RNA–Protein interactions for RNA: ENST00000550657.1

UBE2N-205, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2 BASIC

Gene UBE2N, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-205ENST00000550657 FAM135BQ49AJ0 1406 aa11.58□□□□□ -0.56
UBE2N-205ENST00000550657 KRT24Q2M2I5 525 aa11.57□□□□□ -0.56
UBE2N-205ENST00000550657 SULT6B1Q6IMI4 303 aa11.57□□□□□ -0.56
UBE2N-205ENST00000550657 CHD1LQ86WJ1 897 aa11.57□□□□□ -0.56
UBE2N-205ENST00000550657 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.57□□□□□ -0.56
UBE2N-205ENST00000550657 CALD1Q05682 793 aaKnown RBP11.57□□□□□ -0.56
UBE2N-205ENST00000550657 ZMYM3Q14202 1370 aa11.57□□□□□ -0.56
UBE2N-205ENST00000550657 NUCB1Q02818 461 aa11.57□□□□□ -0.56
UBE2N-205ENST00000550657 SLC26A8Q96RN1 970 aa11.57□□□□□ -0.56
UBE2N-205ENST00000550657 AGLP35573 1532 aa11.56□□□□□ -0.56
UBE2N-205ENST00000550657 ZBTB7BO15156 539 aaPredicted RBP11.56□□□□□ -0.56
UBE2N-205ENST00000550657 IFT57Q9NWB7 429 aa11.56□□□□□ -0.56
UBE2N-205ENST00000550657 PRR36Q9H6K5 1346 aa11.56□□□□□ -0.56
UBE2N-205ENST00000550657 MCM10Q7L590 875 aa11.56□□□□□ -0.56
UBE2N-205ENST00000550657 PPP6R1Q9UPN7 881 aa11.56□□□□□ -0.56
UBE2N-205ENST00000550657 EDC4Q6P2E9 1401 aaKnown RBP11.56□□□□□ -0.56
UBE2N-205ENST00000550657 KIF13AQ9H1H9 1805 aa11.55□□□□□ -0.56
UBE2N-205ENST00000550657 ATP7BP35670 1465 aa11.55□□□□□ -0.56
UBE2N-205ENST00000550657 APBB1O00213 710 aa11.55□□□□□ -0.56
UBE2N-205ENST00000550657 CEBPAP49715 358 aaPredicted RBP11.55□□□□□ -0.56
UBE2N-205ENST00000550657 HDGFP51858 240 aaKnown RBP11.54□□□□□ -0.56
UBE2N-205ENST00000550657 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
UBE2N-205ENST00000550657 GZF1Q9H116 711 aaPredicted RBP11.54□□□□□ -0.56
UBE2N-205ENST00000550657 ANTXR1Q9H6X2 564 aa11.54□□□□□ -0.56
UBE2N-205ENST00000550657 MIS18AQ9NYP9 233 aa11.54□□□□□ -0.56
UBE2N-205ENST00000550657 LMOD3Q0VAK6 560 aa11.54□□□□□ -0.56
UBE2N-205ENST00000550657 EIF4A2Q14240 407 aaKnown RBP11.54□□□□□ -0.56
UBE2N-205ENST00000550657 HSP90AB2PQ58FF8 381 aa11.54□□□□□ -0.56
UBE2N-205ENST00000550657 CPSF1Q10570 1443 aaKnown RBP11.53□□□□□ -0.56
UBE2N-205ENST00000550657 HSCBQ8IWL3 235 aa11.53□□□□□ -0.56
UBE2N-205ENST00000550657 FOXD4L1Q9NU39 408 aa11.53□□□□□ -0.56
UBE2N-205ENST00000550657 CPS1P31327 1500 aa11.53□□□□□ -0.56
UBE2N-205ENST00000550657 ACEP12821 1306 aa11.53□□□□□ -0.56
UBE2N-205ENST00000550657 ZNF853P0CG23 659 aa11.52□□□□□ -0.56
UBE2N-205ENST00000550657 SIRT2Q8IXJ6 389 aa11.52□□□□□ -0.56
UBE2N-205ENST00000550657 SPATA31D1Q6ZQQ2 1576 aa11.52□□□□□ -0.56
UBE2N-205ENST00000550657 ROBO2Q9HCK4 1378 aa11.52□□□□□ -0.56
UBE2N-205ENST00000550657 ZNF428Q96B54 188 aa11.52□□□□□ -0.57
UBE2N-205ENST00000550657 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
UBE2N-205ENST00000550657 LTKP29376 864 aa11.51□□□□□ -0.57
UBE2N-205ENST00000550657 TTC21BQ7Z4L5 1316 aa11.51□□□□□ -0.57
UBE2N-205ENST00000550657 TNRQ92752 1358 aa11.51□□□□□ -0.57
UBE2N-205ENST00000550657 API5Q9BZZ5 524 aaKnown RBP11.51□□□□□ -0.57
UBE2N-205ENST00000550657 GCC1Q96CN9 775 aa11.5□□□□□ -0.57
UBE2N-205ENST00000550657 DLC1Q96QB1 1528 aa11.5□□□□□ -0.57
UBE2N-205ENST00000550657 FOXO3O43524 673 aa11.5□□□□□ -0.57
UBE2N-205ENST00000550657 NUTM2GQ5VZR2 741 aa11.5□□□□□ -0.57
UBE2N-205ENST00000550657 ARHGAP45Q92619 1136 aa11.5□□□□□ -0.57
UBE2N-205ENST00000550657 CHMP4BQ9H444 224 aaKnown RBP11.49□□□□□ -0.57
UBE2N-205ENST00000550657 AATKQ6ZMQ8 1374 aa11.49□□□□□ -0.57
UBE2N-205ENST00000550657 ABCC4O15439 1325 aa11.49□□□□□ -0.57
UBE2N-205ENST00000550657 KIF20BQ96Q89 1820 aa11.49□□□□□ -0.57
UBE2N-205ENST00000550657 HSP90AA1P07900 732 aaKnown RBP11.49□□□□□ -0.57
UBE2N-205ENST00000550657 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
UBE2N-205ENST00000550657 C16orf71Q8IYS4 520 aaPredicted RBP11.49□□□□□ -0.57
UBE2N-205ENST00000550657 ANKRD26Q9UPS8 1709 aa11.49□□□□□ -0.57
UBE2N-205ENST00000550657 BRPF1P55201 1214 aaPredicted RBP11.49□□□□□ -0.57
UBE2N-205ENST00000550657 SLC4A10Q6U841 1118 aa11.49□□□□□ -0.57
UBE2N-205ENST00000550657 CDK12Q9NYV4 1490 aaPredicted RBP11.48□□□□□ -0.57
UBE2N-205ENST00000550657 SETD1AO15047 1707 aaKnown RBP11.48□□□□□ -0.57
UBE2N-205ENST00000550657 BMP2KLQ5H9B9 411 aa11.48□□□□□ -0.57
UBE2N-205ENST00000550657 TBC1D9Q6ZT07 1266 aa11.48□□□□□ -0.57
UBE2N-205ENST00000550657 RBM42Q9BTD8 480 aaKnown RBP11.48□□□□□ -0.57
UBE2N-205ENST00000550657 TMEM2Q9UHN6 1383 aa11.48□□□□□ -0.57
UBE2N-205ENST00000550657 NGDNQ8NEJ9 315 aaKnown RBP11.48□□□□□ -0.57
UBE2N-205ENST00000550657 CHMP5Q9NZZ3 219 aa11.48□□□□□ -0.57
UBE2N-205ENST00000550657 PLEKHG5O94827 1062 aa11.47□□□□□ -0.57
UBE2N-205ENST00000550657 NECTIN2Q92692 538 aa11.47□□□□□ -0.57
UBE2N-205ENST00000550657 SMARCA5O60264 1052 aaPredicted RBP11.47□□□□□ -0.57
UBE2N-205ENST00000550657 MCM4P33991 863 aa11.47□□□□□ -0.57
UBE2N-205ENST00000550657 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
UBE2N-205ENST00000550657 SLC4A2P04920 1241 aa11.46□□□□□ -0.57
UBE2N-205ENST00000550657 PTCH1Q13635 1447 aa11.46□□□□□ -0.57
UBE2N-205ENST00000550657 VIRMAQ69YN4 1812 aaKnown RBP11.46□□□□□ -0.57
UBE2N-205ENST00000550657 CDC42BPGQ6DT37 1551 aa11.46□□□□□ -0.57
UBE2N-205ENST00000550657 AMPHP49418 695 aa11.46□□□□□ -0.57
UBE2N-205ENST00000550657 C14orf37Q86TY3 774 aa11.46□□□□□ -0.57
UBE2N-205ENST00000550657 OTUD7AQ8TE49 926 aaPredicted RBP11.46□□□□□ -0.57
UBE2N-205ENST00000550657 RTF1Q92541 710 aaKnown RBP11.46□□□□□ -0.57
UBE2N-205ENST00000550657 LTV1Q96GA3 475 aaPredicted RBP11.46□□□□□ -0.57
UBE2N-205ENST00000550657 AMOTL2Q9Y2J4 779 aa11.46□□□□□ -0.57
UBE2N-205ENST00000550657 F6X3S4 739 aa11.46□□□□□ -0.58
UBE2N-205ENST00000550657 MEIS3Q99687 375 aa11.45□□□□□ -0.58
UBE2N-205ENST00000550657 TSPYL4Q9UJ04 414 aa11.45□□□□□ -0.58
UBE2N-205ENST00000550657 EID1Q9Y6B2 187 aa11.45□□□□□ -0.58
UBE2N-205ENST00000550657 NRXN3Q9Y4C0 1643 aa11.45□□□□□ -0.58
UBE2N-205ENST00000550657 CD2BP2O95400 341 aaKnown RBP11.45□□□□□ -0.58
UBE2N-205ENST00000550657 GSPT1P15170 499 aaKnown RBP11.45□□□□□ -0.58
UBE2N-205ENST00000550657 RBM25P49756 843 aaKnown RBP11.45□□□□□ -0.58
UBE2N-205ENST00000550657 MAP3K19Q56UN5 1328 aa11.45□□□□□ -0.58
UBE2N-205ENST00000550657 CHL1O00533 1208 aa11.44□□□□□ -0.58
UBE2N-205ENST00000550657 MTHFSDQ2M296 383 aaKnown RBP11.44□□□□□ -0.58
UBE2N-205ENST00000550657 SIRT1Q96EB6 747 aa11.44□□□□□ -0.58
UBE2N-205ENST00000550657 PIK3R4Q99570 1358 aa11.44□□□□□ -0.58
UBE2N-205ENST00000550657 G2E3Q7L622 706 aa11.44□□□□□ -0.58
UBE2N-205ENST00000550657 ZBTB7CA1YPR0 619 aa11.43□□□□□ -0.58
UBE2N-205ENST00000550657 CDC45O75419 566 aa11.43□□□□□ -0.58
UBE2N-205ENST00000550657 PLEKHM2Q8IWE5 1019 aa11.43□□□□□ -0.58
UBE2N-205ENST00000550657 PLEKHG3A1L390 1219 aa11.43□□□□□ -0.58
UBE2N-205ENST00000550657 TRAK2O60296 914 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms