RNA–Protein interactions for RNA: ENST00000544381.3

MDH1-216, Transcript of malate dehydrogenase 1, humanhuman

TSL 2 BASIC

Gene MDH1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-216ENST00000544381 C8orf37Q96NL8 207 aa13.79□□□□□ -0.2
MDH1-216ENST00000544381 CENPJQ9HC77 1338 aaPredicted RBP13.79□□□□□ -0.2
MDH1-216ENST00000544381 PTCH1Q13635 1447 aa13.78□□□□□ -0.2
MDH1-216ENST00000544381 LRRC59Q96AG4 307 aaKnown RBP13.78□□□□□ -0.2
MDH1-216ENST00000544381 QTRT2Q9H974 415 aaKnown RBP13.78□□□□□ -0.2
MDH1-216ENST00000544381 ROBO2Q9HCK4 1378 aa13.78□□□□□ -0.2
MDH1-216ENST00000544381 MARF1Q9Y4F3 1742 aaKnown RBP13.78□□□□□ -0.2
MDH1-216ENST00000544381 SOS2Q07890 1332 aaPredicted RBP13.77□□□□□ -0.21
MDH1-216ENST00000544381 ATRNO75882 1429 aa13.77□□□□□ -0.21
MDH1-216ENST00000544381 STK26Q9P289 416 aa13.76□□□□□ -0.21
MDH1-216ENST00000544381 BOLA1Q9Y3E2 137 aa13.76□□□□□ -0.21
MDH1-216ENST00000544381 PHF8Q9UPP1 1060 aa13.75□□□□□ -0.21
MDH1-216ENST00000544381 SBNO2Q9Y2G9 1366 aa13.75□□□□□ -0.21
MDH1-216ENST00000544381 CCER2I3L3R5 266 aa13.74□□□□□ -0.21
MDH1-216ENST00000544381 ORAI2Q96SN7 254 aa13.74□□□□□ -0.21
MDH1-216ENST00000544381 QRICH2Q9H0J4 1663 aa13.74□□□□□ -0.21
MDH1-216ENST00000544381 YTHDC2Q9H6S0 1430 aaKnown RBP13.74□□□□□ -0.21
MDH1-216ENST00000544381 ARHGEF28Q8N1W1 1705 aaKnown RBP13.73□□□□□ -0.21
MDH1-216ENST00000544381 PXDNQ92626 1479 aa13.73□□□□□ -0.21
MDH1-216ENST00000544381 ADAMTS2O95450 1211 aa13.73□□□□□ -0.21
MDH1-216ENST00000544381 BCL9LQ86UU0 1499 aa13.72□□□□□ -0.21
MDH1-216ENST00000544381 FNBP4Q8N3X1 1017 aaPredicted RBP13.72□□□□□ -0.21
MDH1-216ENST00000544381 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
MDH1-216ENST00000544381 POGKQ9P215 609 aa13.72□□□□□ -0.21
MDH1-216ENST00000544381 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.72□□□□□ -0.21
MDH1-216ENST00000544381 CDC42BPGQ6DT37 1551 aa13.72□□□□□ -0.21
MDH1-216ENST00000544381 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
MDH1-216ENST00000544381 NLRP6P59044 892 aa13.71□□□□□ -0.21
MDH1-216ENST00000544381 NGLY1Q96IV0 654 aa13.7□□□□□ -0.22
MDH1-216ENST00000544381 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
MDH1-216ENST00000544381 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
MDH1-216ENST00000544381 PRKRIP1Q9H875 184 aaPredicted RBP13.7□□□□□ -0.22
MDH1-216ENST00000544381 GLI3P10071 1580 aa13.7□□□□□ -0.22
MDH1-216ENST00000544381 BRWD3Q6RI45 1802 aa13.7□□□□□ -0.22
MDH1-216ENST00000544381 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
MDH1-216ENST00000544381 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
MDH1-216ENST00000544381 PANK3Q9H999 370 aa13.69□□□□□ -0.22
MDH1-216ENST00000544381 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.22
MDH1-216ENST00000544381 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
MDH1-216ENST00000544381 USP21Q9UK80 565 aa13.68□□□□□ -0.22
MDH1-216ENST00000544381 ABCC11Q96J66 1382 aa13.68□□□□□ -0.22
MDH1-216ENST00000544381 DLC1Q96QB1 1528 aa13.68□□□□□ -0.22
MDH1-216ENST00000544381 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
MDH1-216ENST00000544381 PUS7Q96PZ0 661 aaKnown RBP13.66□□□□□ -0.22
MDH1-216ENST00000544381 TMEM121BQ9BXQ6 578 aaPredicted RBP13.66□□□□□ -0.22
MDH1-216ENST00000544381 TRPC5Q9UL62 973 aaPredicted RBP13.66□□□□□ -0.22
MDH1-216ENST00000544381 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
MDH1-216ENST00000544381 MFRPQ9BY79 579 aa13.65□□□□□ -0.22
MDH1-216ENST00000544381 KNDC1Q76NI1 1749 aa13.65□□□□□ -0.22
MDH1-216ENST00000544381 FMN2Q9NZ56 1722 aa13.65□□□□□ -0.22
MDH1-216ENST00000544381 PER1O15534 1290 aaPredicted RBP13.64□□□□□ -0.23
MDH1-216ENST00000544381 CENPBP07199 599 aaPredicted RBP13.64□□□□□ -0.23
MDH1-216ENST00000544381 SIRT1Q96EB6 747 aa13.64□□□□□ -0.23
MDH1-216ENST00000544381 KNSTRNQ9Y448 316 aa13.64□□□□□ -0.23
MDH1-216ENST00000544381 SLIT2O94813 1529 aa13.64□□□□□ -0.23
MDH1-216ENST00000544381 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
MDH1-216ENST00000544381 ABCA3Q99758 1704 aa13.64□□□□□ -0.23
MDH1-216ENST00000544381 MINK1Q8N4C8 1332 aaPredicted RBP13.64□□□□□ -0.23
MDH1-216ENST00000544381 MYOM1P52179 1685 aa13.64□□□□□ -0.23
MDH1-216ENST00000544381 TECPR2O15040 1411 aa13.64□□□□□ -0.23
MDH1-216ENST00000544381 RALBP1Q15311 655 aa13.64□□□□□ -0.23
MDH1-216ENST00000544381 USP32Q8NFA0 1604 aa13.63□□□□□ -0.23
MDH1-216ENST00000544381 SRPK2P78362 688 aaKnown RBP13.63□□□□□ -0.23
MDH1-216ENST00000544381 WAPLQ7Z5K2 1190 aa13.63□□□□□ -0.23
MDH1-216ENST00000544381 MICALL2Q8IY33 904 aa13.63□□□□□ -0.23
MDH1-216ENST00000544381 HS6ST3Q8IZP7 471 aa13.63□□□□□ -0.23
MDH1-216ENST00000544381 TMC1Q8TDI8 760 aa13.63□□□□□ -0.23
MDH1-216ENST00000544381 RGPD8O14715 1765 aaPredicted RBP13.62□□□□□ -0.23
MDH1-216ENST00000544381 TULP4Q9NRJ4 1543 aa13.62□□□□□ -0.23
MDH1-216ENST00000544381 SNPHO15079 494 aa13.62□□□□□ -0.23
MDH1-216ENST00000544381 XPCQ01831 940 aaPredicted RBP13.62□□□□□ -0.23
MDH1-216ENST00000544381 PLCH1Q4KWH8 1693 aa13.61□□□□□ -0.23
MDH1-216ENST00000544381 LCE2DQ5TA82 110 aaPredicted RBP13.61□□□□□ -0.23
MDH1-216ENST00000544381 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
MDH1-216ENST00000544381 NPHP3Q7Z494 1330 aa13.6□□□□□ -0.23
MDH1-216ENST00000544381 PLEKHH1Q9ULM0 1364 aa13.6□□□□□ -0.23
MDH1-216ENST00000544381 LRP5O75197 1615 aa13.6□□□□□ -0.23
MDH1-216ENST00000544381 CC2D1BQ5T0F9 858 aaKnown RBP13.6□□□□□ -0.23
MDH1-216ENST00000544381 GJD4Q96KN9 370 aaPredicted RBP13.6□□□□□ -0.23
MDH1-216ENST00000544381 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
MDH1-216ENST00000544381 KIF1AQ12756 1690 aa13.59□□□□□ -0.23
MDH1-216ENST00000544381 POTEMA6NI47 508 aa13.59□□□□□ -0.23
MDH1-216ENST00000544381 SLC12A5Q9H2X9 1139 aa13.59□□□□□ -0.23
MDH1-216ENST00000544381 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.23
MDH1-216ENST00000544381 NINLQ9Y2I6 1382 aa13.58□□□□□ -0.24
MDH1-216ENST00000544381 FOXO3O43524 673 aa13.58□□□□□ -0.24
MDH1-216ENST00000544381 ESCO1Q5FWF5 840 aa13.58□□□□□ -0.24
MDH1-216ENST00000544381 POTEGQ6S5H5 508 aa13.58□□□□□ -0.24
MDH1-216ENST00000544381 NWD2Q9ULI1 1742 aa13.58□□□□□ -0.24
MDH1-216ENST00000544381 PARD3Q8TEW0 1356 aa13.57□□□□□ -0.24
MDH1-216ENST00000544381 BLMP54132 1417 aaPredicted RBP13.57□□□□□ -0.24
MDH1-216ENST00000544381 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
MDH1-216ENST00000544381 CCDC184Q52MB2 194 aa13.56□□□□□ -0.24
MDH1-216ENST00000544381 CCDC125Q86Z20 511 aa13.56□□□□□ -0.24
MDH1-216ENST00000544381 SPATA31A3Q5VYP0 1347 aa13.56□□□□□ -0.24
MDH1-216ENST00000544381 NPC1L1Q9UHC9 1359 aa13.55□□□□□ -0.24
MDH1-216ENST00000544381 WASLO00401 505 aaPredicted RBP13.55□□□□□ -0.24
MDH1-216ENST00000544381 AMER1Q5JTC6 1135 aaPredicted RBP13.55□□□□□ -0.24
MDH1-216ENST00000544381 DEFB132Q7Z7B7 95 aa13.55□□□□□ -0.24
MDH1-216ENST00000544381 CARD14Q9BXL6 1004 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms