RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 PLEKHG3A1L390 1219 aa22.58■■□□□ 1.21
SCARB1-208ENST00000544327 IFT57Q9NWB7 429 aa22.58■■□□□ 1.21
SCARB1-208ENST00000544327 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
SCARB1-208ENST00000544327 ZNF853P0CG23 659 aa22.57■■□□□ 1.2
SCARB1-208ENST00000544327 DLG5Q8TDM6 1919 aa22.57■■□□□ 1.2
SCARB1-208ENST00000544327 OVOS2A0A0J9YW53 1432 aa22.57■■□□□ 1.2
SCARB1-208ENST00000544327 LMOD3Q0VAK6 560 aa22.57■■□□□ 1.2
SCARB1-208ENST00000544327 OVOS2Q6IE36 1432 aa22.57■■□□□ 1.2
SCARB1-208ENST00000544327 HMOX1P09601 288 aa22.56■■□□□ 1.2
SCARB1-208ENST00000544327 LTKP29376 864 aa22.55■■□□□ 1.2
SCARB1-208ENST00000544327 DEKP35659 375 aaKnown RBP22.55■■□□□ 1.2
SCARB1-208ENST00000544327 GNAI1P63096 354 aa22.55■■□□□ 1.2
SCARB1-208ENST00000544327 TTC21BQ7Z4L5 1316 aa22.54■■□□□ 1.2
SCARB1-208ENST00000544327 PTPRUQ92729 1446 aa22.54■■□□□ 1.2
SCARB1-208ENST00000544327 ITPRIPQ8IWB1 547 aa22.54■■□□□ 1.2
SCARB1-208ENST00000544327 TMEM57Q8N5G2 664 aa22.54■■□□□ 1.2
SCARB1-208ENST00000544327 ZBTB40Q9NUA8 1239 aa22.54■■□□□ 1.2
SCARB1-208ENST00000544327 PIK3R4Q99570 1358 aa22.54■■□□□ 1.2
SCARB1-208ENST00000544327 PTCH1Q13635 1447 aa22.53■■□□□ 1.2
SCARB1-208ENST00000544327 DIP2AQ14689 1571 aa22.53■■□□□ 1.2
SCARB1-208ENST00000544327 ARHGAP45Q92619 1136 aa22.53■■□□□ 1.2
SCARB1-208ENST00000544327 LAS1LQ9Y4W2 734 aaKnown RBP22.53■■□□□ 1.2
SCARB1-208ENST00000544327 USP6P35125 1406 aa22.53■■□□□ 1.2
SCARB1-208ENST00000544327 VAMP4O75379 141 aa22.52■■□□□ 1.2
SCARB1-208ENST00000544327 DAXXQ9UER7 740 aaPredicted RBP22.52■■□□□ 1.2
SCARB1-208ENST00000544327 USP31Q70CQ4 1352 aa22.52■■□□□ 1.2
SCARB1-208ENST00000544327 SSH2Q76I76 1423 aa22.52■■□□□ 1.19
SCARB1-208ENST00000544327 RRS1Q15050 365 aaKnown RBP22.51■■□□□ 1.19
SCARB1-208ENST00000544327 SMC5Q8IY18 1101 aa22.51■■□□□ 1.19
SCARB1-208ENST00000544327 RGPD1P0DJD0 1748 aa22.5■■□□□ 1.19
SCARB1-208ENST00000544327 ACEP12821 1306 aa22.5■■□□□ 1.19
SCARB1-208ENST00000544327 MRPL50Q8N5N7 158 aaKnown RBP22.5■■□□□ 1.19
SCARB1-208ENST00000544327 RIMS1Q86UR5 1692 aaKnown RBP22.49■■□□□ 1.19
SCARB1-208ENST00000544327 CFAP44Q96MT7 982 aa22.49■■□□□ 1.19
SCARB1-208ENST00000544327 EID1Q9Y6B2 187 aa22.49■■□□□ 1.19
SCARB1-208ENST00000544327 SEC24BO95487 1268 aa22.48■■□□□ 1.19
SCARB1-208ENST00000544327 CHMP4BQ9H444 224 aaKnown RBP22.48■■□□□ 1.19
SCARB1-208ENST00000544327 TBX22Q9Y458 520 aa22.48■■□□□ 1.19
SCARB1-208ENST00000544327 MBIPQ9NS73 344 aa22.47■■□□□ 1.19
SCARB1-208ENST00000544327 PEAK1Q9H792 1746 aa22.47■■□□□ 1.19
SCARB1-208ENST00000544327 FER1L4A9Z1Z3 1794 aa22.47■■□□□ 1.19
SCARB1-208ENST00000544327 THUMPD2Q9BTF0 503 aaKnown RBP22.47■■□□□ 1.19
SCARB1-208ENST00000544327 EIF4A2Q14240 407 aaKnown RBP22.45■■□□□ 1.19
SCARB1-208ENST00000544327 TTC21AQ8NDW8 1320 aa22.45■■□□□ 1.19
SCARB1-208ENST00000544327 XRN1Q8IZH2 1706 aaKnown RBP22.45■■□□□ 1.18
SCARB1-208ENST00000544327 SLC4A3P48751 1232 aa22.44■■□□□ 1.18
SCARB1-208ENST00000544327 ABCC4O15439 1325 aa22.43■■□□□ 1.18
SCARB1-208ENST00000544327 TSPYL6Q8N831 410 aa22.43■■□□□ 1.18
SCARB1-208ENST00000544327 TBC1D32Q96NH3 1257 aa22.43■■□□□ 1.18
SCARB1-208ENST00000544327 UPF2Q9HAU5 1272 aaKnown RBP22.43■■□□□ 1.18
SCARB1-208ENST00000544327 CEBPAP49715 358 aaPredicted RBP22.42■■□□□ 1.18
SCARB1-208ENST00000544327 KIF24Q5T7B8 1368 aa22.41■■□□□ 1.18
SCARB1-208ENST00000544327 TWISTNBQ3B726 338 aaPredicted RBP22.41■■□□□ 1.18
SCARB1-208ENST00000544327 AMOTL2Q9Y2J4 779 aa22.41■■□□□ 1.18
SCARB1-208ENST00000544327 FMN2Q9NZ56 1722 aa22.41■■□□□ 1.18
SCARB1-208ENST00000544327 ZBTB7BO15156 539 aaPredicted RBP22.41■■□□□ 1.18
SCARB1-208ENST00000544327 SLC26A8Q96RN1 970 aa22.41■■□□□ 1.18
SCARB1-208ENST00000544327 NUCB1Q02818 461 aa22.4■■□□□ 1.18
SCARB1-208ENST00000544327 ARHGEF10O15013 1369 aa22.4■■□□□ 1.18
SCARB1-208ENST00000544327 BECN1Q14457 450 aa22.39■■□□□ 1.17
SCARB1-208ENST00000544327 THEMISQ8N1K5 641 aaPredicted RBP22.38■■□□□ 1.17
SCARB1-208ENST00000544327 C8orf58Q8NAV2 365 aa22.38■■□□□ 1.17
SCARB1-208ENST00000544327 ANKARQ7Z5J8 1434 aa22.38■■□□□ 1.17
SCARB1-208ENST00000544327 SULT6B1Q6IMI4 303 aa22.38■■□□□ 1.17
SCARB1-208ENST00000544327 API5Q9BZZ5 524 aaKnown RBP22.38■■□□□ 1.17
SCARB1-208ENST00000544327 USP54Q70EL1 1684 aa22.37■■□□□ 1.17
SCARB1-208ENST00000544327 NFKBIBQ15653 356 aa22.37■■□□□ 1.17
SCARB1-208ENST00000544327 AEBP1Q8IUX7 1158 aa22.37■■□□□ 1.17
SCARB1-208ENST00000544327 FAM83GA6ND36 823 aa22.36■■□□□ 1.17
SCARB1-208ENST00000544327 KIAA0232Q92628 1395 aa22.36■■□□□ 1.17
SCARB1-208ENST00000544327 HAP1P54257 671 aaPredicted RBP22.36■■□□□ 1.17
SCARB1-208ENST00000544327 SBNO1A3KN83 1393 aa22.35■■□□□ 1.17
SCARB1-208ENST00000544327 GCC1Q96CN9 775 aa22.35■■□□□ 1.17
SCARB1-208ENST00000544327 PIK3C2AO00443 1686 aa22.35■■□□□ 1.17
SCARB1-208ENST00000544327 CHL1O00533 1208 aa22.34■■□□□ 1.17
SCARB1-208ENST00000544327 RGPD8O14715 1765 aaPredicted RBP22.34■■□□□ 1.17
SCARB1-208ENST00000544327 FLT4P35916 1363 aa22.33■■□□□ 1.17
SCARB1-208ENST00000544327 HSP90AB2PQ58FF8 381 aa22.33■■□□□ 1.16
SCARB1-208ENST00000544327 DCTN1Q14203 1278 aa22.32■■□□□ 1.16
SCARB1-208ENST00000544327 CHD1LQ86WJ1 897 aa22.32■■□□□ 1.16
SCARB1-208ENST00000544327 MAP3K19Q56UN5 1328 aa22.32■■□□□ 1.16
SCARB1-208ENST00000544327 KDRP35968 1356 aa22.32■■□□□ 1.16
SCARB1-208ENST00000544327 CRB1P82279 1406 aa22.32■■□□□ 1.16
SCARB1-208ENST00000544327 NUTM2FA1L443 756 aa22.31■■□□□ 1.16
SCARB1-208ENST00000544327 ELL2O00472 640 aaPredicted RBP22.3■■□□□ 1.16
SCARB1-208ENST00000544327 MARF1Q9Y4F3 1742 aaKnown RBP22.29■■□□□ 1.16
SCARB1-208ENST00000544327 CEP170BQ9Y4F5 1589 aaPredicted RBP22.29■■□□□ 1.16
SCARB1-208ENST00000544327 RGS12O14924 1447 aa22.28■■□□□ 1.16
SCARB1-208ENST00000544327 INTS3Q68E01 1043 aaKnown RBP22.28■■□□□ 1.16
SCARB1-208ENST00000544327 NGDNQ8NEJ9 315 aaKnown RBP22.27■■□□□ 1.16
SCARB1-208ENST00000544327 BCL11AQ9H165 835 aa22.27■■□□□ 1.16
SCARB1-208ENST00000544327 IGSF1Q8N6C5 1336 aa22.27■■□□□ 1.15
SCARB1-208ENST00000544327 C22orf23Q9BZE7 217 aa22.27■■□□□ 1.15
SCARB1-208ENST00000544327 BMP2KLQ5H9B9 411 aa22.26■■□□□ 1.15
SCARB1-208ENST00000544327 SIRT2Q8IXJ6 389 aa22.26■■□□□ 1.15
SCARB1-208ENST00000544327 LNPKQ9C0E8 428 aa22.26■■□□□ 1.15
SCARB1-208ENST00000544327 LRRC37A3O60309 1634 aa22.25■■□□□ 1.15
SCARB1-208ENST00000544327 PTPRCP08575 1304 aa22.25■■□□□ 1.15
SCARB1-208ENST00000544327 MCM10Q7L590 875 aa22.24■■□□□ 1.15
SCARB1-208ENST00000544327 TBC1D2Q9BYX2 928 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms