RNA–Protein interactions for RNA: ENST00000543374.1

MRPL48-212, Transcript of mitochondrial ribosomal protein L48, humanhuman

TSL 3

Gene MRPL48, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL48-212ENST00000543374 ERFEQ4G0M1 354 aa11□□□□□ -0.65
MRPL48-212ENST00000543374 CARD14Q9BXL6 1004 aa11□□□□□ -0.65
MRPL48-212ENST00000543374 GPSM3Q9Y4H4 160 aa11□□□□□ -0.65
MRPL48-212ENST00000543374 DHX9Q08211 1270 aaKnown RBP10.99□□□□□ -0.65
MRPL48-212ENST00000543374 ZBTB33Q86T24 672 aa10.99□□□□□ -0.65
MRPL48-212ENST00000543374 ZSCAN1Q8NBB4 408 aa10.99□□□□□ -0.65
MRPL48-212ENST00000543374 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.99□□□□□ -0.65
MRPL48-212ENST00000543374 PTK2Q05397 1052 aa10.98□□□□□ -0.65
MRPL48-212ENST00000543374 SLC10A4Q96EP9 437 aa10.98□□□□□ -0.65
MRPL48-212ENST00000543374 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
MRPL48-212ENST00000543374 LRRN4Q8WUT4 740 aa10.96□□□□□ -0.65
MRPL48-212ENST00000543374 FAM117AQ9C073 453 aa10.96□□□□□ -0.65
MRPL48-212ENST00000543374 SOS2Q07890 1332 aaPredicted RBP10.95□□□□□ -0.66
MRPL48-212ENST00000543374 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
MRPL48-212ENST00000543374 PROCA1Q8NCQ7 364 aaPredicted RBP10.95□□□□□ -0.66
MRPL48-212ENST00000543374 KCTD15Q96SI1 283 aaPredicted RBP10.95□□□□□ -0.66
MRPL48-212ENST00000543374 SOBPA7XYQ1 873 aa10.94□□□□□ -0.66
MRPL48-212ENST00000543374 NR6A1Q15406 480 aa10.94□□□□□ -0.66
MRPL48-212ENST00000543374 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.94□□□□□ -0.66
MRPL48-212ENST00000543374 PPP1R26Q5T8A7 1209 aaPredicted RBP10.94□□□□□ -0.66
MRPL48-212ENST00000543374 TRIM52Q96A61 297 aa10.94□□□□□ -0.66
MRPL48-212ENST00000543374 GPBP1L1Q9HC44 474 aaPredicted RBP10.94□□□□□ -0.66
MRPL48-212ENST00000543374 AP1G2O75843 785 aa10.93□□□□□ -0.66
MRPL48-212ENST00000543374 Q6ZVU0 165 aa10.93□□□□□ -0.66
MRPL48-212ENST00000543374 TTLL8A6PVC2 850 aa10.91□□□□□ -0.66
MRPL48-212ENST00000543374 PPFIA3O75145 1194 aa10.91□□□□□ -0.66
MRPL48-212ENST00000543374 NBPF20Q3BBV1 942 aa10.91□□□□□ -0.66
MRPL48-212ENST00000543374 GOPCQ9HD26 462 aa10.9□□□□□ -0.66
MRPL48-212ENST00000543374 DNMT3LQ9UJW3 386 aa10.89□□□□□ -0.67
MRPL48-212ENST00000543374 SPINT1O43278 529 aa10.88□□□□□ -0.67
MRPL48-212ENST00000543374 LORP23490 312 aaPredicted RBP10.87□□□□□ -0.67
MRPL48-212ENST00000543374 ADAM32Q8TC27 787 aa10.87□□□□□ -0.67
MRPL48-212ENST00000543374 TMEM259Q4ZIN3 620 aa10.86□□□□□ -0.67
MRPL48-212ENST00000543374 CBLBQ13191 982 aa10.85□□□□□ -0.67
MRPL48-212ENST00000543374 INTS6LQ5JSJ4 861 aaKnown RBP10.85□□□□□ -0.67
MRPL48-212ENST00000543374 FBXO31Q5XUX0 539 aaPredicted RBP10.85□□□□□ -0.67
MRPL48-212ENST00000543374 USP17L8P0C7I0 530 aa10.84□□□□□ -0.67
MRPL48-212ENST00000543374 DZIP3Q86Y13 1208 aaKnown RBP10.84□□□□□ -0.67
MRPL48-212ENST00000543374 PCMTD1Q96MG8 357 aaPredicted RBP10.84□□□□□ -0.67
MRPL48-212ENST00000543374 RFC5P40937 340 aa10.83□□□□□ -0.68
MRPL48-212ENST00000543374 PTSQ03393 145 aa10.83□□□□□ -0.68
MRPL48-212ENST00000543374 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
MRPL48-212ENST00000543374 FIGNL2A6NMB9 653 aa10.81□□□□□ -0.68
MRPL48-212ENST00000543374 CCDC125Q86Z20 511 aa10.81□□□□□ -0.68
MRPL48-212ENST00000543374 SEPT12Q8IYM1 358 aa10.81□□□□□ -0.68
MRPL48-212ENST00000543374 NANOS1Q8WY41 292 aaKnown RBP10.8□□□□□ -0.68
MRPL48-212ENST00000543374 EPS8L1Q8TE68 723 aa10.79□□□□□ -0.68
MRPL48-212ENST00000543374 RELBQ01201 579 aa10.78□□□□□ -0.68
MRPL48-212ENST00000543374 CCDC155Q8N6L0 562 aa10.78□□□□□ -0.68
MRPL48-212ENST00000543374 HMX1Q9NP08 348 aaPredicted RBP10.78□□□□□ -0.68
MRPL48-212ENST00000543374 ZNF592Q92610 1267 aa10.77□□□□□ -0.69
MRPL48-212ENST00000543374 POLMQ9NP87 494 aaPredicted RBP10.77□□□□□ -0.69
MRPL48-212ENST00000543374 ESPNB1AK53 854 aa10.76□□□□□ -0.69
MRPL48-212ENST00000543374 ZNF784Q8NCA9 323 aaPredicted RBP10.76□□□□□ -0.69
MRPL48-212ENST00000543374 AGBL1Q96MI9 1066 aa10.76□□□□□ -0.69
MRPL48-212ENST00000543374 SLC35F4A4IF30 521 aa10.75□□□□□ -0.69
MRPL48-212ENST00000543374 ERVH48-1M5A8F1 160 aa10.75□□□□□ -0.69
MRPL48-212ENST00000543374 ADH1AP07327 375 aa10.75□□□□□ -0.69
MRPL48-212ENST00000543374 CTSOP43234 321 aaPredicted RBP10.75□□□□□ -0.69
MRPL48-212ENST00000543374 MCCD1P59942 119 aaPredicted RBP10.75□□□□□ -0.69
MRPL48-212ENST00000543374 INSM2Q96T92 566 aaPredicted RBP10.75□□□□□ -0.69
MRPL48-212ENST00000543374 TMPRSS4Q9NRS4 437 aa10.74□□□□□ -0.69
MRPL48-212ENST00000543374 ZBBXA8MT70 800 aa10.73□□□□□ -0.69
MRPL48-212ENST00000543374 PTGIRP43119 386 aa10.73□□□□□ -0.69
MRPL48-212ENST00000543374 RAB15P59190 212 aa10.73□□□□□ -0.69
MRPL48-212ENST00000543374 ZNF395Q9H8N7 513 aaPredicted RBP10.73□□□□□ -0.69
MRPL48-212ENST00000543374 SLC24A1O60721 1099 aa10.72□□□□□ -0.69
MRPL48-212ENST00000543374 LILRA1O75019 489 aa10.72□□□□□ -0.69
MRPL48-212ENST00000543374 ITGA6P23229 1130 aa10.72□□□□□ -0.69
MRPL48-212ENST00000543374 NEUROD2Q15784 382 aa10.72□□□□□ -0.69
MRPL48-212ENST00000543374 SV2AQ7L0J3 742 aa10.72□□□□□ -0.69
MRPL48-212ENST00000543374 RNF217Q8TC41 542 aa10.72□□□□□ -0.69
MRPL48-212ENST00000543374 TRIM34Q9BYJ4 488 aa10.72□□□□□ -0.69
MRPL48-212ENST00000543374 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
MRPL48-212ENST00000543374 GPR161Q8N6U8 529 aaKnown RBP10.71□□□□□ -0.69
MRPL48-212ENST00000543374 CNTNAP3BQ96NU0 1288 aa10.7□□□□□ -0.7
MRPL48-212ENST00000543374 COL25A1Q9BXS0 654 aaPredicted RBP10.7□□□□□ -0.7
MRPL48-212ENST00000543374 CNTNAP3Q9BZ76 1288 aa10.7□□□□□ -0.7
MRPL48-212ENST00000543374 ZNF330Q9Y3S2 320 aaPredicted RBP10.7□□□□□ -0.7
MRPL48-212ENST00000543374 ADD1P35611 737 aaKnown RBP10.69□□□□□ -0.7
MRPL48-212ENST00000543374 IL27Q8NEV9 243 aa10.69□□□□□ -0.7
MRPL48-212ENST00000543374 APBB1O00213 710 aa10.68□□□□□ -0.7
MRPL48-212ENST00000543374 SOCS7O14512 581 aa10.68□□□□□ -0.7
MRPL48-212ENST00000543374 LYSMD3Q7Z3D4 306 aa10.68□□□□□ -0.7
MRPL48-212ENST00000543374 VWA5B2Q8N398 1253 aa10.68□□□□□ -0.7
MRPL48-212ENST00000543374 BANK1Q8NDB2 785 aa10.68□□□□□ -0.7
MRPL48-212ENST00000543374 PCDHB9Q9Y5E1 797 aa10.68□□□□□ -0.7
MRPL48-212ENST00000543374 RNF144AP50876 292 aaPredicted RBP10.67□□□□□ -0.7
MRPL48-212ENST00000543374 CDC14CA4D256 554 aa10.66□□□□□ -0.7
MRPL48-212ENST00000543374 ATP5J2-PTCD1G3V325 749 aa10.66□□□□□ -0.7
MRPL48-212ENST00000543374 RNF225M0QZC1 329 aaPredicted RBP10.66□□□□□ -0.7
MRPL48-212ENST00000543374 KRT76Q01546 638 aa10.66□□□□□ -0.7
MRPL48-212ENST00000543374 KCNMA1Q12791 1236 aa10.66□□□□□ -0.7
MRPL48-212ENST00000543374 GPC1P35052 558 aa10.65□□□□□ -0.7
MRPL48-212ENST00000543374 KDF1Q8NAX2 398 aaPredicted RBP10.65□□□□□ -0.7
MRPL48-212ENST00000543374 GMCL1Q96IK5 515 aa10.65□□□□□ -0.7
MRPL48-212ENST00000543374 GJD4Q96KN9 370 aaPredicted RBP10.65□□□□□ -0.7
MRPL48-212ENST00000543374 CYLDQ9NQC7 956 aa10.65□□□□□ -0.7
MRPL48-212ENST00000543374 GIGYF1O75420 1035 aaPredicted RBP10.64□□□□□ -0.71
MRPL48-212ENST00000543374 FBXO45P0C2W1 286 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms