RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 POTEB3A0JP26 581 aa8.87□□□□□ -0.99
CPSF6-206ENST00000550987 MSS51Q4VC12 460 aa8.87□□□□□ -0.99
CPSF6-206ENST00000550987 POTEBQ6S5H4 581 aa8.87□□□□□ -0.99
CPSF6-206ENST00000550987 ZBTB33Q86T24 672 aa8.87□□□□□ -0.99
CPSF6-206ENST00000550987 CCDC24Q8N4L8 307 aa8.87□□□□□ -0.99
CPSF6-206ENST00000550987 WBP1LQ9NX94 342 aa8.87□□□□□ -0.99
CPSF6-206ENST00000550987 RASA1P20936 1047 aa8.86□□□□□ -0.99
CPSF6-206ENST00000550987 ELOAQ14241 798 aaKnown RBP8.86□□□□□ -0.99
CPSF6-206ENST00000550987 FOXD4L5Q5VV16 416 aaPredicted RBP8.86□□□□□ -0.99
CPSF6-206ENST00000550987 PLEKHM2Q8IWE5 1019 aa8.86□□□□□ -0.99
CPSF6-206ENST00000550987 FAM160A2Q8N612 972 aaPredicted RBP8.86□□□□□ -0.99
CPSF6-206ENST00000550987 FOXD4L4Q8WXT5 416 aaPredicted RBP8.86□□□□□ -0.99
CPSF6-206ENST00000550987 ARHGAP9Q9BRR9 750 aa8.86□□□□□ -0.99
CPSF6-206ENST00000550987 DXOO77932 396 aaKnown RBP8.85□□□□□ -0.99
CPSF6-206ENST00000550987 CCDC27Q2M243 656 aa8.85□□□□□ -0.99
CPSF6-206ENST00000550987 TMEM164Q5U3C3 297 aa8.85□□□□□ -0.99
CPSF6-206ENST00000550987 FAM200AQ8TCP9 573 aa8.85□□□□□ -0.99
CPSF6-206ENST00000550987 MED1Q15648 1581 aaPredicted RBP8.85□□□□□ -0.99
CPSF6-206ENST00000550987 ATP5J2-PTCD1G3V325 749 aa8.84□□□□□ -0.99
CPSF6-206ENST00000550987 LZTS3O60299 673 aaPredicted RBP8.84□□□□□ -0.99
CPSF6-206ENST00000550987 SRCAPQ6ZRS2 3230 aa8.84□□□□□ -0.99
CPSF6-206ENST00000550987 DZIP3Q86Y13 1208 aaKnown RBP8.84□□□□□ -0.99
CPSF6-206ENST00000550987 FAM174AQ8TBP5 190 aa8.84□□□□□ -0.99
CPSF6-206ENST00000550987 CCER1Q8TC90 406 aaPredicted RBP8.84□□□□□ -0.99
CPSF6-206ENST00000550987 RBM25P49756 843 aaKnown RBP8.83□□□□□ -1
CPSF6-206ENST00000550987 MMP16P51512 607 aa8.83□□□□□ -1
CPSF6-206ENST00000550987 NCOA4Q13772 614 aa8.83□□□□□ -1
CPSF6-206ENST00000550987 PLPP7Q8NBV4 271 aa8.83□□□□□ -1
CPSF6-206ENST00000550987 ADAM32Q8TC27 787 aa8.83□□□□□ -1
CPSF6-206ENST00000550987 STK32AQ8WU08 396 aa8.83□□□□□ -1
CPSF6-206ENST00000550987 MYT1LQ9UL68 1186 aa8.83□□□□□ -1
CPSF6-206ENST00000550987 FAM196BA6NMK8 535 aa8.82□□□□□ -1
CPSF6-206ENST00000550987 AGERQ15109 404 aa8.82□□□□□ -1
CPSF6-206ENST00000550987 EML3Q32P44 896 aa8.82□□□□□ -1
CPSF6-206ENST00000550987 MAP7D1Q3KQU3 841 aa8.82□□□□□ -1
CPSF6-206ENST00000550987 CDCA7Q9BWT1 371 aaPredicted RBP8.82□□□□□ -1
CPSF6-206ENST00000550987 PRDM9Q9NQV7 894 aa8.82□□□□□ -1
CPSF6-206ENST00000550987 USP17L15C9J2P7 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L10C9JJH3 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L13C9JLJ4 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L12C9JPN9 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L11C9JVI0 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L21D6R901 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L18D6R9N7 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L22D6RA61 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L17D6RBQ6 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L19D6RCP7 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L20D6RJB6 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 USP17L24Q0WX57 530 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 SND1Q7KZF4 910 aaKnown RBP eCLIP8.81□□□□□ -1
CPSF6-206ENST00000550987 CARD14Q9BXL6 1004 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 ZMIZ1Q9ULJ6 1067 aa8.81□□□□□ -1
CPSF6-206ENST00000550987 RBM19Q9Y4C8 960 aaKnown RBP8.81□□□□□ -1
CPSF6-206ENST00000550987 MAGEB6P1A0A0J9YX57 407 aa8.8□□□□□ -1
CPSF6-206ENST00000550987 ZPR1O75312 459 aa8.8□□□□□ -1
CPSF6-206ENST00000550987 CRTC2Q53ET0 693 aaPredicted RBP8.8□□□□□ -1
CPSF6-206ENST00000550987 TRIM50Q86XT4 487 aa8.8□□□□□ -1
CPSF6-206ENST00000550987 UNC93B1Q9H1C4 597 aa8.8□□□□□ -1
CPSF6-206ENST00000550987 NOD1Q9Y239 953 aa8.8□□□□□ -1
CPSF6-206ENST00000550987 ADH1BP00325 375 aa8.79□□□□□ -1
CPSF6-206ENST00000550987 ARID4AP29374 1257 aaPredicted RBP8.79□□□□□ -1
CPSF6-206ENST00000550987 PHTF2Q8N3S3 785 aa8.79□□□□□ -1
CPSF6-206ENST00000550987 GNEQ9Y223 722 aaKnown RBP8.79□□□□□ -1
CPSF6-206ENST00000550987 ATP1A2P50993 1020 aa8.78□□□□□ -1
CPSF6-206ENST00000550987 PTK7Q13308 1070 aa8.78□□□□□ -1
CPSF6-206ENST00000550987 ANKMY2Q8IV38 441 aa8.78□□□□□ -1
CPSF6-206ENST00000550987 OGFOD1Q8N543 542 aa8.78□□□□□ -1
CPSF6-206ENST00000550987 KCTD12Q96CX2 325 aaKnown RBP8.78□□□□□ -1
CPSF6-206ENST00000550987 HMGXB3Q12766 1538 aa8.77□□□□□ -1.01
CPSF6-206ENST00000550987 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
CPSF6-206ENST00000550987 THSD4Q6ZMP0 1018 aa8.77□□□□□ -1.01
CPSF6-206ENST00000550987 NYAP1Q6ZVC0 841 aa8.77□□□□□ -1.01
CPSF6-206ENST00000550987 ZNF594Q96JF6 807 aaPredicted RBP8.77□□□□□ -1.01
CPSF6-206ENST00000550987 OCSTAMPQ9BR26 566 aa8.77□□□□□ -1.01
CPSF6-206ENST00000550987 SLC6A16Q9GZN6 736 aa8.77□□□□□ -1.01
CPSF6-206ENST00000550987 DNAAF2Q9NVR5 837 aaKnown RBP8.77□□□□□ -1.01
CPSF6-206ENST00000550987 DOLKQ9UPQ8 538 aa8.77□□□□□ -1.01
CPSF6-206ENST00000550987 TOP2BQ02880 1626 aa8.76□□□□□ -1.01
CPSF6-206ENST00000550987 CLASP1Q7Z460 1538 aa8.76□□□□□ -1.01
CPSF6-206ENST00000550987 TLL1O43897 1013 aa8.76□□□□□ -1.01
CPSF6-206ENST00000550987 DPYDQ12882 1025 aa8.76□□□□□ -1.01
CPSF6-206ENST00000550987 OXLD1Q5BKU9 147 aa8.76□□□□□ -1.01
CPSF6-206ENST00000550987 RNF20Q5VTR2 975 aa8.76□□□□□ -1.01
CPSF6-206ENST00000550987 BPHLQ86WA6 291 aaPredicted RBP8.76□□□□□ -1.01
CPSF6-206ENST00000550987 GAPVD1Q14C86 1478 aa8.76□□□□□ -1.01
CPSF6-206ENST00000550987 E9PSI1 815 aa8.75□□□□□ -1.01
CPSF6-206ENST00000550987 SSFA2P28290 1259 aa8.75□□□□□ -1.01
CPSF6-206ENST00000550987 TSGA10IPQ3SY00 556 aa8.75□□□□□ -1.01
CPSF6-206ENST00000550987 BAP1Q92560 729 aa8.75□□□□□ -1.01
CPSF6-206ENST00000550987 PCF11O94913 1555 aaKnown RBP8.74□□□□□ -1.01
CPSF6-206ENST00000550987 ATP2B4P23634 1241 aa8.74□□□□□ -1.01
CPSF6-206ENST00000550987 PTPN5P54829 565 aa8.74□□□□□ -1.01
CPSF6-206ENST00000550987 PSME1Q06323 249 aa8.74□□□□□ -1.01
CPSF6-206ENST00000550987 SH3BP5LQ7L8J4 393 aa8.74□□□□□ -1.01
CPSF6-206ENST00000550987 ZNF428Q96B54 188 aa8.74□□□□□ -1.01
CPSF6-206ENST00000550987 MTRQ99707 1265 aa8.74□□□□□ -1.01
CPSF6-206ENST00000550987 ZNF608Q9ULD9 1512 aaPredicted RBP8.74□□□□□ -1.01
CPSF6-206ENST00000550987 GIGYF1O75420 1035 aaPredicted RBP8.73□□□□□ -1.01
CPSF6-206ENST00000550987 LINC01559Q495D7 138 aa8.73□□□□□ -1.01
CPSF6-206ENST00000550987 LARGE2Q8N3Y3 721 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms