RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 U2AF1Q01081 240 aaKnown RBP eCLIP14.22□□□□□ -0.133e-7■□□□□ 8
DDB1-221ENST00000543162 IP6K1Q92551 441 aa14.22□□□□□ -0.13
DDB1-221ENST00000543162 ABCA3Q99758 1704 aa14.21□□□□□ -0.13
DDB1-221ENST00000543162 IL13P35225 146 aa14.21□□□□□ -0.13
DDB1-221ENST00000543162 COL22A1Q8NFW1 1626 aaPredicted RBP14.2□□□□□ -0.14
DDB1-221ENST00000543162 EIF4A2Q14240 407 aaKnown RBP14.2□□□□□ -0.14
DDB1-221ENST00000543162 CPDO75976 1380 aa14.2□□□□□ -0.14
DDB1-221ENST00000543162 HNRNPUQ00839 825 aaKnown RBP eCLIP14.19□□□□□ -0.14
DDB1-221ENST00000543162 KIAA0232Q92628 1395 aa14.19□□□□□ -0.14
DDB1-221ENST00000543162 BLMP54132 1417 aaPredicted RBP14.18□□□□□ -0.14
DDB1-221ENST00000543162 LTV1Q96GA3 475 aaPredicted RBP14.18□□□□□ -0.14
DDB1-221ENST00000543162 PRDM11Q9NQV5 511 aa14.18□□□□□ -0.14
DDB1-221ENST00000543162 ABCC6O95255 1503 aa14.17□□□□□ -0.14
DDB1-221ENST00000543162 CHRNA2Q15822 529 aa14.17□□□□□ -0.14
DDB1-221ENST00000543162 CCDC146Q8IYE0 955 aa14.16□□□□□ -0.14
DDB1-221ENST00000543162 PNNQ9H307 717 aaKnown RBP14.16□□□□□ -0.14
DDB1-221ENST00000543162 JCADQ9P266 1359 aa14.16□□□□□ -0.14
DDB1-221ENST00000543162 COL18A1P39060 1754 aa14.15□□□□□ -0.14
DDB1-221ENST00000543162 FCHSD2O94868 740 aa14.15□□□□□ -0.14
DDB1-221ENST00000543162 HSPA1LP34931 641 aa14.15□□□□□ -0.14
DDB1-221ENST00000543162 AXIN2Q9Y2T1 843 aa14.15□□□□□ -0.14
DDB1-221ENST00000543162 HMOX1P09601 288 aa14.14□□□□□ -0.15
DDB1-221ENST00000543162 ANKRD24Q8TF21 1146 aa14.14□□□□□ -0.15
DDB1-221ENST00000543162 RUNDC1Q96C34 613 aa14.14□□□□□ -0.15
DDB1-221ENST00000543162 EYA1Q99502 592 aa14.14□□□□□ -0.15
DDB1-221ENST00000543162 RGPD1P0DJD0 1748 aa14.14□□□□□ -0.15
DDB1-221ENST00000543162 RGPD5Q99666 1765 aa14.14□□□□□ -0.15
DDB1-221ENST00000543162 NUTM2BA6NNL0 878 aaPredicted RBP14.13□□□□□ -0.15
DDB1-221ENST00000543162 NUTM2EB1AL46 878 aaPredicted RBP14.13□□□□□ -0.15
DDB1-221ENST00000543162 SULT6B1Q6IMI4 303 aa14.13□□□□□ -0.15
DDB1-221ENST00000543162 NUTM2AQ8IVF1 878 aaPredicted RBP14.13□□□□□ -0.15
DDB1-221ENST00000543162 RSPH6AQ9H0K4 717 aa14.13□□□□□ -0.15
DDB1-221ENST00000543162 IGSF1Q8N6C5 1336 aa14.13□□□□□ -0.15
DDB1-221ENST00000543162 MAPK8IP3Q9UPT6 1336 aa14.13□□□□□ -0.15
DDB1-221ENST00000543162 FAM83GA6ND36 823 aa14.12□□□□□ -0.15
DDB1-221ENST00000543162 NEFMP07197 916 aa14.12□□□□□ -0.15
DDB1-221ENST00000543162 PRKAR2BP31323 418 aa14.12□□□□□ -0.15
DDB1-221ENST00000543162 ERBB3P21860 1342 aa14.12□□□□□ -0.15
DDB1-221ENST00000543162 LMO7Q8WWI1 1683 aa14.11□□□□□ -0.15
DDB1-221ENST00000543162 SENP3-EIF4A1A0A087X0R7 540 aa14.11□□□□□ -0.15
DDB1-221ENST00000543162 APAF1O14727 1248 aa14.11□□□□□ -0.15
DDB1-221ENST00000543162 ADAMTS2O95450 1211 aa14.11□□□□□ -0.15
DDB1-221ENST00000543162 CSB-PGBD3P0DP91 1061 aa14.11□□□□□ -0.15
DDB1-221ENST00000543162 AEBP1Q8IUX7 1158 aa14.11□□□□□ -0.15
DDB1-221ENST00000543162 PLEKHF1Q96S99 279 aa14.11□□□□□ -0.15
DDB1-221ENST00000543162 CAMTA1Q9Y6Y1 1673 aa14.1□□□□□ -0.15
DDB1-221ENST00000543162 COL14A1Q05707 1796 aaKnown RBP14.1□□□□□ -0.15
DDB1-221ENST00000543162 NBPF6Q5VWK0 638 aa14.1□□□□□ -0.15
DDB1-221ENST00000543162 NBPF4Q96M43 638 aa14.1□□□□□ -0.15
DDB1-221ENST00000543162 SPATA31A6Q5VVP1 1343 aa14.1□□□□□ -0.15
DDB1-221ENST00000543162 ZBED9Q6R2W3 1325 aa14.1□□□□□ -0.15
DDB1-221ENST00000543162 KDRP35968 1356 aa14.09□□□□□ -0.15
DDB1-221ENST00000543162 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
DDB1-221ENST00000543162 NLRP2Q9NX02 1062 aa14.09□□□□□ -0.15
DDB1-221ENST00000543162 SALL2Q9Y467 1007 aaPredicted RBP14.09□□□□□ -0.15
DDB1-221ENST00000543162 FAM208AQ9UK61 1670 aaKnown RBP14.09□□□□□ -0.15
DDB1-221ENST00000543162 RGPD2P0DJD1 1756 aa14.09□□□□□ -0.15
DDB1-221ENST00000543162 COL5A2P05997 1499 aaPredicted RBP14.08□□□□□ -0.16
DDB1-221ENST00000543162 EVA1CP58658 441 aa14.08□□□□□ -0.16
DDB1-221ENST00000543162 NGEFQ8N5V2 710 aa14.08□□□□□ -0.16
DDB1-221ENST00000543162 USHBP1Q8N6Y0 703 aa14.08□□□□□ -0.16
DDB1-221ENST00000543162 BTG4Q9NY30 223 aa14.07□□□□□ -0.16
DDB1-221ENST00000543162 WDR17Q8IZU2 1322 aa14.07□□□□□ -0.16
DDB1-221ENST00000543162 CENPBP07199 599 aaPredicted RBP14.06□□□□□ -0.16
DDB1-221ENST00000543162 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
DDB1-221ENST00000543162 PHACTR3Q96KR7 559 aa14.06□□□□□ -0.16
DDB1-221ENST00000543162 STRN4Q9NRL3 753 aa14.06□□□□□ -0.16
DDB1-221ENST00000543162 RRP7AQ9Y3A4 280 aaKnown RBP14.06□□□□□ -0.16
DDB1-221ENST00000543162 NCAPD2Q15021 1401 aa14.06□□□□□ -0.16
DDB1-221ENST00000543162 TMPOP42166 694 aaKnown RBP14.05□□□□□ -0.16
DDB1-221ENST00000543162 TOM1L2Q6ZVM7 507 aa14.05□□□□□ -0.16
DDB1-221ENST00000543162 PLCH1Q4KWH8 1693 aa14.04□□□□□ -0.16
DDB1-221ENST00000543162 NFE2L2Q16236 605 aa14.04□□□□□ -0.16
DDB1-221ENST00000543162 NCBP3Q53F19 620 aaKnown RBP14.04□□□□□ -0.16
DDB1-221ENST00000543162 RIPK4P57078 832 aa14.03□□□□□ -0.16
DDB1-221ENST00000543162 LARP1Q6PKG0 1096 aaKnown RBP14.03□□□□□ -0.16
DDB1-221ENST00000543162 CARD10Q9BWT7 1032 aa14.03□□□□□ -0.16
DDB1-221ENST00000543162 LRP6O75581 1613 aa14.03□□□□□ -0.16
DDB1-221ENST00000543162 CRB1P82279 1406 aa14.02□□□□□ -0.16
DDB1-221ENST00000543162 CCDC27Q2M243 656 aa14.02□□□□□ -0.17
DDB1-221ENST00000543162 MEX3CQ5U5Q3 659 aaKnown RBP14.02□□□□□ -0.17
DDB1-221ENST00000543162 FBXO41Q8TF61 875 aa14.02□□□□□ -0.17
DDB1-221ENST00000543162 RAPGEF4Q8WZA2 1011 aa14.02□□□□□ -0.17
DDB1-221ENST00000543162 NGLY1Q96IV0 654 aa14.02□□□□□ -0.17
DDB1-221ENST00000543162 C8orf37Q96NL8 207 aa14.02□□□□□ -0.17
DDB1-221ENST00000543162 NWD2Q9ULI1 1742 aa14.01□□□□□ -0.17
DDB1-221ENST00000543162 PDE3BQ13370 1112 aa14.01□□□□□ -0.17
DDB1-221ENST00000543162 WWC1Q8IX03 1113 aa14.01□□□□□ -0.17
DDB1-221ENST00000543162 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
DDB1-221ENST00000543162 SLIT2O94813 1529 aa14□□□□□ -0.17
DDB1-221ENST00000543162 ZNF521Q96K83 1311 aa14□□□□□ -0.17
DDB1-221ENST00000543162 TATP17735 454 aaPredicted RBP14□□□□□ -0.17
DDB1-221ENST00000543162 LMOD3Q0VAK6 560 aa14□□□□□ -0.17
DDB1-221ENST00000543162 MTHFSDQ2M296 383 aaKnown RBP14□□□□□ -0.17
DDB1-221ENST00000543162 AMOTQ4VCS5 1084 aa14□□□□□ -0.17
DDB1-221ENST00000543162 PLEKHO1Q53GL0 409 aaPredicted RBP14□□□□□ -0.17
DDB1-221ENST00000543162 PHF23Q9BUL5 403 aaPredicted RBP14□□□□□ -0.17
DDB1-221ENST00000543162 NRAPQ86VF7 1730 aa14□□□□□ -0.17
DDB1-221ENST00000543162 TRIM35Q9UPQ4 493 aa13.99□□□□□ -0.17
DDB1-221ENST00000543162 PLEKHG2Q9H7P9 1386 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms