RNA–Protein interactions for RNA: ENST00000549490.1

UBE2N-203, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 2

Gene UBE2N, Length 676 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-203ENST00000549490 BCL9O00512 1426 aa13.16□□□□□ -0.3
UBE2N-203ENST00000549490 GIGYF1O75420 1035 aaPredicted RBP13.16□□□□□ -0.3
UBE2N-203ENST00000549490 TOM1L2Q6ZVM7 507 aa13.16□□□□□ -0.3
UBE2N-203ENST00000549490 DCAF11Q8TEB1 546 aa13.16□□□□□ -0.3
UBE2N-203ENST00000549490 ARXQ96QS3 562 aa13.16□□□□□ -0.3
UBE2N-203ENST00000549490 AATKQ6ZMQ8 1374 aa13.15□□□□□ -0.3
UBE2N-203ENST00000549490 GPR162Q16538 588 aa13.14□□□□□ -0.31
UBE2N-203ENST00000549490 MAP3K5Q99683 1374 aa13.14□□□□□ -0.31
UBE2N-203ENST00000549490 LRRC37A3O60309 1634 aa13.13□□□□□ -0.31
UBE2N-203ENST00000549490 CDCA7Q9BWT1 371 aaPredicted RBP13.13□□□□□ -0.31
UBE2N-203ENST00000549490 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
UBE2N-203ENST00000549490 ITSN1Q15811 1721 aa13.13□□□□□ -0.31
UBE2N-203ENST00000549490 WDR17Q8IZU2 1322 aa13.12□□□□□ -0.31
UBE2N-203ENST00000549490 SBF2Q86WG5 1849 aa13.11□□□□□ -0.31
UBE2N-203ENST00000549490 NLRP6P59044 892 aa13.11□□□□□ -0.31
UBE2N-203ENST00000549490 STAC3Q96MF2 364 aa13.11□□□□□ -0.31
UBE2N-203ENST00000549490 EXOC5O00471 708 aa13.1□□□□□ -0.31
UBE2N-203ENST00000549490 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
UBE2N-203ENST00000549490 TOPAZ1Q8N9V7 1692 aa13.09□□□□□ -0.31
UBE2N-203ENST00000549490 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.31
UBE2N-203ENST00000549490 CHD4Q14839 1912 aa13.08□□□□□ -0.32
UBE2N-203ENST00000549490 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.32
UBE2N-203ENST00000549490 SRPK2P78362 688 aaKnown RBP13.08□□□□□ -0.32
UBE2N-203ENST00000549490 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
UBE2N-203ENST00000549490 ZNF827Q17R98 1081 aa13.07□□□□□ -0.32
UBE2N-203ENST00000549490 ARHGEF25Q86VW2 580 aa13.07□□□□□ -0.32
UBE2N-203ENST00000549490 PELP1Q8IZL8 1130 aaKnown RBP13.07□□□□□ -0.32
UBE2N-203ENST00000549490 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
UBE2N-203ENST00000549490 CABP2Q9NPB3 220 aa13.07□□□□□ -0.32
UBE2N-203ENST00000549490 SLIT3O75094 1523 aa13.07□□□□□ -0.32
UBE2N-203ENST00000549490 GOLGB1Q14789 3259 aaKnown RBP13.06□□□□□ -0.32
UBE2N-203ENST00000549490 CSB-PGBD3P0DP91 1061 aa13.06□□□□□ -0.32
UBE2N-203ENST00000549490 KLHL34Q8N239 644 aa13.06□□□□□ -0.32
UBE2N-203ENST00000549490 CABP1Q9NZU7 370 aa13.06□□□□□ -0.32
UBE2N-203ENST00000549490 USP6P35125 1406 aa13.05□□□□□ -0.32
UBE2N-203ENST00000549490 LRRC4BQ9NT99 713 aa13.05□□□□□ -0.32
UBE2N-203ENST00000549490 CPSF1Q10570 1443 aaKnown RBP13.05□□□□□ -0.32
UBE2N-203ENST00000549490 NLGN2Q8NFZ4 835 aa13.04□□□□□ -0.32
UBE2N-203ENST00000549490 SLC16A10Q8TF71 515 aa13.04□□□□□ -0.32
UBE2N-203ENST00000549490 COL18A1P39060 1754 aa13.04□□□□□ -0.32
UBE2N-203ENST00000549490 POLD1P28340 1107 aa13.03□□□□□ -0.32
UBE2N-203ENST00000549490 AKT1S1Q96B36 256 aa13.03□□□□□ -0.32
UBE2N-203ENST00000549490 TNS2Q63HR2 1409 aa13.03□□□□□ -0.32
UBE2N-203ENST00000549490 SHANK3Q9BYB0 1731 aa13.02□□□□□ -0.32
UBE2N-203ENST00000549490 SOX12O15370 315 aa13.02□□□□□ -0.33
UBE2N-203ENST00000549490 YBX3P16989 372 aaKnown RBP eCLIP13.02□□□□□ -0.333e-9■■■■□ 24.7
UBE2N-203ENST00000549490 NBPF1Q3BBV0 1214 aa13.02□□□□□ -0.33
UBE2N-203ENST00000549490 CCDC7Q96M83 1385 aa13.02□□□□□ -0.33
UBE2N-203ENST00000549490 PAPPAQ13219 1627 aa13.02□□□□□ -0.33
UBE2N-203ENST00000549490 KCNH5Q8NCM2 988 aa13.01□□□□□ -0.33
UBE2N-203ENST00000549490 RAB3GAP2Q9H2M9 1393 aa13□□□□□ -0.33
UBE2N-203ENST00000549490 PNPLA7Q6ZV29 1317 aa13□□□□□ -0.33
UBE2N-203ENST00000549490 CENPJQ9HC77 1338 aaPredicted RBP13□□□□□ -0.33
UBE2N-203ENST00000549490 GRIN3BO60391 1043 aa13□□□□□ -0.33
UBE2N-203ENST00000549490 WNK3Q9BYP7 1800 aa12.99□□□□□ -0.33
UBE2N-203ENST00000549490 AKAP12Q02952 1782 aa12.99□□□□□ -0.33
UBE2N-203ENST00000549490 TTC21BQ7Z4L5 1316 aa12.99□□□□□ -0.33
UBE2N-203ENST00000549490 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
UBE2N-203ENST00000549490 ATP10DQ9P241 1426 aa12.98□□□□□ -0.33
UBE2N-203ENST00000549490 HSPA6P17066 643 aa12.98□□□□□ -0.33
UBE2N-203ENST00000549490 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
UBE2N-203ENST00000549490 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
UBE2N-203ENST00000549490 NLRP2Q9NX02 1062 aa12.97□□□□□ -0.33
UBE2N-203ENST00000549490 TFCP2L1Q9NZI6 479 aa12.97□□□□□ -0.33
UBE2N-203ENST00000549490 TRPM1Q7Z4N2 1603 aa12.96□□□□□ -0.33
UBE2N-203ENST00000549490 IL2RBP14784 551 aa12.96□□□□□ -0.33
UBE2N-203ENST00000549490 KCNQ4P56696 695 aa12.96□□□□□ -0.33
UBE2N-203ENST00000549490 GPBP1L1Q9HC44 474 aaPredicted RBP12.96□□□□□ -0.33
UBE2N-203ENST00000549490 ABCC6O95255 1503 aa12.96□□□□□ -0.33
UBE2N-203ENST00000549490 ZNF692Q9BU19 519 aaPredicted RBP12.95□□□□□ -0.34
UBE2N-203ENST00000549490 ERBB3P21860 1342 aa12.94□□□□□ -0.34
UBE2N-203ENST00000549490 TTC21AQ8NDW8 1320 aa12.94□□□□□ -0.34
UBE2N-203ENST00000549490 NFAT5O94916 1531 aa12.94□□□□□ -0.34
UBE2N-203ENST00000549490 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
UBE2N-203ENST00000549490 BTAF1O14981 1849 aa12.92□□□□□ -0.34
UBE2N-203ENST00000549490 RGPD5Q99666 1765 aa12.92□□□□□ -0.34
UBE2N-203ENST00000549490 EVC2Q86UK5 1308 aa12.91□□□□□ -0.34
UBE2N-203ENST00000549490 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
UBE2N-203ENST00000549490 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
UBE2N-203ENST00000549490 DDX54Q8TDD1 881 aaKnown RBP12.91□□□□□ -0.34
UBE2N-203ENST00000549490 ANKRD24Q8TF21 1146 aa12.91□□□□□ -0.34
UBE2N-203ENST00000549490 ADCY9O60503 1353 aa12.91□□□□□ -0.34
UBE2N-203ENST00000549490 MSH5O43196 834 aa12.9□□□□□ -0.34
UBE2N-203ENST00000549490 PRIM1P49642 420 aaKnown RBP12.9□□□□□ -0.34
UBE2N-203ENST00000549490 MSL1Q68DK7 614 aa12.9□□□□□ -0.34
UBE2N-203ENST00000549490 KIAA1210Q9ULL0 1709 aa12.9□□□□□ -0.34
UBE2N-203ENST00000549490 SYTL4Q96C24 671 aaPredicted RBP12.89□□□□□ -0.35
UBE2N-203ENST00000549490 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
UBE2N-203ENST00000549490 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
UBE2N-203ENST00000549490 CD2APQ9Y5K6 639 aa12.88□□□□□ -0.35
UBE2N-203ENST00000549490 KTN1Q86UP2 1357 aaKnown RBP12.88□□□□□ -0.35
UBE2N-203ENST00000549490 QSER1Q2KHR3 1735 aa12.88□□□□□ -0.35
UBE2N-203ENST00000549490 NSD2O96028 1365 aa12.87□□□□□ -0.35
UBE2N-203ENST00000549490 USP31Q70CQ4 1352 aa12.87□□□□□ -0.35
UBE2N-203ENST00000549490 KIF3CO14782 793 aa12.87□□□□□ -0.35
UBE2N-203ENST00000549490 CCNL1Q9UK58 526 aaPredicted RBP12.87□□□□□ -0.35
UBE2N-203ENST00000549490 ANKRD36BQ8N2N9 1353 aa12.86□□□□□ -0.35
UBE2N-203ENST00000549490 NME9Q86XW9 330 aa12.86□□□□□ -0.35
UBE2N-203ENST00000549490 DNAJC5GQ8N7S2 189 aa12.86□□□□□ -0.35
UBE2N-203ENST00000549490 APLP1P51693 650 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms