RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 RRAGCQ9HB90 399 aa5.12□□□□□ -1.59
CHD4-209ENST00000542717 PNPLA7Q6ZV29 1317 aa5.12□□□□□ -1.59
CHD4-209ENST00000542717 KDM2BQ8NHM5 1336 aa5.12□□□□□ -1.59
CHD4-209ENST00000542717 PDE4DIPQ5VU43 2346 aa5.12□□□□□ -1.59
CHD4-209ENST00000542717 FMN2Q9NZ56 1722 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 DLL1O00548 723 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 NUTM2GQ5VZR2 741 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 ARHGAP27Q6ZUM4 889 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 TOM1L2Q6ZVM7 507 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 NGDNQ8NEJ9 315 aaKnown RBP5.11□□□□□ -1.59
CHD4-209ENST00000542717 PLEKHH1Q9ULM0 1364 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 DAPK1P53355 1430 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 ANKRD50Q9ULJ7 1429 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 E9PCH4 1651 aa5.11□□□□□ -1.59
CHD4-209ENST00000542717 PARP4Q9UKK3 1724 aaKnown RBP5.11□□□□□ -1.59
CHD4-209ENST00000542717 RGPD8O14715 1765 aaPredicted RBP5.1□□□□□ -1.59
CHD4-209ENST00000542717 PRPF38BQ5VTL8 546 aaKnown RBP5.1□□□□□ -1.59
CHD4-209ENST00000542717 AKT1S1Q96B36 256 aa5.1□□□□□ -1.59
CHD4-209ENST00000542717 PEAK1Q9H792 1746 aa5.1□□□□□ -1.59
CHD4-209ENST00000542717 BRD4O60885 1362 aaPredicted RBP5.09□□□□□ -1.59
CHD4-209ENST00000542717 ANKRD30BQ9BXX2 1392 aa5.09□□□□□ -1.59
CHD4-209ENST00000542717 ACIN1Q9UKV3 1341 aaKnown RBP5.09□□□□□ -1.59
CHD4-209ENST00000542717 EXOC5O00471 708 aa5.09□□□□□ -1.59
CHD4-209ENST00000542717 SAFB2Q14151 953 aaKnown RBP eCLIP5.09□□□□□ -1.59
CHD4-209ENST00000542717 C9orf131Q5VYM1 1079 aa5.09□□□□□ -1.59
CHD4-209ENST00000542717 LRRC4BQ9NT99 713 aa5.09□□□□□ -1.59
CHD4-209ENST00000542717 BCS1LQ9Y276 419 aa5.09□□□□□ -1.59
CHD4-209ENST00000542717 KAT6BQ8WYB5 2073 aa5.09□□□□□ -1.59
CHD4-209ENST00000542717 KCPQ6ZWJ8 1503 aa5.08□□□□□ -1.6
CHD4-209ENST00000542717 CRB1P82279 1406 aa5.08□□□□□ -1.6
CHD4-209ENST00000542717 CDCA7Q9BWT1 371 aaPredicted RBP5.08□□□□□ -1.6
CHD4-209ENST00000542717 LRRC37A3O60309 1634 aa5.08□□□□□ -1.6
CHD4-209ENST00000542717 CLTCL1P53675 1640 aa5.08□□□□□ -1.6
CHD4-209ENST00000542717 NUP155O75694 1391 aa5.07□□□□□ -1.6
CHD4-209ENST00000542717 PLEKHG2Q9H7P9 1386 aa5.07□□□□□ -1.6
CHD4-209ENST00000542717 HSPA8P11142 646 aaKnown RBP5.07□□□□□ -1.6
CHD4-209ENST00000542717 KCNQ4P56696 695 aa5.07□□□□□ -1.6
CHD4-209ENST00000542717 SLC27A3Q5K4L6 730 aa5.07□□□□□ -1.6
CHD4-209ENST00000542717 TMEM132EQ6IEE7 984 aa5.07□□□□□ -1.6
CHD4-209ENST00000542717 COL23A1Q86Y22 540 aaPredicted RBP5.07□□□□□ -1.6
CHD4-209ENST00000542717 GCC1Q96CN9 775 aa5.07□□□□□ -1.6
CHD4-209ENST00000542717 ALS2Q96Q42 1657 aa5.07□□□□□ -1.6
CHD4-209ENST00000542717 PAPPAQ13219 1627 aa5.07□□□□□ -1.6
CHD4-209ENST00000542717 BCL9O00512 1426 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 AKAP12Q02952 1782 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 TRPM3Q9HCF6 1732 aaPredicted RBP5.06□□□□□ -1.6
CHD4-209ENST00000542717 PHRF1Q9P1Y6 1649 aaKnown RBP5.06□□□□□ -1.6
CHD4-209ENST00000542717 CSB-PGBD3P0DP91 1061 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 BEGAINQ9BUH8 593 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 CREBZFQ9NS37 354 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 WBP1LQ9NX94 342 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 RNF181Q9P0P0 153 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 COL24A1Q17RW2 1714 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 IFT172Q9UG01 1749 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 USP6P35125 1406 aa5.06□□□□□ -1.6
CHD4-209ENST00000542717 ABCC11Q96J66 1382 aa5.05□□□□□ -1.6
CHD4-209ENST00000542717 RPGRIP1LQ68CZ1 1315 aa5.05□□□□□ -1.6
CHD4-209ENST00000542717 FCHSD2O94868 740 aa5.05□□□□□ -1.6
CHD4-209ENST00000542717 VEGFAP15692 232 aaPredicted RBP5.05□□□□□ -1.6
CHD4-209ENST00000542717 ABTB2Q8N961 1025 aa5.05□□□□□ -1.6
CHD4-209ENST00000542717 POGKQ9P215 609 aa5.05□□□□□ -1.6
CHD4-209ENST00000542717 ZNF219Q9P2Y4 722 aaPredicted RBP5.05□□□□□ -1.6
CHD4-209ENST00000542717 CRYBG1Q9Y4K1 1723 aa5.05□□□□□ -1.6
CHD4-209ENST00000542717 COL5A2P05997 1499 aaPredicted RBP5.05□□□□□ -1.6
CHD4-209ENST00000542717 C10orf71Q711Q0 1435 aa5.05□□□□□ -1.6
CHD4-209ENST00000542717 CNTNAP1P78357 1384 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 QSER1Q2KHR3 1735 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 VEGFBP49765 207 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 SOX10P56693 466 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 MAP2K1Q02750 393 aaPredicted RBP5.04□□□□□ -1.6
CHD4-209ENST00000542717 FAM50AQ14320 339 aaKnown RBP5.04□□□□□ -1.6
CHD4-209ENST00000542717 KANK4Q5T7N3 995 aaPredicted RBP5.04□□□□□ -1.6
CHD4-209ENST00000542717 SLC17A8Q8NDX2 589 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 SYTL4Q96C24 671 aaPredicted RBP5.04□□□□□ -1.6
CHD4-209ENST00000542717 MCOLN1Q9GZU1 580 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 PXDNLA1KZ92 1463 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 ANKARQ7Z5J8 1434 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 CPDO75976 1380 aa5.04□□□□□ -1.6
CHD4-209ENST00000542717 KIF1BO60333 1816 aa5.03□□□□□ -1.6
CHD4-209ENST00000542717 FLAD1Q8NFF5 587 aa5.03□□□□□ -1.6
CHD4-209ENST00000542717 PRAM1Q96QH2 718 aa5.03□□□□□ -1.6
CHD4-209ENST00000542717 CCNL1Q9UK58 526 aaPredicted RBP5.03□□□□□ -1.6
CHD4-209ENST00000542717 NHSQ6T4R5 1651 aa5.02□□□□□ -1.61
CHD4-209ENST00000542717 TNRC6CQ9HCJ0 1690 aaKnown RBP5.02□□□□□ -1.61
CHD4-209ENST00000542717 CICQ96RK0 1608 aaPredicted RBP5.02□□□□□ -1.61
CHD4-209ENST00000542717 A0A0G2JLW4 131 aa5.02□□□□□ -1.61
CHD4-209ENST00000542717 GCP02774 474 aa5.02□□□□□ -1.61
CHD4-209ENST00000542717 DGKZQ13574 1117 aa5.02□□□□□ -1.61
CHD4-209ENST00000542717 HABP4Q5JVS0 413 aaKnown RBP5.02□□□□□ -1.61
CHD4-209ENST00000542717 NLRP13Q86W25 1043 aa5.02□□□□□ -1.61
CHD4-209ENST00000542717 YTHDC2Q9H6S0 1430 aaKnown RBP5.02□□□□□ -1.61
CHD4-209ENST00000542717 EIF3AQ14152 1382 aaKnown RBP5.02□□□□□ -1.61
CHD4-209ENST00000542717 BTAF1O14981 1849 aa5.02□□□□□ -1.61
CHD4-209ENST00000542717 TUBGCP6Q96RT7 1819 aa5.02□□□□□ -1.61
CHD4-209ENST00000542717 ADGRF5Q8IZF2 1346 aa5.01□□□□□ -1.61
CHD4-209ENST00000542717 WDR17Q8IZU2 1322 aa5.01□□□□□ -1.61
CHD4-209ENST00000542717 CHADLQ6NUI6 762 aa5.01□□□□□ -1.61
CHD4-209ENST00000542717 PAXIP1Q6ZW49 1069 aaPredicted RBP5.01□□□□□ -1.61
CHD4-209ENST00000542717 NBPF15Q8N660 670 aa5.01□□□□□ -1.61
CHD4-209ENST00000542717 SIRT1Q96EB6 747 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 116.9 ms