RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 DEPDC5O75140 1603 aa10.49□□□□□ -0.73
CHPT1-208ENST00000552215 MYL6BP14649 208 aa10.49□□□□□ -0.73
CHPT1-208ENST00000552215 PDE3BQ13370 1112 aa10.49□□□□□ -0.73
CHPT1-208ENST00000552215 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
CHPT1-208ENST00000552215 MTHFSDQ2M296 383 aaKnown RBP10.48□□□□□ -0.73
CHPT1-208ENST00000552215 TMEM131LA2VDJ0 1609 aa10.48□□□□□ -0.73
CHPT1-208ENST00000552215 ASXL1Q8IXJ9 1541 aa10.48□□□□□ -0.73
CHPT1-208ENST00000552215 FCHSD2O94868 740 aa10.48□□□□□ -0.73
CHPT1-208ENST00000552215 EXOC6Q8TAG9 804 aa10.48□□□□□ -0.73
CHPT1-208ENST00000552215 STK31Q9BXU1 1019 aa10.48□□□□□ -0.73
CHPT1-208ENST00000552215 TTC21AQ8NDW8 1320 aa10.48□□□□□ -0.73
CHPT1-208ENST00000552215 KIAA0232Q92628 1395 aa10.48□□□□□ -0.73
CHPT1-208ENST00000552215 CABP4P57796 275 aa10.47□□□□□ -0.73
CHPT1-208ENST00000552215 TRPM1Q7Z4N2 1603 aa10.47□□□□□ -0.73
CHPT1-208ENST00000552215 PARD3Q8TEW0 1356 aa10.47□□□□□ -0.73
CHPT1-208ENST00000552215 C3P01024 1663 aa10.47□□□□□ -0.73
CHPT1-208ENST00000552215 E9PSI1 815 aa10.47□□□□□ -0.73
CHPT1-208ENST00000552215 HSPA1LP34931 641 aa10.47□□□□□ -0.73
CHPT1-208ENST00000552215 NFE2L2Q16236 605 aa10.47□□□□□ -0.73
CHPT1-208ENST00000552215 SIRT1Q96EB6 747 aa10.47□□□□□ -0.73
CHPT1-208ENST00000552215 CHMP3Q9Y3E7 222 aa10.46□□□□□ -0.73
CHPT1-208ENST00000552215 KCNQ4P56696 695 aa10.46□□□□□ -0.74
CHPT1-208ENST00000552215 LMOD3Q0VAK6 560 aa10.46□□□□□ -0.74
CHPT1-208ENST00000552215 CERKQ8TCT0 537 aa10.46□□□□□ -0.74
CHPT1-208ENST00000552215 LGR6Q9HBX8 967 aa10.46□□□□□ -0.74
CHPT1-208ENST00000552215 ADGRL3Q9HAR2 1447 aa10.46□□□□□ -0.74
CHPT1-208ENST00000552215 SMG6Q86US8 1419 aaKnown RBP10.46□□□□□ -0.74
CHPT1-208ENST00000552215 GAS2L2Q8NHY3 880 aa10.45□□□□□ -0.74
CHPT1-208ENST00000552215 SBNO2Q9Y2G9 1366 aa10.45□□□□□ -0.74
CHPT1-208ENST00000552215 FKBP5Q13451 457 aaPredicted RBP10.45□□□□□ -0.74
CHPT1-208ENST00000552215 BTBD11A6QL63 1104 aa10.45□□□□□ -0.74
CHPT1-208ENST00000552215 IL13P35225 146 aa10.45□□□□□ -0.74
CHPT1-208ENST00000552215 IP6K1Q92551 441 aa10.45□□□□□ -0.74
CHPT1-208ENST00000552215 CRBNQ96SW2 442 aa10.45□□□□□ -0.74
CHPT1-208ENST00000552215 GNAT3A8MTJ3 354 aa10.44□□□□□ -0.74
CHPT1-208ENST00000552215 EXOC5O00471 708 aa10.44□□□□□ -0.74
CHPT1-208ENST00000552215 EDC4Q6P2E9 1401 aaKnown RBP10.44□□□□□ -0.74
CHPT1-208ENST00000552215 NFATC2IPQ8NCF5 419 aa10.44□□□□□ -0.74
CHPT1-208ENST00000552215 C1orf115Q9H7X2 142 aa10.44□□□□□ -0.74
CHPT1-208ENST00000552215 TWISTNBQ3B726 338 aaPredicted RBP10.44□□□□□ -0.74
CHPT1-208ENST00000552215 CALD1Q05682 793 aaKnown RBP10.43□□□□□ -0.74
CHPT1-208ENST00000552215 C20orf194Q5TEA3 1177 aa10.43□□□□□ -0.74
CHPT1-208ENST00000552215 SPG7Q9UQ90 795 aa10.43□□□□□ -0.74
CHPT1-208ENST00000552215 USP6P35125 1406 aa10.43□□□□□ -0.74
CHPT1-208ENST00000552215 SLC4A2P04920 1241 aa10.43□□□□□ -0.74
CHPT1-208ENST00000552215 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
CHPT1-208ENST00000552215 KLHL34Q8N239 644 aa10.43□□□□□ -0.74
CHPT1-208ENST00000552215 JARID2Q92833 1246 aaPredicted RBP10.43□□□□□ -0.74
CHPT1-208ENST00000552215 TULP4Q9NRJ4 1543 aa10.43□□□□□ -0.74
CHPT1-208ENST00000552215 GNAI1P63096 354 aa10.42□□□□□ -0.74
CHPT1-208ENST00000552215 FAM135BQ49AJ0 1406 aa10.42□□□□□ -0.74
CHPT1-208ENST00000552215 TNNQ9UQP3 1299 aa10.42□□□□□ -0.74
CHPT1-208ENST00000552215 TSPYL6Q8N831 410 aa10.42□□□□□ -0.74
CHPT1-208ENST00000552215 USP21Q9UK80 565 aa10.42□□□□□ -0.74
CHPT1-208ENST00000552215 NINLQ9Y2I6 1382 aa10.42□□□□□ -0.74
CHPT1-208ENST00000552215 WWC3Q9ULE0 1092 aa10.42□□□□□ -0.74
CHPT1-208ENST00000552215 F6X3S4 739 aa10.42□□□□□ -0.74
CHPT1-208ENST00000552215 CCDC85AQ96PX6 553 aaPredicted RBP10.42□□□□□ -0.74
CHPT1-208ENST00000552215 FLT4P35916 1363 aa10.41□□□□□ -0.74
CHPT1-208ENST00000552215 HDGFL1Q5TGJ6 251 aa10.41□□□□□ -0.74
CHPT1-208ENST00000552215 PUS7Q96PZ0 661 aaKnown RBP10.41□□□□□ -0.74
CHPT1-208ENST00000552215 RSPH6AQ9H0K4 717 aa10.41□□□□□ -0.74
CHPT1-208ENST00000552215 ADGRB1O14514 1584 aa10.41□□□□□ -0.74
CHPT1-208ENST00000552215 ARHGEF25Q86VW2 580 aa10.41□□□□□ -0.74
CHPT1-208ENST00000552215 ZCRB1Q8TBF4 217 aaKnown RBP10.41□□□□□ -0.74
CHPT1-208ENST00000552215 ZC3H13Q5T200 1668 aaKnown RBP10.41□□□□□ -0.74
CHPT1-208ENST00000552215 KCNQ3O43525 872 aa10.41□□□□□ -0.74
CHPT1-208ENST00000552215 OS9Q13438 667 aaPredicted RBP10.41□□□□□ -0.74
CHPT1-208ENST00000552215 BICDL1Q6ZP65 573 aa10.4□□□□□ -0.74
CHPT1-208ENST00000552215 C1orf167Q5SNV9 1468 aa10.4□□□□□ -0.74
CHPT1-208ENST00000552215 MBIPQ9NS73 344 aa10.4□□□□□ -0.74
CHPT1-208ENST00000552215 NOB1Q9ULX3 412 aaKnown RBP10.4□□□□□ -0.74
CHPT1-208ENST00000552215 SPATA31A3Q5VYP0 1347 aa10.4□□□□□ -0.74
CHPT1-208ENST00000552215 PIK3R4Q99570 1358 aa10.4□□□□□ -0.74
CHPT1-208ENST00000552215 GTF2E1P29083 439 aaPredicted RBP10.4□□□□□ -0.74
CHPT1-208ENST00000552215 DDB1Q16531 1140 aa10.4□□□□□ -0.74
CHPT1-208ENST00000552215 RRP1P56182 461 aaKnown RBP10.39□□□□□ -0.75
CHPT1-208ENST00000552215 DUSP27Q5VZP5 1158 aa10.39□□□□□ -0.75
CHPT1-208ENST00000552215 C8orf58Q8NAV2 365 aa10.39□□□□□ -0.75
CHPT1-208ENST00000552215 SLFN5Q08AF3 891 aa10.39□□□□□ -0.75
CHPT1-208ENST00000552215 IL2RBP14784 551 aa10.39□□□□□ -0.75
CHPT1-208ENST00000552215 TMOD3Q9NYL9 352 aa10.39□□□□□ -0.75
CHPT1-208ENST00000552215 PPP1R1BQ9UD71 204 aaPredicted RBP10.38□□□□□ -0.75
CHPT1-208ENST00000552215 FANCIQ9NVI1 1328 aa10.38□□□□□ -0.75
CHPT1-208ENST00000552215 SSH1Q8WYL5 1049 aa10.38□□□□□ -0.75
CHPT1-208ENST00000552215 NSD2O96028 1365 aa10.38□□□□□ -0.75
CHPT1-208ENST00000552215 CPS1P31327 1500 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 IPO8O15397 1037 aaKnown RBP10.37□□□□□ -0.75
CHPT1-208ENST00000552215 KDM5AP29375 1690 aaKnown RBP10.37□□□□□ -0.75
CHPT1-208ENST00000552215 QRICH2Q9H0J4 1663 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 PRIM1P49642 420 aaKnown RBP10.37□□□□□ -0.75
CHPT1-208ENST00000552215 RIC3Q7Z5B4 369 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 IFNL2Q8IZJ0 200 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 PHF14O94880 888 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
CHPT1-208ENST00000552215 ZKSCAN2Q63HK3 967 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 MYO3AQ8NEV4 1616 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 REREQ9P2R6 1566 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 PPLO60437 1756 aa10.37□□□□□ -0.75
CHPT1-208ENST00000552215 QTRT2Q9H974 415 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms