RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 KNSTRNQ9Y448 316 aa26.59■■□□□ 1.85
DDX54-207ENST00000550016 CDK12Q9NYV4 1490 aaPredicted RBP26.59■■□□□ 1.85
DDX54-207ENST00000550016 ABCC6O95255 1503 aa26.59■■□□□ 1.85
DDX54-207ENST00000550016 GLI3P10071 1580 aa26.58■■□□□ 1.85
DDX54-207ENST00000550016 MAP2P11137 1827 aaKnown RBP26.56■■□□□ 1.84
DDX54-207ENST00000550016 AXIN2Q9Y2T1 843 aa26.56■■□□□ 1.84
DDX54-207ENST00000550016 COL5A2P05997 1499 aaPredicted RBP26.55■■□□□ 1.84
DDX54-207ENST00000550016 FBLN1P23142 703 aa26.54■■□□□ 1.84
DDX54-207ENST00000550016 SPATA31A5Q5VU36 1347 aa26.54■■□□□ 1.84
DDX54-207ENST00000550016 SPATA31A7Q8IWB4 1347 aa26.54■■□□□ 1.84
DDX54-207ENST00000550016 PER1O15534 1290 aaPredicted RBP26.53■■□□□ 1.84
DDX54-207ENST00000550016 NSD2O96028 1365 aa26.53■■□□□ 1.84
DDX54-207ENST00000550016 MAP3K19Q56UN5 1328 aa26.52■■□□□ 1.84
DDX54-207ENST00000550016 LARP1Q6PKG0 1096 aaKnown RBP26.52■■□□□ 1.84
DDX54-207ENST00000550016 RGS12O14924 1447 aa26.5■■□□□ 1.83
DDX54-207ENST00000550016 SPATA31A1Q5TZJ5 1347 aa26.5■■□□□ 1.83
DDX54-207ENST00000550016 IP6K1Q92551 441 aa26.5■■□□□ 1.83
DDX54-207ENST00000550016 AMPHP49418 695 aa26.49■■□□□ 1.83
DDX54-207ENST00000550016 RRS1Q15050 365 aaKnown RBP26.49■■□□□ 1.83
DDX54-207ENST00000550016 AMER1Q5JTC6 1135 aaPredicted RBP26.49■■□□□ 1.83
DDX54-207ENST00000550016 WDR17Q8IZU2 1322 aa26.48■■□□□ 1.83
DDX54-207ENST00000550016 ONECUT3O60422 494 aaPredicted RBP26.48■■□□□ 1.83
DDX54-207ENST00000550016 CRB1P82279 1406 aa26.48■■□□□ 1.83
DDX54-207ENST00000550016 BRWD3Q6RI45 1802 aa26.47■■□□□ 1.83
DDX54-207ENST00000550016 BLMP54132 1417 aaPredicted RBP26.47■■□□□ 1.83
DDX54-207ENST00000550016 MORC1Q86VD1 984 aa26.46■■□□□ 1.83
DDX54-207ENST00000550016 RTL1A6NKG5 1358 aa26.46■■□□□ 1.83
DDX54-207ENST00000550016 CSB-PGBD3P0DP91 1061 aa26.45■■□□□ 1.82
DDX54-207ENST00000550016 HOXC9P31274 260 aa26.45■■□□□ 1.82
DDX54-207ENST00000550016 FAM98CQ17RN3 349 aaKnown RBP26.45■■□□□ 1.82
DDX54-207ENST00000550016 TOM1L2Q6ZVM7 507 aa26.45■■□□□ 1.82
DDX54-207ENST00000550016 USP35Q9P2H5 1018 aa26.45■■□□□ 1.82
DDX54-207ENST00000550016 PEAK1Q9H792 1746 aa26.44■■□□□ 1.82
DDX54-207ENST00000550016 KIF24Q5T7B8 1368 aa26.44■■□□□ 1.82
DDX54-207ENST00000550016 TNNT2P45379 298 aaPredicted RBP26.43■■□□□ 1.82
DDX54-207ENST00000550016 SEPT12Q8IYM1 358 aa26.43■■□□□ 1.82
DDX54-207ENST00000550016 TCP11L2Q8N4U5 519 aa26.43■■□□□ 1.82
DDX54-207ENST00000550016 ANKRD24Q8TF21 1146 aa26.43■■□□□ 1.82
DDX54-207ENST00000550016 THRAP3Q9Y2W1 955 aaKnown RBP26.43■■□□□ 1.82
DDX54-207ENST00000550016 ERBB3P21860 1342 aa26.42■■□□□ 1.82
DDX54-207ENST00000550016 FAM208AQ9UK61 1670 aaKnown RBP26.42■■□□□ 1.82
DDX54-207ENST00000550016 NPC1L1Q9UHC9 1359 aa26.42■■□□□ 1.82
DDX54-207ENST00000550016 BARGINQ6ZT62 677 aa26.41■■□□□ 1.82
DDX54-207ENST00000550016 CARD10Q9BWT7 1032 aa26.41■■□□□ 1.82
DDX54-207ENST00000550016 EMILIN1Q9Y6C2 1016 aa26.41■■□□□ 1.82
DDX54-207ENST00000550016 THSD7AQ9UPZ6 1657 aa26.41■■□□□ 1.82
DDX54-207ENST00000550016 POLKQ9UBT6 870 aa26.4■■□□□ 1.82
DDX54-207ENST00000550016 RGPD2P0DJD1 1756 aa26.4■■□□□ 1.82
DDX54-207ENST00000550016 FLT4P35916 1363 aa26.39■■□□□ 1.82
DDX54-207ENST00000550016 A0A0G2JS52 829 aa26.39■■□□□ 1.82
DDX54-207ENST00000550016 MYT1Q01538 1121 aa26.39■■□□□ 1.82
DDX54-207ENST00000550016 WNK3Q9BYP7 1800 aa26.39■■□□□ 1.81
DDX54-207ENST00000550016 SOCS7O14512 581 aa26.38■■□□□ 1.81
DDX54-207ENST00000550016 PPM1GO15355 546 aaPredicted RBP26.38■■□□□ 1.81
DDX54-207ENST00000550016 CC2D1BQ5T0F9 858 aaKnown RBP26.38■■□□□ 1.81
DDX54-207ENST00000550016 LTV1Q96GA3 475 aaPredicted RBP26.38■■□□□ 1.81
DDX54-207ENST00000550016 INSRP06213 1382 aa26.37■■□□□ 1.81
DDX54-207ENST00000550016 NLRP2Q9NX02 1062 aa26.37■■□□□ 1.81
DDX54-207ENST00000550016 HSP90AB2PQ58FF8 381 aa26.36■■□□□ 1.81
DDX54-207ENST00000550016 PARP4Q9UKK3 1724 aaKnown RBP26.34■■□□□ 1.81
DDX54-207ENST00000550016 SMG6Q86US8 1419 aaKnown RBP26.32■■□□□ 1.8
DDX54-207ENST00000550016 DDX10Q13206 875 aaKnown RBP26.32■■□□□ 1.8
DDX54-207ENST00000550016 CNGB1Q14028 1251 aaPredicted RBP26.32■■□□□ 1.8
DDX54-207ENST00000550016 KRT27Q7Z3Y8 459 aa26.31■■□□□ 1.8
DDX54-207ENST00000550016 CDCA7Q9BWT1 371 aaPredicted RBP26.31■■□□□ 1.8
DDX54-207ENST00000550016 ZNF316A6NFI3 1004 aaPredicted RBP26.27■■□□□ 1.8
DDX54-207ENST00000550016 DISP2A7MBM2 1401 aa26.27■■□□□ 1.8
DDX54-207ENST00000550016 NBPF6Q5VWK0 638 aa26.26■■□□□ 1.79
DDX54-207ENST00000550016 NBPF4Q96M43 638 aa26.26■■□□□ 1.79
DDX54-207ENST00000550016 LRRC37A3O60309 1634 aa26.25■■□□□ 1.79
DDX54-207ENST00000550016 PDE3BQ13370 1112 aa26.25■■□□□ 1.79
DDX54-207ENST00000550016 IL2RBP14784 551 aa26.24■■□□□ 1.79
DDX54-207ENST00000550016 MTHFSP49914 203 aa26.24■■□□□ 1.79
DDX54-207ENST00000550016 DDB1Q16531 1140 aa26.23■■□□□ 1.79
DDX54-207ENST00000550016 EIF4A2Q14240 407 aaKnown RBP26.22■■□□□ 1.79
DDX54-207ENST00000550016 EXOC5O00471 708 aa26.21■■□□□ 1.79
DDX54-207ENST00000550016 USHBP1Q8N6Y0 703 aa26.2■■□□□ 1.78
DDX54-207ENST00000550016 UPF1Q92900 1129 aaKnown RBP eCLIP26.2■■□□□ 1.78
DDX54-207ENST00000550016 FAM182BQ5T319 152 aa26.18■■□□□ 1.78
DDX54-207ENST00000550016 EYA1Q99502 592 aa26.18■■□□□ 1.78
DDX54-207ENST00000550016 NCAPD2Q15021 1401 aa26.16■■□□□ 1.78
DDX54-207ENST00000550016 TNS2Q63HR2 1409 aa26.15■■□□□ 1.78
DDX54-207ENST00000550016 FAM196AQ6ZSG2 479 aa26.15■■□□□ 1.78
DDX54-207ENST00000550016 RAPGEF4Q8WZA2 1011 aa26.15■■□□□ 1.78
DDX54-207ENST00000550016 PPP2R1AP30153 589 aa26.14■■□□□ 1.78
DDX54-207ENST00000550016 PARD3Q8TEW0 1356 aa26.14■■□□□ 1.78
DDX54-207ENST00000550016 SBF2Q86WG5 1849 aa26.14■■□□□ 1.77
DDX54-207ENST00000550016 KAT6BQ8WYB5 2073 aa26.13■■□□□ 1.77
DDX54-207ENST00000550016 TATP17735 454 aaPredicted RBP26.13■■□□□ 1.77
DDX54-207ENST00000550016 MARCH10Q8NA82 808 aaPredicted RBP26.13■■□□□ 1.77
DDX54-207ENST00000550016 MEGF6O75095 1541 aa26.13■■□□□ 1.77
DDX54-207ENST00000550016 EP400Q96L91 3159 aa26.13■■□□□ 1.77
DDX54-207ENST00000550016 RGPD1P0DJD0 1748 aa26.12■■□□□ 1.77
DDX54-207ENST00000550016 IL13P35225 146 aa26.12■■□□□ 1.77
DDX54-207ENST00000550016 CCDC125Q86Z20 511 aa26.12■■□□□ 1.77
DDX54-207ENST00000550016 IGSF1Q8N6C5 1336 aa26.12■■□□□ 1.77
DDX54-207ENST00000550016 OVOS2A0A0G2JMS6 1433 aa26.11■■□□□ 1.77
DDX54-207ENST00000550016 SHANK3Q9BYB0 1731 aa26.11■■□□□ 1.77
DDX54-207ENST00000550016 ZCRB1Q8TBF4 217 aaKnown RBP26.1■■□□□ 1.77
DDX54-207ENST00000550016 DIAPH1O60610 1272 aaKnown RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms