RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 NRDCO43847 1150 aa14.87□□□□□ -0.03
NR4A1-215ENST00000550557 PTMSP20962 102 aa14.87□□□□□ -0.03
NR4A1-215ENST00000550557 CLASRPQ8N2M8 674 aaKnown RBP14.87□□□□□ -0.03
NR4A1-215ENST00000550557 ZNF428Q96B54 188 aa14.87□□□□□ -0.03
NR4A1-215ENST00000550557 TBX22Q9Y458 520 aa14.87□□□□□ -0.03
NR4A1-215ENST00000550557 ZKSCAN1P17029 563 aaPredicted RBP14.87□□□□□ -0.03
NR4A1-215ENST00000550557 AAMPQ13685 434 aa14.87□□□□□ -0.03
NR4A1-215ENST00000550557 ABCA8O94911 1581 aa14.87□□□□□ -0.03
NR4A1-215ENST00000550557 SURF6O75683 361 aaKnown RBP14.86□□□□□ -0.03
NR4A1-215ENST00000550557 ANKRD24Q8TF21 1146 aa14.86□□□□□ -0.03
NR4A1-215ENST00000550557 CCDC57Q2TAC2 916 aa14.86□□□□□ -0.03
NR4A1-215ENST00000550557 RBM5P52756 815 aaKnown RBP eCLIP14.86□□□□□ -0.03
NR4A1-215ENST00000550557 EMILIN1Q9Y6C2 1016 aa14.86□□□□□ -0.03
NR4A1-215ENST00000550557 EIF2AK4Q9P2K8 1649 aaKnown RBP14.86□□□□□ -0.03
NR4A1-215ENST00000550557 ERICH2A1L162 156 aa14.86□□□□□ -0.03
NR4A1-215ENST00000550557 SRCIN1Q9C0H9 1055 aa14.85□□□□□ -0.03
NR4A1-215ENST00000550557 DDB1Q16531 1140 aa14.85□□□□□ -0.03
NR4A1-215ENST00000550557 IFNL2Q8IZJ0 200 aa14.85□□□□□ -0.03
NR4A1-215ENST00000550557 ARHGEF5Q12774 1597 aa14.85□□□□□ -0.03
NR4A1-215ENST00000550557 CABLES1Q8TDN4 633 aa14.85□□□□□ -0.03
NR4A1-215ENST00000550557 NBPF14Q5TI25 921 aa14.84□□□□□ -0.03
NR4A1-215ENST00000550557 ST18O60284 1047 aa14.83□□□□□ -0.03
NR4A1-215ENST00000550557 IKQ13123 557 aaPredicted RBP14.83□□□□□ -0.03
NR4A1-215ENST00000550557 TSR2Q969E8 191 aaKnown RBP14.83□□□□□ -0.03
NR4A1-215ENST00000550557 NFE2L2Q16236 605 aa14.83□□□□□ -0.04
NR4A1-215ENST00000550557 PARD3Q8TEW0 1356 aa14.83□□□□□ -0.04
NR4A1-215ENST00000550557 SPATA31E1Q6ZUB1 1445 aa14.82□□□□□ -0.04
NR4A1-215ENST00000550557 FAM184AQ8NB25 1140 aa14.82□□□□□ -0.04
NR4A1-215ENST00000550557 IGHMBP2P38935 993 aaKnown RBP14.82□□□□□ -0.04
NR4A1-215ENST00000550557 RNF20Q5VTR2 975 aa14.82□□□□□ -0.04
NR4A1-215ENST00000550557 NFXL1Q6ZNB6 911 aa14.82□□□□□ -0.04
NR4A1-215ENST00000550557 PDE3AQ14432 1141 aa14.82□□□□□ -0.04
NR4A1-215ENST00000550557 TESK2Q96S53 571 aa14.82□□□□□ -0.04
NR4A1-215ENST00000550557 CPLX1O14810 134 aa14.82□□□□□ -0.04
NR4A1-215ENST00000550557 CCDC158Q5M9N0 1113 aa14.82□□□□□ -0.04
NR4A1-215ENST00000550557 SF3A1Q15459 793 aaKnown RBP14.81□□□□□ -0.04
NR4A1-215ENST00000550557 AMER1Q5JTC6 1135 aaPredicted RBP14.81□□□□□ -0.04
NR4A1-215ENST00000550557 RALYLQ86SE5 291 aaKnown RBP14.81□□□□□ -0.04
NR4A1-215ENST00000550557 PANK1Q8TE04 598 aa14.81□□□□□ -0.04
NR4A1-215ENST00000550557 GZF1Q9H116 711 aaPredicted RBP14.81□□□□□ -0.04
NR4A1-215ENST00000550557 PHF14O94880 888 aa14.81□□□□□ -0.04
NR4A1-215ENST00000550557 SLFN5Q08AF3 891 aa14.81□□□□□ -0.04
NR4A1-215ENST00000550557 BACH2Q9BYV9 841 aa14.81□□□□□ -0.04
NR4A1-215ENST00000550557 TTC21AQ8NDW8 1320 aa14.8□□□□□ -0.04
NR4A1-215ENST00000550557 GOLGA6L3A6NEY3 463 aa14.8□□□□□ -0.04
NR4A1-215ENST00000550557 MCM10Q7L590 875 aa14.8□□□□□ -0.04
NR4A1-215ENST00000550557 RFC4P35249 363 aa14.8□□□□□ -0.04
NR4A1-215ENST00000550557 TAF7Q15545 349 aaPredicted RBP14.8□□□□□ -0.04
NR4A1-215ENST00000550557 CCDC85AQ96PX6 553 aaPredicted RBP14.8□□□□□ -0.04
NR4A1-215ENST00000550557 ACSBG1Q96GR2 724 aa14.8□□□□□ -0.04
NR4A1-215ENST00000550557 FMNL2Q96PY5 1086 aa14.8□□□□□ -0.04
NR4A1-215ENST00000550557 MBD5Q9P267 1494 aa14.8□□□□□ -0.04
NR4A1-215ENST00000550557 GNAI2P04899 355 aa14.8□□□□□ -0.04
NR4A1-215ENST00000550557 ZCRB1Q8TBF4 217 aaKnown RBP14.8□□□□□ -0.04
NR4A1-215ENST00000550557 TEX13AQ9BXU3 409 aaPredicted RBP14.8□□□□□ -0.04
NR4A1-215ENST00000550557 H3BQV1 296 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 REC8O95072 547 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 IFFO2Q5TF58 517 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 WDR63Q8IWG1 891 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 DNAJC2Q99543 621 aaKnown RBP14.79□□□□□ -0.04
NR4A1-215ENST00000550557 ZNF219Q9P2Y4 722 aaPredicted RBP14.79□□□□□ -0.04
NR4A1-215ENST00000550557 TTC21BQ7Z4L5 1316 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 NINLQ9Y2I6 1382 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 CCT4P50991 539 aaKnown RBP14.79□□□□□ -0.04
NR4A1-215ENST00000550557 TTC39AQ5SRH9 613 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 ERC1Q8IUD2 1116 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 MIS18AQ9NYP9 233 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 GBP4Q96PP9 640 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 MTMR7Q9Y216 660 aa14.79□□□□□ -0.04
NR4A1-215ENST00000550557 TRIM29Q14134 588 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 NFKBIBQ15653 356 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 FSD1Q9BTV5 496 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 CHAF1AQ13111 956 aaPredicted RBP14.78□□□□□ -0.04
NR4A1-215ENST00000550557 TMOD2Q9NZR1 351 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 CEP126Q9P2H0 1117 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 HSP90AB3PQ58FF7 597 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 RPGRQ92834 1020 aaKnown RBP14.78□□□□□ -0.04
NR4A1-215ENST00000550557 SIL1Q9H173 461 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 ANO2Q9NQ90 1003 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 BCAR3O75815 825 aa14.78□□□□□ -0.04
NR4A1-215ENST00000550557 NEO1Q92859 1461 aa14.77□□□□□ -0.04
NR4A1-215ENST00000550557 SLC3A2P08195 630 aaKnown RBP14.77□□□□□ -0.04
NR4A1-215ENST00000550557 ZSCAN29Q8IWY8 852 aaPredicted RBP14.77□□□□□ -0.04
NR4A1-215ENST00000550557 ANO8Q9HCE9 1232 aaPredicted RBP14.77□□□□□ -0.04
NR4A1-215ENST00000550557 COL17A1Q9UMD9 1497 aaPredicted RBP14.77□□□□□ -0.05
NR4A1-215ENST00000550557 SMARCC1Q92922 1105 aaPredicted RBP14.77□□□□□ -0.05
NR4A1-215ENST00000550557 SLAIN2Q9P270 581 aa14.77□□□□□ -0.05
NR4A1-215ENST00000550557 MAST1Q9Y2H9 1570 aa14.77□□□□□ -0.05
NR4A1-215ENST00000550557 MSNP26038 577 aaKnown RBP14.77□□□□□ -0.05
NR4A1-215ENST00000550557 LNPKQ9C0E8 428 aa14.76□□□□□ -0.05
NR4A1-215ENST00000550557 TMPOP42166 694 aaKnown RBP14.76□□□□□ -0.05
NR4A1-215ENST00000550557 PAXIP1Q6ZW49 1069 aaPredicted RBP14.76□□□□□ -0.05
NR4A1-215ENST00000550557 POLD1P28340 1107 aa14.76□□□□□ -0.05
NR4A1-215ENST00000550557 CCDC43Q96MW1 224 aaKnown RBP14.76□□□□□ -0.05
NR4A1-215ENST00000550557 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
NR4A1-215ENST00000550557 TRMT112Q9UI30 125 aaKnown RBP14.75□□□□□ -0.05
NR4A1-215ENST00000550557 THUMPD2Q9BTF0 503 aaKnown RBP14.75□□□□□ -0.05
NR4A1-215ENST00000550557 BTG4Q9NY30 223 aa14.75□□□□□ -0.05
NR4A1-215ENST00000550557 PER1O15534 1290 aaPredicted RBP14.75□□□□□ -0.05
NR4A1-215ENST00000550557 ATP2B2Q01814 1243 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms