RNA–Protein interactions for RNA: ENST00000550808.5

MTA1-218, Transcript of metastasis associated 1, human

TSL 5

Gene MTA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MTA1-218	ENST00000550808	SLC12A5	Q9H2X9	1139 aa		32.73	■■■□□ 2.83
MTA1-218	ENST00000550808	EZH2	Q15910	746 aa	Known RBP	32.72	■■■□□ 2.83
MTA1-218	ENST00000550808	WNK3	Q9BYP7	1800 aa		32.72	■■■□□ 2.83
MTA1-218	ENST00000550808	WDR17	Q8IZU2	1322 aa		32.71	■■■□□ 2.83
MTA1-218	ENST00000550808	APBA3	O96018	575 aa		32.7	■■■□□ 2.83
MTA1-218	ENST00000550808	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	32.7	■■■□□ 2.83
MTA1-218	ENST00000550808	NME9	Q86XW9	330 aa		32.7	■■■□□ 2.83
MTA1-218	ENST00000550808	LRRC37A3	O60309	1634 aa		32.69	■■■□□ 2.82
MTA1-218	ENST00000550808	CSB-PGBD3	P0DP91	1061 aa		32.68	■■■□□ 2.82
MTA1-218	ENST00000550808	USP54	Q70EL1	1684 aa		32.68	■■■□□ 2.82
MTA1-218	ENST00000550808	ST20-MTHFS	A0A0A6YYL1	179 aa		32.67	■■■□□ 2.82
MTA1-218	ENST00000550808	LTN1	O94822	1766 aa		32.66	■■■□□ 2.82
MTA1-218	ENST00000550808	CAMKK2	Q96RR4	588 aa		32.66	■■■□□ 2.82
MTA1-218	ENST00000550808	USP31	Q70CQ4	1352 aa		32.66	■■■□□ 2.82
MTA1-218	ENST00000550808	TERF2IP	Q9NYB0	399 aa		32.65	■■■□□ 2.82
MTA1-218	ENST00000550808		A0A1W2PP64	1363 aa		32.64	■■■□□ 2.82
MTA1-218	ENST00000550808	DDB1	Q16531	1140 aa		32.64	■■■□□ 2.82
MTA1-218	ENST00000550808	TESK2	Q96S53	571 aa		32.64	■■■□□ 2.82
MTA1-218	ENST00000550808	PEAK1	Q9H792	1746 aa		32.63	■■■□□ 2.81
MTA1-218	ENST00000550808	EDC4	Q6P2E9	1401 aa	Known RBP	32.63	■■■□□ 2.81
MTA1-218	ENST00000550808	R3HDM1	Q15032	1099 aa	Known RBP	32.62	■■■□□ 2.81
MTA1-218	ENST00000550808	PUS7	Q96PZ0	661 aa	Known RBP	32.62	■■■□□ 2.81
MTA1-218	ENST00000550808	SBF2	Q86WG5	1849 aa		32.62	■■■□□ 2.81
MTA1-218	ENST00000550808	OVOS2	A0A0G2JMS6	1433 aa		32.6	■■■□□ 2.81
MTA1-218	ENST00000550808	OVOS2	A0A0J9YW53	1432 aa		32.6	■■■□□ 2.81
MTA1-218	ENST00000550808	OVOS2	Q6IE36	1432 aa		32.6	■■■□□ 2.81
MTA1-218	ENST00000550808	RREB1	Q92766	1687 aa		32.6	■■■□□ 2.81
MTA1-218	ENST00000550808	LRP5	O75197	1615 aa		32.6	■■■□□ 2.81
MTA1-218	ENST00000550808	CARD10	Q9BWT7	1032 aa		32.6	■■■□□ 2.81
MTA1-218	ENST00000550808	ABCC6	O95255	1503 aa		32.6	■■■□□ 2.81
MTA1-218	ENST00000550808	PARD3	Q8TEW0	1356 aa		32.58	■■■□□ 2.81
MTA1-218	ENST00000550808	NUP188	Q5SRE5	1749 aa		32.57	■■■□□ 2.8
MTA1-218	ENST00000550808	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.56	■■■□□ 2.8
MTA1-218	ENST00000550808	C11orf95	C9JLR9	678 aa	Predicted RBP	32.55	■■■□□ 2.8
MTA1-218	ENST00000550808	MARCH10	Q8NA82	808 aa	Predicted RBP	32.53	■■■□□ 2.8
MTA1-218	ENST00000550808	USP47	Q96K76	1375 aa		32.52	■■■□□ 2.8
MTA1-218	ENST00000550808	CCDC7	Q96M83	1385 aa		32.52	■■■□□ 2.8
MTA1-218	ENST00000550808	NINL	Q9Y2I6	1382 aa		32.52	■■■□□ 2.8
MTA1-218	ENST00000550808	SLC24A1	O60721	1099 aa		32.51	■■■□□ 2.79
MTA1-218	ENST00000550808	NLRP2	Q9NX02	1062 aa		32.5	■■■□□ 2.79
MTA1-218	ENST00000550808	ERBB3	P21860	1342 aa		32.5	■■■□□ 2.79
MTA1-218	ENST00000550808	EXOC5	O00471	708 aa		32.47	■■■□□ 2.79
MTA1-218	ENST00000550808	PTF1A	Q7RTS3	328 aa		32.47	■■■□□ 2.79
MTA1-218	ENST00000550808	PCGF6	Q9BYE7	350 aa		32.47	■■■□□ 2.79
MTA1-218	ENST00000550808	ANKRD24	Q8TF21	1146 aa		32.46	■■■□□ 2.79
MTA1-218	ENST00000550808	TMF1	P82094	1093 aa		32.45	■■■□□ 2.79
MTA1-218	ENST00000550808	NBPF14	Q5TI25	921 aa		32.44	■■■□□ 2.78
MTA1-218	ENST00000550808	BCL11B	Q9C0K0	894 aa	Predicted RBP	32.44	■■■□□ 2.78
MTA1-218	ENST00000550808	RGPD3	A6NKT7	1758 aa	Predicted RBP	32.44	■■■□□ 2.78
MTA1-218	ENST00000550808	RGPD4	Q7Z3J3	1758 aa		32.44	■■■□□ 2.78
MTA1-218	ENST00000550808	COG3	Q96JB2	828 aa		32.43	■■■□□ 2.78
MTA1-218	ENST00000550808	TNS2	Q63HR2	1409 aa		32.43	■■■□□ 2.78
MTA1-218	ENST00000550808	ANKRD36B	Q8N2N9	1353 aa		32.42	■■■□□ 2.78
MTA1-218	ENST00000550808	BCL9	O00512	1426 aa		32.4	■■■□□ 2.78
MTA1-218	ENST00000550808	LTV1	Q96GA3	475 aa	Predicted RBP	32.39	■■■□□ 2.78
MTA1-218	ENST00000550808	PLSCR1	O15162	318 aa		32.38	■■■□□ 2.77
MTA1-218	ENST00000550808	IL2RB	P14784	551 aa		32.38	■■■□□ 2.77
MTA1-218	ENST00000550808	FBLN1	P23142	703 aa		32.38	■■■□□ 2.77
MTA1-218	ENST00000550808	IP6K1	Q92551	441 aa		32.38	■■■□□ 2.77
MTA1-218	ENST00000550808	KAT6B	Q8WYB5	2073 aa		32.37	■■■□□ 2.77
MTA1-218	ENST00000550808	FAM208A	Q9UK61	1670 aa	Known RBP	32.36	■■■□□ 2.77
MTA1-218	ENST00000550808	MAP3K19	Q56UN5	1328 aa		32.34	■■■□□ 2.77
MTA1-218	ENST00000550808	RGPD2	P0DJD1	1756 aa		32.33	■■■□□ 2.77
MTA1-218	ENST00000550808	TIMELESS	Q9UNS1	1208 aa		32.33	■■■□□ 2.77
MTA1-218	ENST00000550808	KIF20B	Q96Q89	1820 aa		32.33	■■■□□ 2.77
MTA1-218	ENST00000550808	NHS	Q6T4R5	1651 aa		32.32	■■■□□ 2.76
MTA1-218	ENST00000550808	AMPH	P49418	695 aa		32.32	■■■□□ 2.76
MTA1-218	ENST00000550808	GGNBP2	Q9H3C7	697 aa		32.32	■■■□□ 2.76
MTA1-218	ENST00000550808	KCNQ2	O43526	872 aa		32.31	■■■□□ 2.76
MTA1-218	ENST00000550808	CDCA8	Q53HL2	280 aa		32.31	■■■□□ 2.76
MTA1-218	ENST00000550808	ACSBG1	Q96GR2	724 aa		32.31	■■■□□ 2.76
MTA1-218	ENST00000550808	CLSPN	Q9HAW4	1339 aa		32.3	■■■□□ 2.76
MTA1-218	ENST00000550808	FYB1	O15117	783 aa		32.3	■■■□□ 2.76
MTA1-218	ENST00000550808	HOXC9	P31274	260 aa		32.3	■■■□□ 2.76
MTA1-218	ENST00000550808	MYOM1	P52179	1685 aa		32.3	■■■□□ 2.76
MTA1-218	ENST00000550808	PROM2	Q8N271	834 aa		32.29	■■■□□ 2.76
MTA1-218	ENST00000550808	RRS1	Q15050	365 aa	Known RBP	32.27	■■■□□ 2.76
MTA1-218	ENST00000550808	ANO8	Q9HCE9	1232 aa	Predicted RBP	32.27	■■■□□ 2.76
MTA1-218	ENST00000550808	BTAF1	O14981	1849 aa		32.24	■■■□□ 2.75
MTA1-218	ENST00000550808	TXNRD1	Q16881	649 aa		32.24	■■■□□ 2.75
MTA1-218	ENST00000550808	DDX54	Q8TDD1	881 aa	Known RBP	32.22	■■■□□ 2.75
MTA1-218	ENST00000550808	RTL1	A6NKG5	1358 aa		32.2	■■■□□ 2.75
MTA1-218	ENST00000550808	CARD14	Q9BXL6	1004 aa		32.19	■■■□□ 2.74
MTA1-218	ENST00000550808	SPON1	Q9HCB6	807 aa		32.19	■■■□□ 2.74
MTA1-218	ENST00000550808	CASZ1	Q86V15	1759 aa		32.19	■■■□□ 2.74
MTA1-218	ENST00000550808	NSD3	Q9BZ95	1437 aa		32.17	■■■□□ 2.74
MTA1-218	ENST00000550808	PDGFD	Q9GZP0	370 aa	Predicted RBP	32.16	■■■□□ 2.74
MTA1-218	ENST00000550808	SHANK3	Q9BYB0	1731 aa		32.15	■■■□□ 2.74
MTA1-218	ENST00000550808	POLR3GL	Q9BT43	218 aa		32.15	■■■□□ 2.74
MTA1-218	ENST00000550808	STK32B	Q9NY57	414 aa		32.15	■■■□□ 2.74
MTA1-218	ENST00000550808	CCER1	Q8TC90	406 aa	Predicted RBP	32.14	■■■□□ 2.74
MTA1-218	ENST00000550808	PPP1R1B	Q9UD71	204 aa	Predicted RBP	32.14	■■■□□ 2.74
MTA1-218	ENST00000550808	MEGF6	O75095	1541 aa		32.14	■■■□□ 2.74
MTA1-218	ENST00000550808	NBPF6	Q5VWK0	638 aa		32.13	■■■□□ 2.73
MTA1-218	ENST00000550808	USHBP1	Q8N6Y0	703 aa		32.13	■■■□□ 2.73
MTA1-218	ENST00000550808	NBPF4	Q96M43	638 aa		32.13	■■■□□ 2.73
MTA1-218	ENST00000550808	SMG6	Q86US8	1419 aa	Known RBP	32.12	■■■□□ 2.73
MTA1-218	ENST00000550808	DOT1L	Q8TEK3	1739 aa		32.12	■■■□□ 2.73
MTA1-218	ENST00000550808	HSP90AB2P	Q58FF8	381 aa		32.11	■■■□□ 2.73
MTA1-218	ENST00000550808	SLC15A2	Q16348	729 aa		32.1	■■■□□ 2.73

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms