RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 TOM1L2Q6ZVM7 507 aa23.04■■□□□ 1.28
CCND1-205ENST00000542367 CRB1P82279 1406 aa23.04■■□□□ 1.28
CCND1-205ENST00000542367 EDC4Q6P2E9 1401 aaKnown RBP23.04■■□□□ 1.28
CCND1-205ENST00000542367 PDE3BQ13370 1112 aa23.03■■□□□ 1.28
CCND1-205ENST00000542367 NINLQ9Y2I6 1382 aa23.02■■□□□ 1.28
CCND1-205ENST00000542367 NFAT5O94916 1531 aa23.02■■□□□ 1.28
CCND1-205ENST00000542367 BAG6P46379 1132 aa23.01■■□□□ 1.27
CCND1-205ENST00000542367 FAM196AQ6ZSG2 479 aa23.01■■□□□ 1.27
CCND1-205ENST00000542367 CCER1Q8TC90 406 aaPredicted RBP23.01■■□□□ 1.27
CCND1-205ENST00000542367 WDR17Q8IZU2 1322 aa23.01■■□□□ 1.27
CCND1-205ENST00000542367 RGPD5Q99666 1765 aa22.99■■□□□ 1.27
CCND1-205ENST00000542367 CSB-PGBD3P0DP91 1061 aa22.99■■□□□ 1.27
CCND1-205ENST00000542367 USP54Q70EL1 1684 aa22.98■■□□□ 1.27
CCND1-205ENST00000542367 TRIM37O94972 964 aa22.97■■□□□ 1.27
CCND1-205ENST00000542367 EN1Q05925 392 aaPredicted RBP22.96■■□□□ 1.27
CCND1-205ENST00000542367 RGPD1P0DJD0 1748 aa22.96■■□□□ 1.27
CCND1-205ENST00000542367 CDCA8Q53HL2 280 aa22.95■■□□□ 1.26
CCND1-205ENST00000542367 CARD10Q9BWT7 1032 aa22.95■■□□□ 1.26
CCND1-205ENST00000542367 PARP4Q9UKK3 1724 aaKnown RBP22.94■■□□□ 1.26
CCND1-205ENST00000542367 OVOS2A0A0J9YW53 1432 aa22.94■■□□□ 1.26
CCND1-205ENST00000542367 OVOS2Q6IE36 1432 aa22.94■■□□□ 1.26
CCND1-205ENST00000542367 ANKRD36BQ8N2N9 1353 aa22.94■■□□□ 1.26
CCND1-205ENST00000542367 DDB1Q16531 1140 aa22.93■■□□□ 1.26
CCND1-205ENST00000542367 ABCC6O95255 1503 aa22.92■■□□□ 1.26
CCND1-205ENST00000542367 COG3Q96JB2 828 aa22.92■■□□□ 1.26
CCND1-205ENST00000542367 CDCA7Q9BWT1 371 aaPredicted RBP22.91■■□□□ 1.26
CCND1-205ENST00000542367 LTN1O94822 1766 aa22.91■■□□□ 1.26
CCND1-205ENST00000542367 APBA3O96018 575 aa22.9■■□□□ 1.26
CCND1-205ENST00000542367 TNS1Q9HBL0 1735 aaKnown RBP22.9■■□□□ 1.26
CCND1-205ENST00000542367 DISP2A7MBM2 1401 aa22.89■■□□□ 1.25
CCND1-205ENST00000542367 ERBB3P21860 1342 aa22.88■■□□□ 1.25
CCND1-205ENST00000542367 EZH2Q15910 746 aaKnown RBP22.88■■□□□ 1.25
CCND1-205ENST00000542367 CCDC7Q96M83 1385 aa22.88■■□□□ 1.25
CCND1-205ENST00000542367 C11orf95C9JLR9 678 aaPredicted RBP22.87■■□□□ 1.25
CCND1-205ENST00000542367 FYB1O15117 783 aa22.87■■□□□ 1.25
CCND1-205ENST00000542367 FBLN1P23142 703 aa22.87■■□□□ 1.25
CCND1-205ENST00000542367 ANKRD24Q8TF21 1146 aa22.87■■□□□ 1.25
CCND1-205ENST00000542367 NLRP2Q9NX02 1062 aa22.87■■□□□ 1.25
CCND1-205ENST00000542367 SRCAPQ6ZRS2 3230 aa22.87■■□□□ 1.25
CCND1-205ENST00000542367 LRRC37A3O60309 1634 aa22.86■■□□□ 1.25
CCND1-205ENST00000542367 IP6K1Q92551 441 aa22.86■■□□□ 1.25
CCND1-205ENST00000542367 CAMKK2Q96RR4 588 aa22.86■■□□□ 1.25
CCND1-205ENST00000542367 WNK3Q9BYP7 1800 aa22.86■■□□□ 1.25
CCND1-205ENST00000542367 OVOS2A0A0G2JMS6 1433 aa22.85■■□□□ 1.25
CCND1-205ENST00000542367 EXOC5O00471 708 aa22.85■■□□□ 1.25
CCND1-205ENST00000542367 MARCH10Q8NA82 808 aaPredicted RBP22.85■■□□□ 1.25
CCND1-205ENST00000542367 GGNBP2Q9H3C7 697 aa22.85■■□□□ 1.25
CCND1-205ENST00000542367 MAP3K19Q56UN5 1328 aa22.83■■□□□ 1.25
CCND1-205ENST00000542367 EIF4G2P78344 907 aaKnown RBP eCLIP22.83■■□□□ 1.25
CCND1-205ENST00000542367 PSDA5PKW4 1024 aaPredicted RBP22.82■■□□□ 1.24
CCND1-205ENST00000542367 AMPHP49418 695 aa22.82■■□□□ 1.24
CCND1-205ENST00000542367 LTV1Q96GA3 475 aaPredicted RBP22.82■■□□□ 1.24
CCND1-205ENST00000542367 CARD14Q9BXL6 1004 aa22.82■■□□□ 1.24
CCND1-205ENST00000542367 PEAK1Q9H792 1746 aa22.82■■□□□ 1.24
CCND1-205ENST00000542367 HSPA5P11021 654 aaKnown RBP22.8■■□□□ 1.24
CCND1-205ENST00000542367 HOXC9P31274 260 aa22.8■■□□□ 1.24
CCND1-205ENST00000542367 POLR3GLQ9BT43 218 aa22.8■■□□□ 1.24
CCND1-205ENST00000542367 PARD3Q8TEW0 1356 aa22.79■■□□□ 1.24
CCND1-205ENST00000542367 MYOM1P52179 1685 aa22.79■■□□□ 1.24
CCND1-205ENST00000542367 IL2RBP14784 551 aa22.79■■□□□ 1.24
CCND1-205ENST00000542367 RRS1Q15050 365 aaKnown RBP22.79■■□□□ 1.24
CCND1-205ENST00000542367 SBF2Q86WG5 1849 aa22.78■■□□□ 1.24
CCND1-205ENST00000542367 R3HDM1Q15032 1099 aaKnown RBP22.77■■□□□ 1.24
CCND1-205ENST00000542367 BCL11BQ9C0K0 894 aaPredicted RBP22.77■■□□□ 1.24
CCND1-205ENST00000542367 NSD3Q9BZ95 1437 aa22.76■■□□□ 1.23
CCND1-205ENST00000542367 PTF1AQ7RTS3 328 aa22.76■■□□□ 1.23
CCND1-205ENST00000542367 BCL9O00512 1426 aa22.75■■□□□ 1.23
CCND1-205ENST00000542367 TNS2Q63HR2 1409 aa22.75■■□□□ 1.23
CCND1-205ENST00000542367 KIF20BQ96Q89 1820 aa22.74■■□□□ 1.23
CCND1-205ENST00000542367 PLSCR1O15162 318 aa22.73■■□□□ 1.23
CCND1-205ENST00000542367 RTL1A6NKG5 1358 aa22.72■■□□□ 1.23
CCND1-205ENST00000542367 RREB1Q92766 1687 aa22.71■■□□□ 1.23
CCND1-205ENST00000542367 FAM208AQ9UK61 1670 aaKnown RBP22.71■■□□□ 1.23
CCND1-205ENST00000542367 NBPF14Q5TI25 921 aa22.7■■□□□ 1.22
CCND1-205ENST00000542367 CGNL1Q0VF96 1302 aa22.69■■□□□ 1.22
CCND1-205ENST00000542367 KCNQ2O43526 872 aa22.69■■□□□ 1.22
CCND1-205ENST00000542367 HSP90AB2PQ58FF8 381 aa22.69■■□□□ 1.22
CCND1-205ENST00000542367 ACSBG1Q96GR2 724 aa22.68■■□□□ 1.22
CCND1-205ENST00000542367 RGPD2P0DJD1 1756 aa22.68■■□□□ 1.22
CCND1-205ENST00000542367 NUP188Q5SRE5 1749 aa22.68■■□□□ 1.22
CCND1-205ENST00000542367 NBPF6Q5VWK0 638 aa22.67■■□□□ 1.22
CCND1-205ENST00000542367 DDX54Q8TDD1 881 aaKnown RBP22.67■■□□□ 1.22
CCND1-205ENST00000542367 NBPF4Q96M43 638 aa22.67■■□□□ 1.22
CCND1-205ENST00000542367 EMILIN1Q9Y6C2 1016 aa22.66■■□□□ 1.22
CCND1-205ENST00000542367 INSRP06213 1382 aa22.65■■□□□ 1.22
CCND1-205ENST00000542367 FLT4P35916 1363 aa22.65■■□□□ 1.22
CCND1-205ENST00000542367 PROM2Q8N271 834 aa22.65■■□□□ 1.22
CCND1-205ENST00000542367 PANK3Q9H999 370 aa22.65■■□□□ 1.22
CCND1-205ENST00000542367 SMG6Q86US8 1419 aaKnown RBP22.65■■□□□ 1.22
CCND1-205ENST00000542367 KIF24Q5T7B8 1368 aa22.64■■□□□ 1.22
CCND1-205ENST00000542367 RGPD3A6NKT7 1758 aaPredicted RBP22.64■■□□□ 1.22
CCND1-205ENST00000542367 RGPD4Q7Z3J3 1758 aa22.64■■□□□ 1.22
CCND1-205ENST00000542367 USHBP1Q8N6Y0 703 aa22.64■■□□□ 1.21
CCND1-205ENST00000542367 PPM1GO15355 546 aaPredicted RBP22.63■■□□□ 1.21
CCND1-205ENST00000542367 ZCRB1Q8TBF4 217 aaKnown RBP22.63■■□□□ 1.21
CCND1-205ENST00000542367 KAT6BQ8WYB5 2073 aa22.62■■□□□ 1.21
CCND1-205ENST00000542367 LRP5O75197 1615 aa22.61■■□□□ 1.21
CCND1-205ENST00000542367 TXNRD1Q16881 649 aa22.61■■□□□ 1.21
CCND1-205ENST00000542367 NHSQ6T4R5 1651 aa22.61■■□□□ 1.21
CCND1-205ENST00000542367 MEGF6O75095 1541 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms