RNA–Protein interactions for RNA: ENST00000548140.1

HECTD4-206, Transcript of HECT domain E3 ubiquitin protein ligase 4, humanhuman

TSL 3

Gene HECTD4, Length 1,426 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HECTD4-206ENST00000548140 RTL1A6NKG5 1358 aa21.88■■□□□ 1.09
HECTD4-206ENST00000548140 CHRNA2Q15822 529 aa21.88■■□□□ 1.09
HECTD4-206ENST00000548140 HSP90AB2PQ58FF8 381 aa21.88■■□□□ 1.09
HECTD4-206ENST00000548140 SPATA31A6Q5VVP1 1343 aa21.87■■□□□ 1.09
HECTD4-206ENST00000548140 ADAMTS2O95450 1211 aa21.87■■□□□ 1.09
HECTD4-206ENST00000548140 INSRP06213 1382 aa21.86■■□□□ 1.09
HECTD4-206ENST00000548140 DIAPH1O60610 1272 aaKnown RBP21.85■■□□□ 1.09
HECTD4-206ENST00000548140 COL3A1P02461 1466 aaPredicted RBP21.83■■□□□ 1.09
HECTD4-206ENST00000548140 FAM83GA6ND36 823 aa21.83■■□□□ 1.09
HECTD4-206ENST00000548140 AXIN2Q9Y2T1 843 aa21.83■■□□□ 1.09
HECTD4-206ENST00000548140 LTV1Q96GA3 475 aaPredicted RBP21.82■■□□□ 1.08
HECTD4-206ENST00000548140 NUDCQ9Y266 331 aa21.82■■□□□ 1.08
HECTD4-206ENST00000548140 EIF4A2Q14240 407 aaKnown RBP21.81■■□□□ 1.08
HECTD4-206ENST00000548140 BLMP54132 1417 aaPredicted RBP21.81■■□□□ 1.08
HECTD4-206ENST00000548140 IL13P35225 146 aa21.8■■□□□ 1.08
HECTD4-206ENST00000548140 WDR43Q15061 677 aaKnown RBP eCLIP21.8■■□□□ 1.08
HECTD4-206ENST00000548140 FAM9BQ8IZU0 186 aa21.8■■□□□ 1.08
HECTD4-206ENST00000548140 PNISRQ8TF01 805 aaKnown RBP21.8■■□□□ 1.08
HECTD4-206ENST00000548140 COL18A1P39060 1754 aa21.8■■□□□ 1.08
HECTD4-206ENST00000548140 U2SURPO15042 1029 aaKnown RBP21.8■■□□□ 1.08
HECTD4-206ENST00000548140 ABCC6O95255 1503 aa21.79■■□□□ 1.08
HECTD4-206ENST00000548140 ANKRD24Q8TF21 1146 aa21.79■■□□□ 1.08
HECTD4-206ENST00000548140 LRP6O75581 1613 aa21.78■■□□□ 1.08
HECTD4-206ENST00000548140 COL14A1Q05707 1796 aaKnown RBP21.77■■□□□ 1.08
HECTD4-206ENST00000548140 MEX3CQ5U5Q3 659 aaKnown RBP21.77■■□□□ 1.08
HECTD4-206ENST00000548140 BTG4Q9NY30 223 aa21.77■■□□□ 1.08
HECTD4-206ENST00000548140 RGPD5Q99666 1765 aa21.77■■□□□ 1.08
HECTD4-206ENST00000548140 LMO7Q8WWI1 1683 aa21.76■■□□□ 1.07
HECTD4-206ENST00000548140 CAMTA1Q9Y6Y1 1673 aa21.76■■□□□ 1.07
HECTD4-206ENST00000548140 U2AF1L5P0DN76 240 aaPredicted RBP21.76■■□□□ 1.07
HECTD4-206ENST00000548140 U2AF1Q01081 240 aaKnown RBP eCLIP21.76■■□□□ 1.07
HECTD4-206ENST00000548140 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
HECTD4-206ENST00000548140 EVA1CP58658 441 aa21.75■■□□□ 1.07
HECTD4-206ENST00000548140 C8orf37Q96NL8 207 aa21.75■■□□□ 1.07
HECTD4-206ENST00000548140 ERBB3P21860 1342 aa21.75■■□□□ 1.07
HECTD4-206ENST00000548140 NGLY1Q96IV0 654 aa21.74■■□□□ 1.07
HECTD4-206ENST00000548140 ADAMTS8Q9UP79 889 aa21.74■■□□□ 1.07
HECTD4-206ENST00000548140 EYA1Q99502 592 aa21.73■■□□□ 1.07
HECTD4-206ENST00000548140 STRN4Q9NRL3 753 aa21.73■■□□□ 1.07
HECTD4-206ENST00000548140 COL5A2P05997 1499 aaPredicted RBP21.72■■□□□ 1.07
HECTD4-206ENST00000548140 HMOX1P09601 288 aa21.71■■□□□ 1.07
HECTD4-206ENST00000548140 NBPF6Q5VWK0 638 aa21.71■■□□□ 1.07
HECTD4-206ENST00000548140 NBPF4Q96M43 638 aa21.71■■□□□ 1.07
HECTD4-206ENST00000548140 NLRP2Q9NX02 1062 aa21.71■■□□□ 1.07
HECTD4-206ENST00000548140 PLCH1Q4KWH8 1693 aa21.71■■□□□ 1.07
HECTD4-206ENST00000548140 ILDR2Q71H61 639 aa21.7■■□□□ 1.06
HECTD4-206ENST00000548140 WDR17Q8IZU2 1322 aa21.7■■□□□ 1.06
HECTD4-206ENST00000548140 IGSF1Q8N6C5 1336 aa21.7■■□□□ 1.06
HECTD4-206ENST00000548140 SULT6B1Q6IMI4 303 aa21.69■■□□□ 1.06
HECTD4-206ENST00000548140 TOM1L2Q6ZVM7 507 aa21.69■■□□□ 1.06
HECTD4-206ENST00000548140 USHBP1Q8N6Y0 703 aa21.69■■□□□ 1.06
HECTD4-206ENST00000548140 SLIT2O94813 1529 aa21.69■■□□□ 1.06
HECTD4-206ENST00000548140 LARP1Q6PKG0 1096 aaKnown RBP21.68■■□□□ 1.06
HECTD4-206ENST00000548140 RGPD1P0DJD0 1748 aa21.67■■□□□ 1.06
HECTD4-206ENST00000548140 AEBP1Q8IUX7 1158 aa21.67■■□□□ 1.06
HECTD4-206ENST00000548140 RGPD2P0DJD1 1756 aa21.67■■□□□ 1.06
HECTD4-206ENST00000548140 FCHSD2O94868 740 aa21.66■■□□□ 1.06
HECTD4-206ENST00000548140 FNBP4Q8N3X1 1017 aaPredicted RBP21.66■■□□□ 1.06
HECTD4-206ENST00000548140 UNC5CLQ8IV45 518 aa21.65■■□□□ 1.06
HECTD4-206ENST00000548140 CCDC146Q8IYE0 955 aa21.65■■□□□ 1.06
HECTD4-206ENST00000548140 RSPH6AQ9H0K4 717 aa21.65■■□□□ 1.06
HECTD4-206ENST00000548140 NWD2Q9ULI1 1742 aa21.65■■□□□ 1.06
HECTD4-206ENST00000548140 FAM208AQ9UK61 1670 aaKnown RBP21.64■■□□□ 1.06
HECTD4-206ENST00000548140 PNNQ9H307 717 aaKnown RBP21.64■■□□□ 1.06
HECTD4-206ENST00000548140 USP21Q9UK80 565 aa21.64■■□□□ 1.06
HECTD4-206ENST00000548140 AFF2P51816 1311 aa21.64■■□□□ 1.05
HECTD4-206ENST00000548140 PRKAR2BP31323 418 aa21.63■■□□□ 1.05
HECTD4-206ENST00000548140 CARD10Q9BWT7 1032 aa21.63■■□□□ 1.05
HECTD4-206ENST00000548140 NRAPQ86VF7 1730 aa21.63■■□□□ 1.05
HECTD4-206ENST00000548140 CRB1P82279 1406 aa21.63■■□□□ 1.05
HECTD4-206ENST00000548140 KDRP35968 1356 aa21.62■■□□□ 1.05
HECTD4-206ENST00000548140 BCL9LQ86UU0 1499 aa21.62■■□□□ 1.05
HECTD4-206ENST00000548140 RUNDC1Q96C34 613 aa21.62■■□□□ 1.05
HECTD4-206ENST00000548140 USP35Q9P2H5 1018 aa21.62■■□□□ 1.05
HECTD4-206ENST00000548140 NEFMP07197 916 aa21.61■■□□□ 1.05
HECTD4-206ENST00000548140 PLEKHF1Q96S99 279 aa21.61■■□□□ 1.05
HECTD4-206ENST00000548140 CCDC9Q9Y3X0 531 aaKnown RBP21.61■■□□□ 1.05
HECTD4-206ENST00000548140 NCAPD2Q15021 1401 aa21.6■■□□□ 1.05
HECTD4-206ENST00000548140 MAPK8IP3Q9UPT6 1336 aa21.59■■□□□ 1.05
HECTD4-206ENST00000548140 VPS72Q15906 364 aa21.58■■□□□ 1.05
HECTD4-206ENST00000548140 RAPGEF4Q8WZA2 1011 aa21.58■■□□□ 1.05
HECTD4-206ENST00000548140 SENP3-EIF4A1A0A087X0R7 540 aa21.57■■□□□ 1.04
HECTD4-206ENST00000548140 PHACTR3Q96KR7 559 aa21.57■■□□□ 1.04
HECTD4-206ENST00000548140 YTHDC1Q96MU7 727 aaKnown RBP21.57■■□□□ 1.04
HECTD4-206ENST00000548140 SPATA31A1Q5TZJ5 1347 aa21.57■■□□□ 1.04
HECTD4-206ENST00000548140 SPATA31A5Q5VU36 1347 aa21.57■■□□□ 1.04
HECTD4-206ENST00000548140 SPATA31A7Q8IWB4 1347 aa21.57■■□□□ 1.04
HECTD4-206ENST00000548140 TATP17735 454 aaPredicted RBP21.56■■□□□ 1.04
HECTD4-206ENST00000548140 APAF1O14727 1248 aa21.55■■□□□ 1.04
HECTD4-206ENST00000548140 TCP11L2Q8N4U5 519 aa21.55■■□□□ 1.04
HECTD4-206ENST00000548140 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.55■■□□□ 1.04
HECTD4-206ENST00000548140 SOCS7O14512 581 aa21.54■■□□□ 1.04
HECTD4-206ENST00000548140 IL2RBP14784 551 aa21.54■■□□□ 1.04
HECTD4-206ENST00000548140 HNRNPUQ00839 825 aaKnown RBP eCLIP21.54■■□□□ 1.04
HECTD4-206ENST00000548140 TRPC5Q9UL62 973 aaPredicted RBP21.54■■□□□ 1.04
HECTD4-206ENST00000548140 THRAP3Q9Y2W1 955 aaKnown RBP21.54■■□□□ 1.04
HECTD4-206ENST00000548140 MEGF6O75095 1541 aa21.52■■□□□ 1.04
HECTD4-206ENST00000548140 NEUROD2Q15784 382 aa21.52■■□□□ 1.04
HECTD4-206ENST00000548140 PLEKHO1Q53GL0 409 aaPredicted RBP21.52■■□□□ 1.04
HECTD4-206ENST00000548140 QTRT2Q9H974 415 aaKnown RBP21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 239.9 ms