RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 CCDC9Q9Y3X0 531 aaKnown RBP26.55■■□□□ 1.84
SDR39U1-203ENST00000544691 GLI3P10071 1580 aa26.54■■□□□ 1.84
SDR39U1-203ENST00000544691 PER1O15534 1290 aaPredicted RBP26.54■■□□□ 1.84
SDR39U1-203ENST00000544691 MAP3K19Q56UN5 1328 aa26.52■■□□□ 1.84
SDR39U1-203ENST00000544691 EVA1CP58658 441 aa26.52■■□□□ 1.84
SDR39U1-203ENST00000544691 RRS1Q15050 365 aaKnown RBP26.52■■□□□ 1.84
SDR39U1-203ENST00000544691 AMER1Q5JTC6 1135 aaPredicted RBP26.51■■□□□ 1.83
SDR39U1-203ENST00000544691 LARP1Q6PKG0 1096 aaKnown RBP26.51■■□□□ 1.83
SDR39U1-203ENST00000544691 RGPD5Q99666 1765 aa26.51■■□□□ 1.83
SDR39U1-203ENST00000544691 ABCC6O95255 1503 aa26.5■■□□□ 1.83
SDR39U1-203ENST00000544691 ANKRD26Q9UPS8 1709 aa26.5■■□□□ 1.83
SDR39U1-203ENST00000544691 RGS12O14924 1447 aa26.49■■□□□ 1.83
SDR39U1-203ENST00000544691 SPATA31A5Q5VU36 1347 aa26.48■■□□□ 1.83
SDR39U1-203ENST00000544691 SPATA31A7Q8IWB4 1347 aa26.48■■□□□ 1.83
SDR39U1-203ENST00000544691 NSD2O96028 1365 aa26.48■■□□□ 1.83
SDR39U1-203ENST00000544691 CDK12Q9NYV4 1490 aaPredicted RBP26.47■■□□□ 1.83
SDR39U1-203ENST00000544691 TNNT2P45379 298 aaPredicted RBP26.47■■□□□ 1.83
SDR39U1-203ENST00000544691 USP35Q9P2H5 1018 aa26.46■■□□□ 1.83
SDR39U1-203ENST00000544691 IP6K1Q92551 441 aa26.45■■□□□ 1.83
SDR39U1-203ENST00000544691 SPATA31A1Q5TZJ5 1347 aa26.45■■□□□ 1.83
SDR39U1-203ENST00000544691 AMPHP49418 695 aa26.44■■□□□ 1.82
SDR39U1-203ENST00000544691 HOXC9P31274 260 aa26.44■■□□□ 1.82
SDR39U1-203ENST00000544691 WDR17Q8IZU2 1322 aa26.44■■□□□ 1.82
SDR39U1-203ENST00000544691 EMILIN1Q9Y6C2 1016 aa26.44■■□□□ 1.82
SDR39U1-203ENST00000544691 CRB1P82279 1406 aa26.43■■□□□ 1.82
SDR39U1-203ENST00000544691 ERBB3P21860 1342 aa26.43■■□□□ 1.82
SDR39U1-203ENST00000544691 FAM98CQ17RN3 349 aaKnown RBP26.43■■□□□ 1.82
SDR39U1-203ENST00000544691 PEAK1Q9H792 1746 aa26.42■■□□□ 1.82
SDR39U1-203ENST00000544691 BLMP54132 1417 aaPredicted RBP26.42■■□□□ 1.82
SDR39U1-203ENST00000544691 CC2D1BQ5T0F9 858 aaKnown RBP26.42■■□□□ 1.82
SDR39U1-203ENST00000544691 MORC1Q86VD1 984 aa26.42■■□□□ 1.82
SDR39U1-203ENST00000544691 RTL1A6NKG5 1358 aa26.41■■□□□ 1.82
SDR39U1-203ENST00000544691 CSB-PGBD3P0DP91 1061 aa26.41■■□□□ 1.82
SDR39U1-203ENST00000544691 CNGB1Q14028 1251 aaPredicted RBP26.41■■□□□ 1.82
SDR39U1-203ENST00000544691 TOM1L2Q6ZVM7 507 aa26.41■■□□□ 1.82
SDR39U1-203ENST00000544691 ANKRD24Q8TF21 1146 aa26.4■■□□□ 1.82
SDR39U1-203ENST00000544691 PPM1GO15355 546 aaPredicted RBP26.39■■□□□ 1.81
SDR39U1-203ENST00000544691 ONECUT3O60422 494 aaPredicted RBP26.39■■□□□ 1.81
SDR39U1-203ENST00000544691 LTV1Q96GA3 475 aaPredicted RBP26.39■■□□□ 1.81
SDR39U1-203ENST00000544691 POLKQ9UBT6 870 aa26.39■■□□□ 1.81
SDR39U1-203ENST00000544691 FLT4P35916 1363 aa26.38■■□□□ 1.81
SDR39U1-203ENST00000544691 MAP2P11137 1827 aaKnown RBP26.38■■□□□ 1.81
SDR39U1-203ENST00000544691 SEPT12Q8IYM1 358 aa26.38■■□□□ 1.81
SDR39U1-203ENST00000544691 TCP11L2Q8N4U5 519 aa26.38■■□□□ 1.81
SDR39U1-203ENST00000544691 NPC1L1Q9UHC9 1359 aa26.37■■□□□ 1.81
SDR39U1-203ENST00000544691 HSP90AB2PQ58FF8 381 aa26.37■■□□□ 1.81
SDR39U1-203ENST00000544691 A0A0G2JS52 829 aa26.36■■□□□ 1.81
SDR39U1-203ENST00000544691 MYT1Q01538 1121 aa26.36■■□□□ 1.81
SDR39U1-203ENST00000544691 KIF24Q5T7B8 1368 aa26.36■■□□□ 1.81
SDR39U1-203ENST00000544691 DDX10Q13206 875 aaKnown RBP26.35■■□□□ 1.81
SDR39U1-203ENST00000544691 THSD7AQ9UPZ6 1657 aa26.34■■□□□ 1.81
SDR39U1-203ENST00000544691 BARGINQ6ZT62 677 aa26.34■■□□□ 1.81
SDR39U1-203ENST00000544691 CARD10Q9BWT7 1032 aa26.34■■□□□ 1.81
SDR39U1-203ENST00000544691 NLRP2Q9NX02 1062 aa26.34■■□□□ 1.81
SDR39U1-203ENST00000544691 INSRP06213 1382 aa26.34■■□□□ 1.81
SDR39U1-203ENST00000544691 THRAP3Q9Y2W1 955 aaKnown RBP26.32■■□□□ 1.8
SDR39U1-203ENST00000544691 SMG6Q86US8 1419 aaKnown RBP26.31■■□□□ 1.8
SDR39U1-203ENST00000544691 BRWD3Q6RI45 1802 aa26.31■■□□□ 1.8
SDR39U1-203ENST00000544691 EP400Q96L91 3159 aa26.29■■□□□ 1.8
SDR39U1-203ENST00000544691 RGPD2P0DJD1 1756 aa26.28■■□□□ 1.8
SDR39U1-203ENST00000544691 FAM208AQ9UK61 1670 aaKnown RBP26.28■■□□□ 1.8
SDR39U1-203ENST00000544691 ZNF316A6NFI3 1004 aaPredicted RBP26.27■■□□□ 1.8
SDR39U1-203ENST00000544691 NBPF6Q5VWK0 638 aa26.26■■□□□ 1.79
SDR39U1-203ENST00000544691 NBPF4Q96M43 638 aa26.26■■□□□ 1.79
SDR39U1-203ENST00000544691 DISP2A7MBM2 1401 aa26.26■■□□□ 1.79
SDR39U1-203ENST00000544691 WNK3Q9BYP7 1800 aa26.26■■□□□ 1.79
SDR39U1-203ENST00000544691 SOCS7O14512 581 aa26.25■■□□□ 1.79
SDR39U1-203ENST00000544691 KRT27Q7Z3Y8 459 aa26.24■■□□□ 1.79
SDR39U1-203ENST00000544691 USHBP1Q8N6Y0 703 aa26.24■■□□□ 1.79
SDR39U1-203ENST00000544691 PARP4Q9UKK3 1724 aaKnown RBP26.23■■□□□ 1.79
SDR39U1-203ENST00000544691 MTHFSP49914 203 aa26.23■■□□□ 1.79
SDR39U1-203ENST00000544691 LRRC37A3O60309 1634 aa26.22■■□□□ 1.79
SDR39U1-203ENST00000544691 EIF4A2Q14240 407 aaKnown RBP26.22■■□□□ 1.79
SDR39U1-203ENST00000544691 FAM182BQ5T319 152 aa26.22■■□□□ 1.79
SDR39U1-203ENST00000544691 IL2RBP14784 551 aa26.19■■□□□ 1.78
SDR39U1-203ENST00000544691 CDCA7Q9BWT1 371 aaPredicted RBP26.19■■□□□ 1.78
SDR39U1-203ENST00000544691 DDB1Q16531 1140 aa26.18■■□□□ 1.78
SDR39U1-203ENST00000544691 PDE3BQ13370 1112 aa26.17■■□□□ 1.78
SDR39U1-203ENST00000544691 EYA1Q99502 592 aa26.17■■□□□ 1.78
SDR39U1-203ENST00000544691 MEGF6O75095 1541 aa26.16■■□□□ 1.78
SDR39U1-203ENST00000544691 PARD3Q8TEW0 1356 aa26.16■■□□□ 1.78
SDR39U1-203ENST00000544691 NCAPD2Q15021 1401 aa26.14■■□□□ 1.78
SDR39U1-203ENST00000544691 PPP2R1AP30153 589 aa26.14■■□□□ 1.78
SDR39U1-203ENST00000544691 TNS2Q63HR2 1409 aa26.14■■□□□ 1.77
SDR39U1-203ENST00000544691 UPF1Q92900 1129 aaKnown RBP eCLIP26.14■■□□□ 1.77
SDR39U1-203ENST00000544691 EXOC5O00471 708 aa26.12■■□□□ 1.77
SDR39U1-203ENST00000544691 IL13P35225 146 aa26.12■■□□□ 1.77
SDR39U1-203ENST00000544691 IGSF1Q8N6C5 1336 aa26.11■■□□□ 1.77
SDR39U1-203ENST00000544691 COL3A1P02461 1466 aaPredicted RBP26.1■■□□□ 1.77
SDR39U1-203ENST00000544691 MARCH10Q8NA82 808 aaPredicted RBP26.1■■□□□ 1.77
SDR39U1-203ENST00000544691 RAPGEF4Q8WZA2 1011 aa26.09■■□□□ 1.77
SDR39U1-203ENST00000544691 OVOS2A0A0G2JMS6 1433 aa26.09■■□□□ 1.77
SDR39U1-203ENST00000544691 RGPD1P0DJD0 1748 aa26.08■■□□□ 1.77
SDR39U1-203ENST00000544691 DIAPH1O60610 1272 aaKnown RBP26.06■■□□□ 1.76
SDR39U1-203ENST00000544691 TATP17735 454 aaPredicted RBP26.06■■□□□ 1.76
SDR39U1-203ENST00000544691 FAM196AQ6ZSG2 479 aa26.06■■□□□ 1.76
SDR39U1-203ENST00000544691 AEBP1Q8IUX7 1158 aa26.06■■□□□ 1.76
SDR39U1-203ENST00000544691 RALBP1Q15311 655 aa26.05■■□□□ 1.76
SDR39U1-203ENST00000544691 ZCRB1Q8TBF4 217 aaKnown RBP26.04■■□□□ 1.76
SDR39U1-203ENST00000544691 SHANK3Q9BYB0 1731 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 100.8 ms