RNA–Protein interactions for RNA: ENST00000548863.1

CNOT2-215, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-215ENST00000548863 TSEN34Q9BSV6 310 aaKnown RBP11.42□□□□□ -0.58
CNOT2-215ENST00000548863 GPBP1L1Q9HC44 474 aaPredicted RBP11.42□□□□□ -0.58
CNOT2-215ENST00000548863 SOS2Q07890 1332 aaPredicted RBP11.41□□□□□ -0.58
CNOT2-215ENST00000548863 FAM181BA6NEQ2 426 aa11.41□□□□□ -0.58
CNOT2-215ENST00000548863 SOBPA7XYQ1 873 aa11.41□□□□□ -0.58
CNOT2-215ENST00000548863 BMP2P12643 396 aa11.41□□□□□ -0.58
CNOT2-215ENST00000548863 C6orf118Q5T5N4 469 aa11.41□□□□□ -0.58
CNOT2-215ENST00000548863 GPSM3Q9Y4H4 160 aa11.41□□□□□ -0.58
CNOT2-215ENST00000548863 ARHGAP9Q9BRR9 750 aa11.4□□□□□ -0.58
CNOT2-215ENST00000548863 CARD14Q9BXL6 1004 aa11.4□□□□□ -0.58
CNOT2-215ENST00000548863 ZSCAN1Q8NBB4 408 aa11.39□□□□□ -0.59
CNOT2-215ENST00000548863 BCANQ96GW7 911 aa11.39□□□□□ -0.59
CNOT2-215ENST00000548863 NR6A1Q15406 480 aa11.38□□□□□ -0.59
CNOT2-215ENST00000548863 Q6ZVU0 165 aa11.38□□□□□ -0.59
CNOT2-215ENST00000548863 PPP1R26Q5T8A7 1209 aaPredicted RBP11.37□□□□□ -0.59
CNOT2-215ENST00000548863 PGPEP1Q9NXJ5 209 aa11.37□□□□□ -0.59
CNOT2-215ENST00000548863 PTK2Q05397 1052 aa11.36□□□□□ -0.59
CNOT2-215ENST00000548863 SLC10A4Q96EP9 437 aa11.36□□□□□ -0.59
CNOT2-215ENST00000548863 KCTD15Q96SI1 283 aaPredicted RBP11.36□□□□□ -0.59
CNOT2-215ENST00000548863 OCSTAMPQ9BR26 566 aa11.36□□□□□ -0.59
CNOT2-215ENST00000548863 DHX9Q08211 1270 aaKnown RBP11.35□□□□□ -0.59
CNOT2-215ENST00000548863 ZBTB33Q86T24 672 aa11.35□□□□□ -0.59
CNOT2-215ENST00000548863 DNMT3LQ9UJW3 386 aa11.35□□□□□ -0.59
CNOT2-215ENST00000548863 PPFIA3O75145 1194 aa11.34□□□□□ -0.59
CNOT2-215ENST00000548863 GOPCQ9HD26 462 aa11.34□□□□□ -0.59
CNOT2-215ENST00000548863 AP1G2O75843 785 aa11.32□□□□□ -0.6
CNOT2-215ENST00000548863 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.32□□□□□ -0.6
CNOT2-215ENST00000548863 PNMA1Q8ND90 353 aa11.32□□□□□ -0.6
CNOT2-215ENST00000548863 TTLL8A6PVC2 850 aa11.31□□□□□ -0.6
CNOT2-215ENST00000548863 SPINT1O43278 529 aa11.31□□□□□ -0.6
CNOT2-215ENST00000548863 ADAM32Q8TC27 787 aa11.3□□□□□ -0.6
CNOT2-215ENST00000548863 CBLBQ13191 982 aa11.29□□□□□ -0.6
CNOT2-215ENST00000548863 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
CNOT2-215ENST00000548863 INTS6LQ5JSJ4 861 aaKnown RBP11.29□□□□□ -0.6
CNOT2-215ENST00000548863 ATP1B4Q9UN42 357 aaPredicted RBP11.29□□□□□ -0.6
CNOT2-215ENST00000548863 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
CNOT2-215ENST00000548863 RFC5P40937 340 aa11.28□□□□□ -0.6
CNOT2-215ENST00000548863 EPS8L1Q8TE68 723 aa11.28□□□□□ -0.6
CNOT2-215ENST00000548863 HMX1Q9NP08 348 aaPredicted RBP11.28□□□□□ -0.6
CNOT2-215ENST00000548863 PTSQ03393 145 aa11.25□□□□□ -0.61
CNOT2-215ENST00000548863 NANOS1Q8WY41 292 aaKnown RBP11.24□□□□□ -0.61
CNOT2-215ENST00000548863 TMEM259Q4ZIN3 620 aa11.23□□□□□ -0.61
CNOT2-215ENST00000548863 ESPNB1AK53 854 aa11.22□□□□□ -0.61
CNOT2-215ENST00000548863 FIGNL2A6NMB9 653 aa11.21□□□□□ -0.61
CNOT2-215ENST00000548863 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
CNOT2-215ENST00000548863 TRIM34Q9BYJ4 488 aa11.21□□□□□ -0.61
CNOT2-215ENST00000548863 SLC35F4A4IF30 521 aa11.2□□□□□ -0.62
CNOT2-215ENST00000548863 DZIP3Q86Y13 1208 aaKnown RBP11.2□□□□□ -0.62
CNOT2-215ENST00000548863 CCDC155Q8N6L0 562 aa11.2□□□□□ -0.62
CNOT2-215ENST00000548863 PCMTD1Q96MG8 357 aaPredicted RBP11.2□□□□□ -0.62
CNOT2-215ENST00000548863 LILRA1O75019 489 aa11.19□□□□□ -0.62
CNOT2-215ENST00000548863 CTSOP43234 321 aaPredicted RBP11.19□□□□□ -0.62
CNOT2-215ENST00000548863 ZNF784Q8NCA9 323 aaPredicted RBP11.19□□□□□ -0.62
CNOT2-215ENST00000548863 TRIM52Q96A61 297 aa11.19□□□□□ -0.62
CNOT2-215ENST00000548863 AGBL1Q96MI9 1066 aa11.19□□□□□ -0.62
CNOT2-215ENST00000548863 TMPRSS4Q9NRS4 437 aa11.19□□□□□ -0.62
CNOT2-215ENST00000548863 ERVH48-1M5A8F1 160 aa11.18□□□□□ -0.62
CNOT2-215ENST00000548863 GPR161Q8N6U8 529 aaKnown RBP11.18□□□□□ -0.62
CNOT2-215ENST00000548863 INSM2Q96T92 566 aaPredicted RBP11.18□□□□□ -0.62
CNOT2-215ENST00000548863 ADH1AP07327 375 aa11.17□□□□□ -0.62
CNOT2-215ENST00000548863 RELBQ01201 579 aa11.17□□□□□ -0.62
CNOT2-215ENST00000548863 KRT76Q01546 638 aa11.16□□□□□ -0.62
CNOT2-215ENST00000548863 KDF1Q8NAX2 398 aaPredicted RBP11.16□□□□□ -0.62
CNOT2-215ENST00000548863 RNF217Q8TC41 542 aa11.16□□□□□ -0.62
CNOT2-215ENST00000548863 ADD1P35611 737 aaKnown RBP11.15□□□□□ -0.62
CNOT2-215ENST00000548863 CCDC125Q86Z20 511 aa11.15□□□□□ -0.62
CNOT2-215ENST00000548863 ZBBXA8MT70 800 aa11.14□□□□□ -0.63
CNOT2-215ENST00000548863 ITGA6P23229 1130 aa11.14□□□□□ -0.63
CNOT2-215ENST00000548863 GJD4Q96KN9 370 aaPredicted RBP11.14□□□□□ -0.63
CNOT2-215ENST00000548863 PTGIRP43119 386 aa11.13□□□□□ -0.63
CNOT2-215ENST00000548863 ZNF395Q9H8N7 513 aaPredicted RBP11.13□□□□□ -0.63
CNOT2-215ENST00000548863 POLMQ9NP87 494 aaPredicted RBP11.13□□□□□ -0.63
CNOT2-215ENST00000548863 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
CNOT2-215ENST00000548863 SOCS7O14512 581 aa11.11□□□□□ -0.63
CNOT2-215ENST00000548863 SLC24A1O60721 1099 aa11.11□□□□□ -0.63
CNOT2-215ENST00000548863 RAB15P59190 212 aa11.11□□□□□ -0.63
CNOT2-215ENST00000548863 CNTNAP3BQ96NU0 1288 aa11.11□□□□□ -0.63
CNOT2-215ENST00000548863 COL25A1Q9BXS0 654 aaPredicted RBP11.11□□□□□ -0.63
CNOT2-215ENST00000548863 CNTNAP3Q9BZ76 1288 aa11.11□□□□□ -0.63
CNOT2-215ENST00000548863 FOXD4L5Q5VV16 416 aaPredicted RBP11.1□□□□□ -0.63
CNOT2-215ENST00000548863 MCCD1P59942 119 aaPredicted RBP11.09□□□□□ -0.63
CNOT2-215ENST00000548863 NEUROD2Q15784 382 aa11.09□□□□□ -0.63
CNOT2-215ENST00000548863 IL27Q8NEV9 243 aa11.09□□□□□ -0.63
CNOT2-215ENST00000548863 FBXO45P0C2W1 286 aa11.08□□□□□ -0.64
CNOT2-215ENST00000548863 RNF144AP50876 292 aaPredicted RBP11.08□□□□□ -0.64
CNOT2-215ENST00000548863 KCNMA1Q12791 1236 aa11.08□□□□□ -0.64
CNOT2-215ENST00000548863 SV2AQ7L0J3 742 aa11.08□□□□□ -0.64
CNOT2-215ENST00000548863 BANK1Q8NDB2 785 aa11.08□□□□□ -0.64
CNOT2-215ENST00000548863 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
CNOT2-215ENST00000548863 SLURP2P0DP57 97 aa11.07□□□□□ -0.64
CNOT2-215ENST00000548863 RNFT1Q5M7Z0 435 aa11.07□□□□□ -0.64
CNOT2-215ENST00000548863 VWA5B2Q8N398 1253 aa11.07□□□□□ -0.64
CNOT2-215ENST00000548863 LYSMD3Q7Z3D4 306 aa11.06□□□□□ -0.64
CNOT2-215ENST00000548863 ZNF592Q92610 1267 aa11.06□□□□□ -0.64
CNOT2-215ENST00000548863 CYLDQ9NQC7 956 aa11.06□□□□□ -0.64
CNOT2-215ENST00000548863 GPC1P35052 558 aa11.05□□□□□ -0.64
CNOT2-215ENST00000548863 RNF20Q5VTR2 975 aa11.05□□□□□ -0.64
CNOT2-215ENST00000548863 PCDHB9Q9Y5E1 797 aa11.05□□□□□ -0.64
CNOT2-215ENST00000548863 ATP5J2-PTCD1G3V325 749 aa11.04□□□□□ -0.64
CNOT2-215ENST00000548863 GSK3AP49840 483 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms