RNA–Protein interactions for RNA: ENST00000543323.5

MDM2-230, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-230ENST00000543323 EVA1BQ9NVM1 165 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 PCDHB3Q9Y5E6 796 aa9.32□□□□□ -0.92
MDM2-230ENST00000543323 DXOO77932 396 aaKnown RBP9.31□□□□□ -0.92
MDM2-230ENST00000543323 PPP4CP60510 307 aa9.31□□□□□ -0.92
MDM2-230ENST00000543323 KCNH2Q12809 1159 aa9.31□□□□□ -0.92
MDM2-230ENST00000543323 EML3Q32P44 896 aa9.31□□□□□ -0.92
MDM2-230ENST00000543323 DNAJC14Q6Y2X3 702 aaPredicted RBP9.31□□□□□ -0.92
MDM2-230ENST00000543323 OGFOD1Q8N543 542 aa9.31□□□□□ -0.92
MDM2-230ENST00000543323 HRO43593 1189 aa9.3□□□□□ -0.92
MDM2-230ENST00000543323 DPYDQ12882 1025 aa9.3□□□□□ -0.92
MDM2-230ENST00000543323 TRAF7Q6Q0C0 670 aa9.3□□□□□ -0.92
MDM2-230ENST00000543323 TRIM50Q86XT4 487 aa9.3□□□□□ -0.92
MDM2-230ENST00000543323 ANKK1Q8NFD2 765 aa9.3□□□□□ -0.92
MDM2-230ENST00000543323 NUDT12Q9BQG2 462 aa9.3□□□□□ -0.92
MDM2-230ENST00000543323 HPS5Q9UPZ3 1129 aa9.3□□□□□ -0.92
MDM2-230ENST00000543323 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
MDM2-230ENST00000543323 SOWAHBA6NEL2 793 aa9.28□□□□□ -0.92
MDM2-230ENST00000543323 SERPINB4P48594 390 aa9.28□□□□□ -0.92
MDM2-230ENST00000543323 ATP1A2P50993 1020 aa9.28□□□□□ -0.92
MDM2-230ENST00000543323 CLDN10P78369 228 aa9.28□□□□□ -0.92
MDM2-230ENST00000543323 C1orf216Q8TAB5 229 aa9.28□□□□□ -0.92
MDM2-230ENST00000543323 DNAAF2Q9NVR5 837 aaKnown RBP9.28□□□□□ -0.92
MDM2-230ENST00000543323 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
MDM2-230ENST00000543323 LOC105371045A0A1W2PR82 267 aa9.27□□□□□ -0.93
MDM2-230ENST00000543323 MMP16P51512 607 aa9.27□□□□□ -0.93
MDM2-230ENST00000543323 ZNF594Q96JF6 807 aaPredicted RBP9.27□□□□□ -0.93
MDM2-230ENST00000543323 ARHGAP9Q9BRR9 750 aa9.27□□□□□ -0.93
MDM2-230ENST00000543323 TSR3Q9UJK0 312 aaKnown RBP9.27□□□□□ -0.93
MDM2-230ENST00000543323 LARGE2Q8N3Y3 721 aa9.26□□□□□ -0.93
MDM2-230ENST00000543323 FAM160A2Q8N612 972 aaPredicted RBP9.26□□□□□ -0.93
MDM2-230ENST00000543323 GOLGA8CPA6NN73 597 aa9.25□□□□□ -0.93
MDM2-230ENST00000543323 NOM1Q5C9Z4 860 aaKnown RBP9.25□□□□□ -0.93
MDM2-230ENST00000543323 ZBTB33Q86T24 672 aa9.25□□□□□ -0.93
MDM2-230ENST00000543323 SIX5Q8N196 739 aa9.25□□□□□ -0.93
MDM2-230ENST00000543323 DKK1O94907 266 aa9.24□□□□□ -0.93
MDM2-230ENST00000543323 BCAMP50895 628 aa9.24□□□□□ -0.93
MDM2-230ENST00000543323 MARSP56192 900 aaKnown RBP9.24□□□□□ -0.93
MDM2-230ENST00000543323 TSGA10IPQ3SY00 556 aa9.24□□□□□ -0.93
MDM2-230ENST00000543323 SH3BP5LQ7L8J4 393 aa9.24□□□□□ -0.93
MDM2-230ENST00000543323 SPSB2Q99619 263 aa9.24□□□□□ -0.93
MDM2-230ENST00000543323 IGSF5Q9NSI5 407 aa9.24□□□□□ -0.93
MDM2-230ENST00000543323 DOLKQ9UPQ8 538 aa9.24□□□□□ -0.93
MDM2-230ENST00000543323 DZIP3Q86Y13 1208 aaKnown RBP9.23□□□□□ -0.93
MDM2-230ENST00000543323 SIRT1Q96EB6 747 aa9.23□□□□□ -0.93
MDM2-230ENST00000543323 CCDC85AQ96PX6 553 aaPredicted RBP9.23□□□□□ -0.93
MDM2-230ENST00000543323 BIN2Q9UBW5 565 aaPredicted RBP9.23□□□□□ -0.93
MDM2-230ENST00000543323 ZBTB7BO15156 539 aaPredicted RBP9.22□□□□□ -0.93
MDM2-230ENST00000543323 SCNN1AP37088 669 aa9.22□□□□□ -0.93
MDM2-230ENST00000543323 MRRFQ96E11 262 aaKnown RBP9.22□□□□□ -0.93
MDM2-230ENST00000543323 PRDM9Q9NQV7 894 aa9.22□□□□□ -0.93
MDM2-230ENST00000543323 KIAA1024Q9UPX6 916 aa9.22□□□□□ -0.93
MDM2-230ENST00000543323 ZNF16P17020 682 aaPredicted RBP9.21□□□□□ -0.94
MDM2-230ENST00000543323 SEC13P55735 322 aa9.21□□□□□ -0.94
MDM2-230ENST00000543323 GTF2IP78347 998 aa9.21□□□□□ -0.94
MDM2-230ENST00000543323 STAC3Q96MF2 364 aa9.21□□□□□ -0.94
MDM2-230ENST00000543323 BCL2L13Q9BXK5 485 aa9.21□□□□□ -0.94
MDM2-230ENST00000543323 UNC93B1Q9H1C4 597 aa9.21□□□□□ -0.94
MDM2-230ENST00000543323 CXXC1Q9P0U4 656 aaPredicted RBP9.21□□□□□ -0.94
MDM2-230ENST00000543323 KIAA1522Q9P206 1035 aaPredicted RBP9.21□□□□□ -0.94
MDM2-230ENST00000543323 EGFL7Q9UHF1 273 aa9.21□□□□□ -0.94
MDM2-230ENST00000543323 SHROOM4Q9ULL8 1493 aa9.21□□□□□ -0.94
MDM2-230ENST00000543323 PRMT3O60678 531 aa9.2□□□□□ -0.94
MDM2-230ENST00000543323 OCLNQ16625 522 aa9.2□□□□□ -0.94
MDM2-230ENST00000543323 OXLD1Q5BKU9 147 aa9.2□□□□□ -0.94
MDM2-230ENST00000543323 TAS1R3Q7RTX0 852 aa9.2□□□□□ -0.94
MDM2-230ENST00000543323 RBM19Q9Y4C8 960 aaKnown RBP9.2□□□□□ -0.94
MDM2-230ENST00000543323 ANKRD13DQ6ZTN6 518 aa9.19□□□□□ -0.94
MDM2-230ENST00000543323 KRTAP3-3Q9BYR6 98 aa9.19□□□□□ -0.94
MDM2-230ENST00000543323 KRTAP3-2Q9BYR7 98 aa9.19□□□□□ -0.94
MDM2-230ENST00000543323 CCDC102BQ68D86 513 aa9.18□□□□□ -0.94
MDM2-230ENST00000543323 SH3RF1Q7Z6J0 888 aa9.18□□□□□ -0.94
MDM2-230ENST00000543323 NPAS4Q8IUM7 802 aa9.18□□□□□ -0.94
MDM2-230ENST00000543323 WNT2BQ93097 391 aa9.18□□□□□ -0.94
MDM2-230ENST00000543323 PRIMPOLQ96LW4 560 aa9.18□□□□□ -0.94
MDM2-230ENST00000543323 CARD14Q9BXL6 1004 aa9.18□□□□□ -0.94
MDM2-230ENST00000543323 ANKRD33BA6NCL7 494 aa9.17□□□□□ -0.94
MDM2-230ENST00000543323 GIGYF1O75420 1035 aaPredicted RBP9.17□□□□□ -0.94
MDM2-230ENST00000543323 ABL1P00519 1130 aa9.17□□□□□ -0.94
MDM2-230ENST00000543323 RNF20Q5VTR2 975 aa9.17□□□□□ -0.94
MDM2-230ENST00000543323 PTCRAQ6ISU1 281 aaPredicted RBP9.17□□□□□ -0.94
MDM2-230ENST00000543323 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
MDM2-230ENST00000543323 GIPC2Q8TF65 315 aa9.17□□□□□ -0.94
MDM2-230ENST00000543323 MAGEB6P1A0A0J9YX57 407 aa9.16□□□□□ -0.94
MDM2-230ENST00000543323 SFI1A8K8P3 1242 aa9.16□□□□□ -0.94
MDM2-230ENST00000543323 ADH1BP00325 375 aa9.16□□□□□ -0.94
MDM2-230ENST00000543323 COPS2P61201 443 aa9.16□□□□□ -0.94
MDM2-230ENST00000543323 CCDC24Q8N4L8 307 aa9.16□□□□□ -0.94
MDM2-230ENST00000543323 WBP1LQ9NX94 342 aa9.16□□□□□ -0.94
MDM2-230ENST00000543323 PCDHGA11Q9Y5H2 935 aa9.16□□□□□ -0.94
MDM2-230ENST00000543323 H3BRB1 525 aa9.15□□□□□ -0.94
MDM2-230ENST00000543323 ICMTO60725 284 aa9.15□□□□□ -0.94
MDM2-230ENST00000543323 PSME1Q06323 249 aa9.15□□□□□ -0.94
MDM2-230ENST00000543323 ZNF211Q13398 564 aaPredicted RBP9.15□□□□□ -0.94
MDM2-230ENST00000543323 ERFEQ4G0M1 354 aa9.15□□□□□ -0.94
MDM2-230ENST00000543323 TUT1Q9H6E5 874 aaKnown RBP9.15□□□□□ -0.94
MDM2-230ENST00000543323 BPHLQ86WA6 291 aaPredicted RBP9.14□□□□□ -0.95
MDM2-230ENST00000543323 GLYCTKQ8IVS8 523 aa9.14□□□□□ -0.95
MDM2-230ENST00000543323 TLL1O43897 1013 aa9.13□□□□□ -0.95
MDM2-230ENST00000543323 USP4Q13107 963 aa9.13□□□□□ -0.95
MDM2-230ENST00000543323 ZNF326Q5BKZ1 582 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms