RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 AXIN2Q9Y2T1 843 aa15.2■□□□□ 0.02
GCN1-202ENST00000547263 PARP4Q9UKK3 1724 aaKnown RBP15.2■□□□□ 0.02
GCN1-202ENST00000547263 KIF7Q2M1P5 1343 aa15.19■□□□□ 0.02
GCN1-202ENST00000547263 BARGINQ6ZT62 677 aa15.19■□□□□ 0.02
GCN1-202ENST00000547263 BLMP54132 1417 aaPredicted RBP15.18■□□□□ 0.02
GCN1-202ENST00000547263 FAM208AQ9UK61 1670 aaKnown RBP15.18■□□□□ 0.02
GCN1-202ENST00000547263 WDR17Q8IZU2 1322 aa15.17■□□□□ 0.02
GCN1-202ENST00000547263 LARP1Q6PKG0 1096 aaKnown RBP15.17■□□□□ 0.02
GCN1-202ENST00000547263 RTL1A6NKG5 1358 aa15.16■□□□□ 0.02
GCN1-202ENST00000547263 KIF24Q5T7B8 1368 aa15.16■□□□□ 0.02
GCN1-202ENST00000547263 SEPT12Q8IYM1 358 aa15.16■□□□□ 0.02
GCN1-202ENST00000547263 COG3Q96JB2 828 aa15.16■□□□□ 0.02
GCN1-202ENST00000547263 THRAP3Q9Y2W1 955 aaKnown RBP15.16■□□□□ 0.02
GCN1-202ENST00000547263 PEAK1Q9H792 1746 aa15.16■□□□□ 0.02
GCN1-202ENST00000547263 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
GCN1-202ENST00000547263 ERBB3P21860 1342 aa15.16■□□□□ 0.02
GCN1-202ENST00000547263 CCDC7Q96M83 1385 aa15.15■□□□□ 0.02
GCN1-202ENST00000547263 UPF1Q92900 1129 aaKnown RBP eCLIP15.15■□□□□ 0.02
GCN1-202ENST00000547263 MAP3K19Q56UN5 1328 aa15.15■□□□□ 0.02
GCN1-202ENST00000547263 NSD2O96028 1365 aa15.14■□□□□ 0.01
GCN1-202ENST00000547263 IP6K1Q92551 441 aa15.14■□□□□ 0.01
GCN1-202ENST00000547263 GGNBP2Q9H3C7 697 aa15.14■□□□□ 0.01
GCN1-202ENST00000547263 STRN4Q9NRL3 753 aa15.14■□□□□ 0.01
GCN1-202ENST00000547263 CGNL1Q0VF96 1302 aa15.14■□□□□ 0.01
GCN1-202ENST00000547263 WASHC2AQ641Q2 1341 aa15.14■□□□□ 0.01
GCN1-202ENST00000547263 LRRC37A3O60309 1634 aa15.14■□□□□ 0.01
GCN1-202ENST00000547263 PER1O15534 1290 aaPredicted RBP15.13■□□□□ 0.01
GCN1-202ENST00000547263 FAM98CQ17RN3 349 aaKnown RBP15.13■□□□□ 0.01
GCN1-202ENST00000547263 TCP11L2Q8N4U5 519 aa15.13■□□□□ 0.01
GCN1-202ENST00000547263 CARD10Q9BWT7 1032 aa15.13■□□□□ 0.01
GCN1-202ENST00000547263 PANK3Q9H999 370 aa15.13■□□□□ 0.01
GCN1-202ENST00000547263 EVA1CP58658 441 aa15.12■□□□□ 0.01
GCN1-202ENST00000547263 MAP2P11137 1827 aaKnown RBP15.12■□□□□ 0.01
GCN1-202ENST00000547263 SOX12O15370 315 aa15.11■□□□□ 0.01
GCN1-202ENST00000547263 CCDC9Q9Y3X0 531 aaKnown RBP15.11■□□□□ 0.01
GCN1-202ENST00000547263 SMG6Q86US8 1419 aaKnown RBP15.1■□□□□ 0.01
GCN1-202ENST00000547263 FBLN1P23142 703 aa15.1■□□□□ 0.01
GCN1-202ENST00000547263 HOXC9P31274 260 aa15.1■□□□□ 0.01
GCN1-202ENST00000547263 NCAPD2Q15021 1401 aa15.09■□□□□ 0.01
GCN1-202ENST00000547263 RGPD2P0DJD1 1756 aa15.09■□□□□ 0.01
GCN1-202ENST00000547263 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
GCN1-202ENST00000547263 KRT27Q7Z3Y8 459 aa15.09■□□□□ 0.01
GCN1-202ENST00000547263 INSRP06213 1382 aa15.09■□□□□ 0.01
GCN1-202ENST00000547263 NPC1L1Q9UHC9 1359 aa15.09■□□□□ 0.01
GCN1-202ENST00000547263 EP400Q96L91 3159 aa15.08■□□□□ 0
GCN1-202ENST00000547263 FLT4P35916 1363 aa15.08■□□□□ 0
GCN1-202ENST00000547263 BCL9O00512 1426 aa15.08■□□□□ 0
GCN1-202ENST00000547263 TNS1Q9HBL0 1735 aaKnown RBP15.07■□□□□ 0
GCN1-202ENST00000547263 TOM1L2Q6ZVM7 507 aa15.07■□□□□ 0
GCN1-202ENST00000547263 ANKRD24Q8TF21 1146 aa15.07■□□□□ 0
GCN1-202ENST00000547263 CDCA7Q9BWT1 371 aaPredicted RBP15.07■□□□□ 0
GCN1-202ENST00000547263 RGPD1P0DJD0 1748 aa15.06■□□□□ 0
GCN1-202ENST00000547263 ZBTB7CA1YPR0 619 aa15.06■□□□□ 0
GCN1-202ENST00000547263 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
GCN1-202ENST00000547263 POLR3GLQ9BT43 218 aa15.06■□□□□ 0
GCN1-202ENST00000547263 SBF2Q86WG5 1849 aa15.06■□□□□ 0
GCN1-202ENST00000547263 CCDC125Q86Z20 511 aa15.05■□□□□ -0
GCN1-202ENST00000547263 USP35Q9P2H5 1018 aa15.05■□□□□ -0
GCN1-202ENST00000547263 SHANK3Q9BYB0 1731 aa15.04■□□□□ -0
GCN1-202ENST00000547263 TNS2Q63HR2 1409 aa15.04■□□□□ -0
GCN1-202ENST00000547263 POLKQ9UBT6 870 aa15.04■□□□□ -0
GCN1-202ENST00000547263 AMPHP49418 695 aa15.03■□□□□ -0
GCN1-202ENST00000547263 EMILIN1Q9Y6C2 1016 aa15.03■□□□□ -0
GCN1-202ENST00000547263 HSP90AB2PQ58FF8 381 aa15.02■□□□□ -0
GCN1-202ENST00000547263 KNSTRNQ9Y448 316 aa15.02■□□□□ -0
GCN1-202ENST00000547263 CSB-PGBD3P0DP91 1061 aa15.01□□□□□ -0.01
GCN1-202ENST00000547263 OVOS2A0A0G2JMS6 1433 aa15□□□□□ -0.01
GCN1-202ENST00000547263 FAM196AQ6ZSG2 479 aa15□□□□□ -0.01
GCN1-202ENST00000547263 PKD1L3Q7Z443 1732 aa15□□□□□ -0.01
GCN1-202ENST00000547263 PLEKHG2Q9H7P9 1386 aa14.99□□□□□ -0.01
GCN1-202ENST00000547263 RGPD3A6NKT7 1758 aaPredicted RBP14.99□□□□□ -0.01
GCN1-202ENST00000547263 RGPD4Q7Z3J3 1758 aa14.99□□□□□ -0.01
GCN1-202ENST00000547263 MEGF6O75095 1541 aa14.99□□□□□ -0.01
GCN1-202ENST00000547263 IL2RBP14784 551 aa14.99□□□□□ -0.01
GCN1-202ENST00000547263 DDB1Q16531 1140 aa14.99□□□□□ -0.01
GCN1-202ENST00000547263 NBPF6Q5VWK0 638 aa14.99□□□□□ -0.01
GCN1-202ENST00000547263 NBPF4Q96M43 638 aa14.99□□□□□ -0.01
GCN1-202ENST00000547263 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
GCN1-202ENST00000547263 A0A0G2JS52 829 aa14.98□□□□□ -0.01
GCN1-202ENST00000547263 MYT1Q01538 1121 aa14.98□□□□□ -0.01
GCN1-202ENST00000547263 PDE3BQ13370 1112 aa14.98□□□□□ -0.01
GCN1-202ENST00000547263 ZEB1P37275 1124 aaPredicted RBP14.97□□□□□ -0.01
GCN1-202ENST00000547263 FAM182BQ5T319 152 aa14.97□□□□□ -0.01
GCN1-202ENST00000547263 MARCH10Q8NA82 808 aaPredicted RBP14.97□□□□□ -0.01
GCN1-202ENST00000547263 NHSQ6T4R5 1651 aa14.97□□□□□ -0.01
GCN1-202ENST00000547263 MORC1Q86VD1 984 aa14.96□□□□□ -0.01
GCN1-202ENST00000547263 RREB1Q92766 1687 aa14.96□□□□□ -0.01
GCN1-202ENST00000547263 EXOC5O00471 708 aa14.95□□□□□ -0.02
GCN1-202ENST00000547263 LTV1Q96GA3 475 aaPredicted RBP14.95□□□□□ -0.02
GCN1-202ENST00000547263 IGSF1Q8N6C5 1336 aa14.94□□□□□ -0.02
GCN1-202ENST00000547263 EIF4A2Q14240 407 aaKnown RBP14.94□□□□□ -0.02
GCN1-202ENST00000547263 COL3A1P02461 1466 aaPredicted RBP14.94□□□□□ -0.02
GCN1-202ENST00000547263 EYA1Q99502 592 aa14.93□□□□□ -0.02
GCN1-202ENST00000547263 KDRP35968 1356 aa14.92□□□□□ -0.02
GCN1-202ENST00000547263 PARD3Q8TEW0 1356 aa14.91□□□□□ -0.02
GCN1-202ENST00000547263 TNNT2P45379 298 aaPredicted RBP14.91□□□□□ -0.02
GCN1-202ENST00000547263 NUP188Q5SRE5 1749 aa14.9□□□□□ -0.02
GCN1-202ENST00000547263 TRIM37O94972 964 aa14.9□□□□□ -0.02
GCN1-202ENST00000547263 DEFB132Q7Z7B7 95 aa14.9□□□□□ -0.02
GCN1-202ENST00000547263 DOT1LQ8TEK3 1739 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms