RNA–Protein interactions for RNA: ENST00000548130.5

SMARCC2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 5

Gene SMARCC2, Length 1,238 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-205ENST00000548130 PIK3C2AO00443 1686 aa12.32□□□□□ -0.44
SMARCC2-205ENST00000548130 USP31Q70CQ4 1352 aa12.31□□□□□ -0.44
SMARCC2-205ENST00000548130 MON2Q7Z3U7 1717 aa12.31□□□□□ -0.44
SMARCC2-205ENST00000548130 CRYBG1Q9Y4K1 1723 aa12.31□□□□□ -0.44
SMARCC2-205ENST00000548130 NRKQ7Z2Y5 1582 aa12.31□□□□□ -0.44
SMARCC2-205ENST00000548130 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
SMARCC2-205ENST00000548130 CPDO75976 1380 aa12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 PHRF1Q9P1Y6 1649 aaKnown RBP12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 VPS72Q15906 364 aa12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 PIP4P2Q8N4L2 257 aa12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 KCNH5Q8NCM2 988 aa12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 GJD4Q96KN9 370 aaPredicted RBP12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 STRN4Q9NRL3 753 aa12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 MARF1Q9Y4F3 1742 aaKnown RBP12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 SLIT3O75094 1523 aa12.3□□□□□ -0.44
SMARCC2-205ENST00000548130 COG3Q96JB2 828 aa12.29□□□□□ -0.44
SMARCC2-205ENST00000548130 GGNBP2Q9H3C7 697 aa12.29□□□□□ -0.44
SMARCC2-205ENST00000548130 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
SMARCC2-205ENST00000548130 NSD3Q9BZ95 1437 aa12.28□□□□□ -0.44
SMARCC2-205ENST00000548130 FYB1O15117 783 aa12.28□□□□□ -0.44
SMARCC2-205ENST00000548130 FXR2P51116 673 aaKnown RBP eCLIP12.28□□□□□ -0.442e-7■■□□□ 14.2
SMARCC2-205ENST00000548130 EVA1CP58658 441 aa12.28□□□□□ -0.44
SMARCC2-205ENST00000548130 ARHGEF25Q86VW2 580 aa12.28□□□□□ -0.44
SMARCC2-205ENST00000548130 PANK3Q9H999 370 aa12.28□□□□□ -0.44
SMARCC2-205ENST00000548130 OVOS2A0A0J9YW53 1432 aa12.28□□□□□ -0.44
SMARCC2-205ENST00000548130 RGS12O14924 1447 aa12.28□□□□□ -0.44
SMARCC2-205ENST00000548130 OVOS2Q6IE36 1432 aa12.28□□□□□ -0.44
SMARCC2-205ENST00000548130 PLCH1Q4KWH8 1693 aa12.27□□□□□ -0.45
SMARCC2-205ENST00000548130 FBLN1P23142 703 aa12.27□□□□□ -0.45
SMARCC2-205ENST00000548130 CLEC11AQ9Y240 323 aa12.27□□□□□ -0.45
SMARCC2-205ENST00000548130 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.45
SMARCC2-205ENST00000548130 MYOM1P52179 1685 aa12.26□□□□□ -0.45
SMARCC2-205ENST00000548130 LARP1Q6PKG0 1096 aaKnown RBP12.26□□□□□ -0.45
SMARCC2-205ENST00000548130 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
SMARCC2-205ENST00000548130 AATKQ6ZMQ8 1374 aa12.26□□□□□ -0.45
SMARCC2-205ENST00000548130 CAMTA1Q9Y6Y1 1673 aa12.26□□□□□ -0.45
SMARCC2-205ENST00000548130 USP35Q9P2H5 1018 aa12.25□□□□□ -0.45
SMARCC2-205ENST00000548130 SPATA31A5Q5VU36 1347 aa12.25□□□□□ -0.45
SMARCC2-205ENST00000548130 SPATA31A7Q8IWB4 1347 aa12.25□□□□□ -0.45
SMARCC2-205ENST00000548130 CDK12Q9NYV4 1490 aaPredicted RBP12.25□□□□□ -0.45
SMARCC2-205ENST00000548130 NFAT5O94916 1531 aa12.25□□□□□ -0.45
SMARCC2-205ENST00000548130 A0A0G2JS52 829 aa12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 GLI3P10071 1580 aa12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 MYT1Q01538 1121 aa12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 FAM98CQ17RN3 349 aaKnown RBP12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 WASHC2AQ641Q2 1341 aa12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 SEPT12Q8IYM1 358 aa12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 CCDC7Q96M83 1385 aa12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 NWD2Q9ULI1 1742 aa12.24□□□□□ -0.45
SMARCC2-205ENST00000548130 NRAPQ86VF7 1730 aa12.23□□□□□ -0.45
SMARCC2-205ENST00000548130 CGNL1Q0VF96 1302 aa12.23□□□□□ -0.45
SMARCC2-205ENST00000548130 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
SMARCC2-205ENST00000548130 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
SMARCC2-205ENST00000548130 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
SMARCC2-205ENST00000548130 COL5A2P05997 1499 aaPredicted RBP12.22□□□□□ -0.45
SMARCC2-205ENST00000548130 MAP3K19Q56UN5 1328 aa12.22□□□□□ -0.45
SMARCC2-205ENST00000548130 LMO7Q8WWI1 1683 aa12.22□□□□□ -0.45
SMARCC2-205ENST00000548130 ONECUT3O60422 494 aaPredicted RBP12.21□□□□□ -0.45
SMARCC2-205ENST00000548130 AMPHP49418 695 aa12.21□□□□□ -0.45
SMARCC2-205ENST00000548130 TOM1L2Q6ZVM7 507 aa12.21□□□□□ -0.45
SMARCC2-205ENST00000548130 TCP11L2Q8N4U5 519 aa12.21□□□□□ -0.45
SMARCC2-205ENST00000548130 USP54Q70EL1 1684 aa12.21□□□□□ -0.45
SMARCC2-205ENST00000548130 IP6K1Q92551 441 aa12.2□□□□□ -0.46
SMARCC2-205ENST00000548130 LTV1Q96GA3 475 aaPredicted RBP12.2□□□□□ -0.46
SMARCC2-205ENST00000548130 KNSTRNQ9Y448 316 aa12.2□□□□□ -0.46
SMARCC2-205ENST00000548130 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
SMARCC2-205ENST00000548130 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
SMARCC2-205ENST00000548130 ZEB1P37275 1124 aaPredicted RBP12.19□□□□□ -0.46
SMARCC2-205ENST00000548130 TNNT2P45379 298 aaPredicted RBP12.19□□□□□ -0.46
SMARCC2-205ENST00000548130 ANKRD24Q8TF21 1146 aa12.19□□□□□ -0.46
SMARCC2-205ENST00000548130 COL18A1P39060 1754 aa12.19□□□□□ -0.46
SMARCC2-205ENST00000548130 CRB1P82279 1406 aa12.19□□□□□ -0.46
SMARCC2-205ENST00000548130 ERBB3P21860 1342 aa12.18□□□□□ -0.46
SMARCC2-205ENST00000548130 HOXC9P31274 260 aa12.18□□□□□ -0.46
SMARCC2-205ENST00000548130 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
SMARCC2-205ENST00000548130 EMILIN1Q9Y6C2 1016 aa12.18□□□□□ -0.46
SMARCC2-205ENST00000548130 PPM1GO15355 546 aaPredicted RBP12.17□□□□□ -0.46
SMARCC2-205ENST00000548130 AMER1Q5JTC6 1135 aaPredicted RBP12.17□□□□□ -0.46
SMARCC2-205ENST00000548130 KRT27Q7Z3Y8 459 aa12.17□□□□□ -0.46
SMARCC2-205ENST00000548130 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMARCC2-205ENST00000548130 CARD10Q9BWT7 1032 aa12.17□□□□□ -0.46
SMARCC2-205ENST00000548130 NLRP2Q9NX02 1062 aa12.17□□□□□ -0.46
SMARCC2-205ENST00000548130 PER1O15534 1290 aaPredicted RBP12.16□□□□□ -0.46
SMARCC2-205ENST00000548130 CNGB1Q14028 1251 aaPredicted RBP12.16□□□□□ -0.46
SMARCC2-205ENST00000548130 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
SMARCC2-205ENST00000548130 THRAP3Q9Y2W1 955 aaKnown RBP12.16□□□□□ -0.46
SMARCC2-205ENST00000548130 KIF20BQ96Q89 1820 aa12.16□□□□□ -0.46
SMARCC2-205ENST00000548130 BLMP54132 1417 aaPredicted RBP12.15□□□□□ -0.46
SMARCC2-205ENST00000548130 HSP90AB2PQ58FF8 381 aa12.15□□□□□ -0.46
SMARCC2-205ENST00000548130 CC2D1BQ5T0F9 858 aaKnown RBP12.15□□□□□ -0.46
SMARCC2-205ENST00000548130 FAM182BQ5T319 152 aa12.15□□□□□ -0.46
SMARCC2-205ENST00000548130 POLKQ9UBT6 870 aa12.15□□□□□ -0.46
SMARCC2-205ENST00000548130 ABCC6O95255 1503 aa12.15□□□□□ -0.46
SMARCC2-205ENST00000548130 RTL1A6NKG5 1358 aa12.15□□□□□ -0.46
SMARCC2-205ENST00000548130 NSD2O96028 1365 aa12.15□□□□□ -0.46
SMARCC2-205ENST00000548130 LTN1O94822 1766 aa12.13□□□□□ -0.47
SMARCC2-205ENST00000548130 RGPD5Q99666 1765 aa12.13□□□□□ -0.47
SMARCC2-205ENST00000548130 PRR29P0C7W0 189 aa12.13□□□□□ -0.47
SMARCC2-205ENST00000548130 PDE3BQ13370 1112 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms