RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 PRDM15P57071 1507 aaPredicted RBP9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 PPP1R15AO75807 674 aaPredicted RBP9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 ITGBL1O95965 494 aaPredicted RBP9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 KCNA6P17658 529 aa9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 IDI1Q13907 227 aa9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 CCER1Q8TC90 406 aaPredicted RBP9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 CDCA7LQ96GN5 454 aa9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 HPS5Q9UPZ3 1129 aa9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 ARHGAP23Q9P227 1491 aa9.06□□□□□ -0.96
DEPDC4-209ENST00000550587 ADGRL2O95490 1459 aa9.05□□□□□ -0.96
DEPDC4-209ENST00000550587 C3orf80F5H4A9 247 aa9.05□□□□□ -0.96
DEPDC4-209ENST00000550587 PRSS12P56730 875 aa9.05□□□□□ -0.96
DEPDC4-209ENST00000550587 LRCH3Q96II8 777 aa9.05□□□□□ -0.96
DEPDC4-209ENST00000550587 CDHR5Q9HBB8 845 aa9.05□□□□□ -0.96
DEPDC4-209ENST00000550587 MROH1Q8NDA8 1641 aa9.05□□□□□ -0.96
DEPDC4-209ENST00000550587 EFCAB6Q5THR3 1501 aa9.05□□□□□ -0.96
DEPDC4-209ENST00000550587 CROCC2H7BZ55 1655 aa9.04□□□□□ -0.96
DEPDC4-209ENST00000550587 RGS20O76081 388 aa9.04□□□□□ -0.96
DEPDC4-209ENST00000550587 OSBPP22059 807 aa9.04□□□□□ -0.96
DEPDC4-209ENST00000550587 SLC26A8Q96RN1 970 aa9.04□□□□□ -0.96
DEPDC4-209ENST00000550587 TSR3Q9UJK0 312 aaKnown RBP9.04□□□□□ -0.96
DEPDC4-209ENST00000550587 FAM135BQ49AJ0 1406 aa9.04□□□□□ -0.96
DEPDC4-209ENST00000550587 STRCP1A6NGW2 1772 aa9.04□□□□□ -0.96
DEPDC4-209ENST00000550587 MSH6P52701 1360 aa9.03□□□□□ -0.96
DEPDC4-209ENST00000550587 PIK3C2BO00750 1634 aa9.03□□□□□ -0.96
DEPDC4-209ENST00000550587 ZEB1P37275 1124 aaPredicted RBP9.03□□□□□ -0.96
DEPDC4-209ENST00000550587 NYAP1Q6ZVC0 841 aa9.03□□□□□ -0.96
DEPDC4-209ENST00000550587 C14orf37Q86TY3 774 aa9.03□□□□□ -0.96
DEPDC4-209ENST00000550587 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.03□□□□□ -0.96
DEPDC4-209ENST00000550587 KDM5AP29375 1690 aaKnown RBP9.03□□□□□ -0.96
DEPDC4-209ENST00000550587 TMEM94Q12767 1356 aa9.02□□□□□ -0.97
DEPDC4-209ENST00000550587 CLSPNQ9HAW4 1339 aa9.02□□□□□ -0.97
DEPDC4-209ENST00000550587 LMTK2Q8IWU2 1503 aa9.01□□□□□ -0.97
DEPDC4-209ENST00000550587 GCC2Q8IWJ2 1684 aa9.01□□□□□ -0.97
DEPDC4-209ENST00000550587 SAMD7Q7Z3H4 446 aa9.01□□□□□ -0.97
DEPDC4-209ENST00000550587 ALKQ9UM73 1620 aa9.01□□□□□ -0.97
DEPDC4-209ENST00000550587 DHX57Q6P158 1386 aaKnown RBP9□□□□□ -0.97
DEPDC4-209ENST00000550587 KCNC4Q03721 635 aa9□□□□□ -0.97
DEPDC4-209ENST00000550587 TATDN2Q93075 761 aa9□□□□□ -0.97
DEPDC4-209ENST00000550587 SLAIN2Q9P270 581 aa9□□□□□ -0.97
DEPDC4-209ENST00000550587 PNMA3Q9UL41 463 aa9□□□□□ -0.97
DEPDC4-209ENST00000550587 RPRD2Q5VT52 1461 aaKnown RBP9□□□□□ -0.97
DEPDC4-209ENST00000550587 ANKRD50Q9ULJ7 1429 aa8.99□□□□□ -0.97
DEPDC4-209ENST00000550587 PPP4CP60510 307 aa8.99□□□□□ -0.97
DEPDC4-209ENST00000550587 IRX2Q9BZI1 471 aaPredicted RBP8.99□□□□□ -0.97
DEPDC4-209ENST00000550587 NKTRP30414 1462 aaKnown RBP8.99□□□□□ -0.97
DEPDC4-209ENST00000550587 NOS1P29475 1434 aa8.98□□□□□ -0.97
DEPDC4-209ENST00000550587 ATF3P18847 181 aa8.98□□□□□ -0.97
DEPDC4-209ENST00000550587 MEX3CQ5U5Q3 659 aaKnown RBP8.98□□□□□ -0.97
DEPDC4-209ENST00000550587 TSHZ2Q9NRE2 1034 aa8.98□□□□□ -0.97
DEPDC4-209ENST00000550587 TBX22Q9Y458 520 aa8.98□□□□□ -0.97
DEPDC4-209ENST00000550587 ADGRB3O60242 1522 aa8.98□□□□□ -0.97
DEPDC4-209ENST00000550587 PLEKHG1Q9ULL1 1385 aa8.98□□□□□ -0.97
DEPDC4-209ENST00000550587 XIRP1Q702N8 1843 aaKnown RBP8.97□□□□□ -0.97
DEPDC4-209ENST00000550587 NUDT18Q6ZVK8 323 aa8.97□□□□□ -0.97
DEPDC4-209ENST00000550587 TET3O43151 1660 aa8.97□□□□□ -0.97
DEPDC4-209ENST00000550587 RIMS2Q9UQ26 1411 aa8.97□□□□□ -0.97
DEPDC4-209ENST00000550587 NCOA3Q9Y6Q9 1424 aa8.97□□□□□ -0.97
DEPDC4-209ENST00000550587 NBPF26B4DH59 902 aa8.96□□□□□ -0.98
DEPDC4-209ENST00000550587 TRIM52Q96A61 297 aa8.96□□□□□ -0.98
DEPDC4-209ENST00000550587 C19orf44Q9H6X5 657 aa8.96□□□□□ -0.98
DEPDC4-209ENST00000550587 RGS17Q9UGC6 210 aaPredicted RBP8.96□□□□□ -0.98
DEPDC4-209ENST00000550587 ROBO1Q9Y6N7 1651 aa8.96□□□□□ -0.98
DEPDC4-209ENST00000550587 JCADQ9P266 1359 aa8.96□□□□□ -0.98
DEPDC4-209ENST00000550587 ZNF772Q68DY9 489 aaPredicted RBP8.95□□□□□ -0.98
DEPDC4-209ENST00000550587 NPDC1Q9NQX5 325 aaPredicted RBP8.95□□□□□ -0.98
DEPDC4-209ENST00000550587 ZNF326Q5BKZ1 582 aaKnown RBP8.94□□□□□ -0.98
DEPDC4-209ENST00000550587 POTEAQ6S8J7 498 aa8.94□□□□□ -0.98
DEPDC4-209ENST00000550587 PADI6Q6TGC4 694 aa8.94□□□□□ -0.98
DEPDC4-209ENST00000550587 MPHOSPH9Q99550 1183 aa8.94□□□□□ -0.98
DEPDC4-209ENST00000550587 SPATA31A6Q5VVP1 1343 aa8.94□□□□□ -0.98
DEPDC4-209ENST00000550587 PIK3R4Q99570 1358 aa8.94□□□□□ -0.98
DEPDC4-209ENST00000550587 PHLPP1O60346 1717 aa8.94□□□□□ -0.98
DEPDC4-209ENST00000550587 MLLT3P42568 568 aaPredicted RBP8.93□□□□□ -0.98
DEPDC4-209ENST00000550587 NWD1Q149M9 1564 aa8.93□□□□□ -0.98
DEPDC4-209ENST00000550587 CHD2O14647 1828 aaKnown RBP8.92□□□□□ -0.98
DEPDC4-209ENST00000550587 ZFYVE9O95405 1425 aa8.92□□□□□ -0.98
DEPDC4-209ENST00000550587 NUP155O75694 1391 aa8.92□□□□□ -0.98
DEPDC4-209ENST00000550587 RNF40O75150 1001 aa8.92□□□□□ -0.98
DEPDC4-209ENST00000550587 NUTM2DQ5VT03 806 aaPredicted RBP8.92□□□□□ -0.98
DEPDC4-209ENST00000550587 RBM27Q9P2N5 1060 aaKnown RBP8.92□□□□□ -0.98
DEPDC4-209ENST00000550587 AMOTL2Q9Y2J4 779 aa8.92□□□□□ -0.98
DEPDC4-209ENST00000550587 TJAP1Q5JTD0 557 aa8.91□□□□□ -0.98
DEPDC4-209ENST00000550587 TTC13Q8NBP0 860 aa8.91□□□□□ -0.98
DEPDC4-209ENST00000550587 TMEM131LA2VDJ0 1609 aa8.91□□□□□ -0.98
DEPDC4-209ENST00000550587 DIP2AQ14689 1571 aa8.9□□□□□ -0.98
DEPDC4-209ENST00000550587 KCNV2Q8TDN2 545 aa8.9□□□□□ -0.98
DEPDC4-209ENST00000550587 TIMELESSQ9UNS1 1208 aa8.9□□□□□ -0.98
DEPDC4-209ENST00000550587 TRPM2O94759 1503 aa8.9□□□□□ -0.99
DEPDC4-209ENST00000550587 MYO5BQ9ULV0 1848 aa8.89□□□□□ -0.99
DEPDC4-209ENST00000550587 RXRBP28702 533 aa8.89□□□□□ -0.99
DEPDC4-209ENST00000550587 ARHGEF1Q92888 912 aaKnown RBP8.89□□□□□ -0.99
DEPDC4-209ENST00000550587 MTRQ99707 1265 aa8.89□□□□□ -0.99
DEPDC4-209ENST00000550587 UNC13BO14795 1591 aa8.88□□□□□ -0.99
DEPDC4-209ENST00000550587 NUTM2BA6NNL0 878 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-209ENST00000550587 NUTM2EB1AL46 878 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-209ENST00000550587 APLP1P51693 650 aa8.88□□□□□ -0.99
DEPDC4-209ENST00000550587 SWT1Q5T5J6 900 aaKnown RBP8.88□□□□□ -0.99
DEPDC4-209ENST00000550587 NUTM2AQ8IVF1 878 aaPredicted RBP8.88□□□□□ -0.99
DEPDC4-209ENST00000550587 LRRC59Q96AG4 307 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms