RNA–Protein interactions for RNA: ENST00000544079.2

CCT4-204, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

TSL 2 BASIC

Gene CCT4, Length 2,261 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-204ENST00000544079 IFT172Q9UG01 1749 aa22.38■■□□□ 1.17
CCT4-204ENST00000544079 TAF3Q5VWG9 929 aa22.37■■□□□ 1.17
CCT4-204ENST00000544079 ZNF710Q8N1W2 664 aa22.37■■□□□ 1.17
CCT4-204ENST00000544079 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.37■■□□□ 1.178e-8■□□□□ 8.8
CCT4-204ENST00000544079 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.37■■□□□ 1.173e-14■■■□□ 18.2
CCT4-204ENST00000544079 RBM27Q9P2N5 1060 aaKnown RBP22.37■■□□□ 1.17
CCT4-204ENST00000544079 NRXN1Q9ULB1 1477 aa22.37■■□□□ 1.17
CCT4-204ENST00000544079 CD109Q6YHK3 1445 aa22.36■■□□□ 1.17
CCT4-204ENST00000544079 SYCE3A1L190 88 aa22.36■■□□□ 1.17
CCT4-204ENST00000544079 UVSSAQ2YD98 709 aa22.36■■□□□ 1.17
CCT4-204ENST00000544079 PTMAP06454 111 aaKnown RBP22.36■■□□□ 1.17
CCT4-204ENST00000544079 U2AF1L5P0DN76 240 aaPredicted RBP22.36■■□□□ 1.17
CCT4-204ENST00000544079 U2AF1Q01081 240 aaKnown RBP eCLIP22.36■■□□□ 1.172e-10■■□□□ 12
CCT4-204ENST00000544079 PPP4R3BQ5MIZ7 849 aa22.35■■□□□ 1.17
CCT4-204ENST00000544079 TSPY26PQ9H489 355 aa22.34■■□□□ 1.17
CCT4-204ENST00000544079 ST18O60284 1047 aa22.34■■□□□ 1.17
CCT4-204ENST00000544079 TMPOP42166 694 aaKnown RBP22.34■■□□□ 1.17
CCT4-204ENST00000544079 FAM184AQ8NB25 1140 aa22.34■■□□□ 1.17
CCT4-204ENST00000544079 SYAP1Q96A49 352 aaPredicted RBP22.34■■□□□ 1.17
CCT4-204ENST00000544079 PLEKHF1Q96S99 279 aa22.34■■□□□ 1.17
CCT4-204ENST00000544079 TRIM35Q9UPQ4 493 aa22.34■■□□□ 1.17
CCT4-204ENST00000544079 ZDHHC9Q9Y397 364 aa22.33■■□□□ 1.17
CCT4-204ENST00000544079 ZBTB7BO15156 539 aaPredicted RBP22.33■■□□□ 1.16
CCT4-204ENST00000544079 CFAP70Q5T0N1 1121 aa22.33■■□□□ 1.16
CCT4-204ENST00000544079 ARHGAP45Q92619 1136 aa22.33■■□□□ 1.16
CCT4-204ENST00000544079 ARID3AQ99856 593 aa22.33■■□□□ 1.16
CCT4-204ENST00000544079 USP26Q9BXU7 913 aa22.33■■□□□ 1.16
CCT4-204ENST00000544079 SPTLC3Q9NUV7 552 aa22.33■■□□□ 1.16
CCT4-204ENST00000544079 KIF3AQ9Y496 699 aa22.33■■□□□ 1.16
CCT4-204ENST00000544079 UHRF1BP1LA0JNW5 1464 aa22.32■■□□□ 1.16
CCT4-204ENST00000544079 PUS7Q96PZ0 661 aaKnown RBP22.32■■□□□ 1.16
CCT4-204ENST00000544079 PKP1Q13835 747 aa22.32■■□□□ 1.16
CCT4-204ENST00000544079 DNTTIP2Q5QJE6 756 aaKnown RBP22.32■■□□□ 1.16
CCT4-204ENST00000544079 PHF14O94880 888 aa22.31■■□□□ 1.16
CCT4-204ENST00000544079 NOLC1Q14978 699 aaKnown RBP eCLIP22.31■■□□□ 1.161e-7■■■□□ 18.6
CCT4-204ENST00000544079 PTCH1Q13635 1447 aa22.31■■□□□ 1.16
CCT4-204ENST00000544079 KLHL34Q8N239 644 aa22.31■■□□□ 1.16
CCT4-204ENST00000544079 VWDEQ8N2E2 1590 aa22.3■■□□□ 1.16
CCT4-204ENST00000544079 FKBP5Q13451 457 aaPredicted RBP22.29■■□□□ 1.16
CCT4-204ENST00000544079 QRICH2Q9H0J4 1663 aa22.29■■□□□ 1.16
CCT4-204ENST00000544079 INTS3Q68E01 1043 aaKnown RBP22.28■■□□□ 1.16
CCT4-204ENST00000544079 KIF1BO60333 1816 aa22.28■■□□□ 1.16
CCT4-204ENST00000544079 CBX1P83916 185 aa22.28■■□□□ 1.16
CCT4-204ENST00000544079 GSPT1P15170 499 aaKnown RBP22.27■■□□□ 1.16
CCT4-204ENST00000544079 COL3A1P02461 1466 aaPredicted RBP22.27■■□□□ 1.15
CCT4-204ENST00000544079 ATP2B3Q16720 1220 aa22.26■■□□□ 1.15
CCT4-204ENST00000544079 SLC12A5Q9H2X9 1139 aa22.26■■□□□ 1.15
CCT4-204ENST00000544079 TTC22Q5TAA0 569 aa22.25■■□□□ 1.15
CCT4-204ENST00000544079 PLEKHM2Q8IWE5 1019 aa22.25■■□□□ 1.15
CCT4-204ENST00000544079 NSFL1CQ9UNZ2 370 aaKnown RBP22.25■■□□□ 1.15
CCT4-204ENST00000544079 KIF24Q5T7B8 1368 aa22.25■■□□□ 1.15
CCT4-204ENST00000544079 ABCC1P33527 1531 aa22.25■■□□□ 1.15
CCT4-204ENST00000544079 ZGPATQ8N5A5 531 aaKnown RBP22.24■■□□□ 1.15
CCT4-204ENST00000544079 FEZ1Q99689 392 aa22.24■■□□□ 1.15
CCT4-204ENST00000544079 ANKRD36BQ8N2N9 1353 aa22.24■■□□□ 1.15
CCT4-204ENST00000544079 ADGRF5Q8IZF2 1346 aa22.24■■□□□ 1.15
CCT4-204ENST00000544079 PDCL2Q8N4E4 241 aa22.24■■□□□ 1.15
CCT4-204ENST00000544079 RNF214Q8ND24 703 aa22.24■■□□□ 1.15
CCT4-204ENST00000544079 DIAPH3Q9NSV4 1193 aa22.24■■□□□ 1.15
CCT4-204ENST00000544079 ANKRD7Q92527 254 aa22.23■■□□□ 1.15
CCT4-204ENST00000544079 BCL2L12Q9HB09 334 aa22.23■■□□□ 1.15
CCT4-204ENST00000544079 BRD1O95696 1058 aa22.23■■□□□ 1.15
CCT4-204ENST00000544079 MCM2P49736 904 aa22.23■■□□□ 1.15
CCT4-204ENST00000544079 CASC1Q6TDU7 716 aa22.23■■□□□ 1.15
CCT4-204ENST00000544079 SIRT2Q8IXJ6 389 aa22.23■■□□□ 1.15
CCT4-204ENST00000544079 ABCC4O15439 1325 aa22.21■■□□□ 1.15
CCT4-204ENST00000544079 REC8O95072 547 aa22.2■■□□□ 1.14
CCT4-204ENST00000544079 TPM3P06753 285 aa22.2■■□□□ 1.14
CCT4-204ENST00000544079 PLCH2O75038 1416 aa22.19■■□□□ 1.14
CCT4-204ENST00000544079 BBXQ8WY36 941 aaPredicted RBP22.19■■□□□ 1.14
CCT4-204ENST00000544079 GTF2E1P29083 439 aaPredicted RBP22.19■■□□□ 1.14
CCT4-204ENST00000544079 AEBP2Q6ZN18 517 aaPredicted RBP22.19■■□□□ 1.14
CCT4-204ENST00000544079 MRPL50Q8N5N7 158 aaKnown RBP22.19■■□□□ 1.14
CCT4-204ENST00000544079 CTIFO43310 598 aaKnown RBP22.18■■□□□ 1.14
CCT4-204ENST00000544079 SYCP1Q15431 976 aa22.18■■□□□ 1.14
CCT4-204ENST00000544079 DCTPP1Q9H773 170 aa22.18■■□□□ 1.14
CCT4-204ENST00000544079 KIF13AQ9H1H9 1805 aa22.18■■□□□ 1.14
CCT4-204ENST00000544079 CHAF1AQ13111 956 aaPredicted RBP22.18■■□□□ 1.14
CCT4-204ENST00000544079 INTS4Q96HW7 963 aaKnown RBP22.18■■□□□ 1.14
CCT4-204ENST00000544079 CUL4AQ13619 759 aa22.17■■□□□ 1.14
CCT4-204ENST00000544079 TSC1Q92574 1164 aa22.17■■□□□ 1.14
CCT4-204ENST00000544079 ZFYVE16Q7Z3T8 1539 aa22.16■■□□□ 1.14
CCT4-204ENST00000544079 PDE4CQ08493 712 aa22.16■■□□□ 1.14
CCT4-204ENST00000544079 CDC42BPGQ6DT37 1551 aa22.16■■□□□ 1.14
CCT4-204ENST00000544079 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
CCT4-204ENST00000544079 GABPB1Q06547 395 aaPredicted RBP22.15■■□□□ 1.14
CCT4-204ENST00000544079 JARID2Q92833 1246 aaPredicted RBP22.15■■□□□ 1.14
CCT4-204ENST00000544079 OGFRQ9NZT2 677 aa22.15■■□□□ 1.14
CCT4-204ENST00000544079 FANCAO15360 1455 aa22.15■■□□□ 1.14
CCT4-204ENST00000544079 ADGRB1O14514 1584 aa22.15■■□□□ 1.14
CCT4-204ENST00000544079 MROH2AA6NES4 1674 aa22.15■■□□□ 1.14
CCT4-204ENST00000544079 C1orf115Q9H7X2 142 aa22.14■■□□□ 1.13
CCT4-204ENST00000544079 U2SURPO15042 1029 aaKnown RBP22.13■■□□□ 1.13
CCT4-204ENST00000544079 ADCY5O95622 1261 aa22.13■■□□□ 1.13
CCT4-204ENST00000544079 EFCAB2Q5VUJ9 269 aa22.13■■□□□ 1.13
CCT4-204ENST00000544079 TMEM87AQ8NBN3 555 aa22.13■■□□□ 1.13
CCT4-204ENST00000544079 KIAA1524Q8TCG1 905 aa22.13■■□□□ 1.13
CCT4-204ENST00000544079 ADGRB3O60242 1522 aa22.12■■□□□ 1.13
CCT4-204ENST00000544079 TMX3Q96JJ7 454 aa22.12■■□□□ 1.13
CCT4-204ENST00000544079 KNDC1Q76NI1 1749 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms