LETMD1-234ENST00000552645 RTL1A6NKG5 1358 aa13.46□□□□□ -0.25
LETMD1-234ENST00000552645 FLT4P35916 1363 aa13.46□□□□□ -0.25
LETMD1-234ENST00000552645 RGS12O14924 1447 aa13.45□□□□□ -0.26
LETMD1-234ENST00000552645 TCP11L2Q8N4U5 519 aa13.45□□□□□ -0.26
LETMD1-234ENST00000552645 BRWD3Q6RI45 1802 aa13.45□□□□□ -0.26
LETMD1-234ENST00000552645 SMG6Q86US8 1419 aaKnown RBP13.44□□□□□ -0.26
LETMD1-234ENST00000552645 SEPT12Q8IYM1 358 aa13.44□□□□□ -0.26
LETMD1-234ENST00000552645 FAM208AQ9UK61 1670 aaKnown RBP13.44□□□□□ -0.26
LETMD1-234ENST00000552645 NPC1L1Q9UHC9 1359 aa13.44□□□□□ -0.26
LETMD1-234ENST00000552645 YTHDC1Q96MU7 727 aaKnown RBP13.43□□□□□ -0.26
LETMD1-234ENST00000552645 INSRP06213 1382 aa13.43□□□□□ -0.26
LETMD1-234ENST00000552645 MIER1Q8N108 512 aa13.42□□□□□ -0.26
LETMD1-234ENST00000552645 CARD10Q9BWT7 1032 aa13.42□□□□□ -0.26
LETMD1-234ENST00000552645 KIF24Q5T7B8 1368 aa13.42□□□□□ -0.26
LETMD1-234ENST00000552645 CDK12Q9NYV4 1490 aaPredicted RBP13.42□□□□□ -0.26
LETMD1-234ENST00000552645 MTHFSP49914 203 aa13.42□□□□□ -0.26
LETMD1-234ENST00000552645 USHBP1Q8N6Y0 703 aa13.42□□□□□ -0.26
LETMD1-234ENST00000552645 SUPT16HQ9Y5B9 1047 aaKnown RBP13.42□□□□□ -0.26
LETMD1-234ENST00000552645 WNK3Q9BYP7 1800 aa13.41□□□□□ -0.26
LETMD1-234ENST00000552645 THRAP3Q9Y2W1 955 aaKnown RBP13.41□□□□□ -0.26
LETMD1-234ENST00000552645 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
LETMD1-234ENST00000552645 NBPF6Q5VWK0 638 aa13.39□□□□□ -0.27
LETMD1-234ENST00000552645 BARGINQ6ZT62 677 aa13.39□□□□□ -0.27
LETMD1-234ENST00000552645 NBPF4Q96M43 638 aa13.39□□□□□ -0.27
LETMD1-234ENST00000552645 THSD7AQ9UPZ6 1657 aa13.39□□□□□ -0.27
LETMD1-234ENST00000552645 ONECUT3O60422 494 aaPredicted RBP13.39□□□□□ -0.27
LETMD1-234ENST00000552645 EIF4A2Q14240 407 aaKnown RBP13.39□□□□□ -0.27
LETMD1-234ENST00000552645 PPP2R1AP30153 589 aa13.38□□□□□ -0.27
LETMD1-234ENST00000552645 FAM182BQ5T319 152 aa13.38□□□□□ -0.27
LETMD1-234ENST00000552645 KRT27Q7Z3Y8 459 aa13.38□□□□□ -0.27
LETMD1-234ENST00000552645 EP400Q96L91 3159 aa13.37□□□□□ -0.27
LETMD1-234ENST00000552645 IL2RBP14784 551 aa13.37□□□□□ -0.27
LETMD1-234ENST00000552645 PDE3BQ13370 1112 aa13.37□□□□□ -0.27
LETMD1-234ENST00000552645 PARP4Q9UKK3 1724 aaKnown RBP13.37□□□□□ -0.27
LETMD1-234ENST00000552645 KAT6BQ8WYB5 2073 aa13.36□□□□□ -0.27
LETMD1-234ENST00000552645 DDB1Q16531 1140 aa13.36□□□□□ -0.27
LETMD1-234ENST00000552645 LRRC37A3O60309 1634 aa13.36□□□□□ -0.27
LETMD1-234ENST00000552645 PARD3Q8TEW0 1356 aa13.36□□□□□ -0.27
LETMD1-234ENST00000552645 RAPGEF4Q8WZA2 1011 aa13.35□□□□□ -0.27
LETMD1-234ENST00000552645 CFAP53Q96M91 514 aa13.35□□□□□ -0.27
LETMD1-234ENST00000552645 EYA1Q99502 592 aa13.35□□□□□ -0.27
LETMD1-234ENST00000552645 CDCA7Q9BWT1 371 aaPredicted RBP13.35□□□□□ -0.27
LETMD1-234ENST00000552645 EXOC5O00471 708 aa13.35□□□□□ -0.27
LETMD1-234ENST00000552645 DIAPH1O60610 1272 aaKnown RBP13.34□□□□□ -0.27
LETMD1-234ENST00000552645 RALBP1Q15311 655 aa13.34□□□□□ -0.27
LETMD1-234ENST00000552645 DISP2A7MBM2 1401 aa13.33□□□□□ -0.28
LETMD1-234ENST00000552645 U2SURPO15042 1029 aaKnown RBP13.33□□□□□ -0.28
LETMD1-234ENST00000552645 MEGF6O75095 1541 aa13.33□□□□□ -0.28
LETMD1-234ENST00000552645 TATP17735 454 aaPredicted RBP13.32□□□□□ -0.28
LETMD1-234ENST00000552645 IL13P35225 146 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms