RNA–Protein interactions for RNA: ENST00000542029.1

VTN-203, Transcript of vitronectin, humanhuman

TSL 3

Gene VTN, Length 501 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-203ENST00000542029 LMO7Q8WWI1 1683 aa16.04■□□□□ 0.16
VTN-203ENST00000542029 ST20-MTHFSA0A0A6YYL1 179 aa16.03■□□□□ 0.16
VTN-203ENST00000542029 APBA3O96018 575 aa16.03■□□□□ 0.16
VTN-203ENST00000542029 DDB1Q16531 1140 aa16.03■□□□□ 0.16
VTN-203ENST00000542029 TESK2Q96S53 571 aa16.03■□□□□ 0.16
VTN-203ENST00000542029 CARD10Q9BWT7 1032 aa16.03■□□□□ 0.16
VTN-203ENST00000542029 TIMELESSQ9UNS1 1208 aa16.03■□□□□ 0.16
VTN-203ENST00000542029 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.16
VTN-203ENST00000542029 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.15
VTN-203ENST00000542029 CLSPNQ9HAW4 1339 aa16■□□□□ 0.15
VTN-203ENST00000542029 EZH2Q15910 746 aaKnown RBP16■□□□□ 0.15
VTN-203ENST00000542029 NME9Q86XW9 330 aa16■□□□□ 0.15
VTN-203ENST00000542029 CCDC7Q96M83 1385 aa16■□□□□ 0.15
VTN-203ENST00000542029 CDCA8Q53HL2 280 aa15.99■□□□□ 0.15
VTN-203ENST00000542029 OVOS2A0A0G2JMS6 1433 aa15.99■□□□□ 0.15
VTN-203ENST00000542029 OVOS2A0A0J9YW53 1432 aa15.99■□□□□ 0.15
VTN-203ENST00000542029 OVOS2Q6IE36 1432 aa15.99■□□□□ 0.15
VTN-203ENST00000542029 PIK3C2AO00443 1686 aa15.99■□□□□ 0.15
VTN-203ENST00000542029 CD163L1Q9NR16 1453 aa15.98■□□□□ 0.15
VTN-203ENST00000542029 TMF1P82094 1093 aa15.98■□□□□ 0.15
VTN-203ENST00000542029 A0A1W2PP64 1363 aa15.98■□□□□ 0.15
VTN-203ENST00000542029 PSDA5PKW4 1024 aaPredicted RBP15.97■□□□□ 0.15
VTN-203ENST00000542029 EXOC5O00471 708 aa15.97■□□□□ 0.15
VTN-203ENST00000542029 NBPF14Q5TI25 921 aa15.97■□□□□ 0.15
VTN-203ENST00000542029 ABCC6O95255 1503 aa15.97■□□□□ 0.15
VTN-203ENST00000542029 R3HDM1Q15032 1099 aaKnown RBP15.96■□□□□ 0.15
VTN-203ENST00000542029 RGPD1P0DJD0 1748 aa15.96■□□□□ 0.15
VTN-203ENST00000542029 ERBB3P21860 1342 aa15.95■□□□□ 0.14
VTN-203ENST00000542029 BCL9O00512 1426 aa15.95■□□□□ 0.14
VTN-203ENST00000542029 NFAT5O94916 1531 aa15.95■□□□□ 0.14
VTN-203ENST00000542029 COG3Q96JB2 828 aa15.95■□□□□ 0.14
VTN-203ENST00000542029 BCL11BQ9C0K0 894 aaPredicted RBP15.95■□□□□ 0.14
VTN-203ENST00000542029 USP47Q96K76 1375 aa15.95■□□□□ 0.14
VTN-203ENST00000542029 PLSCR1O15162 318 aa15.94■□□□□ 0.14
VTN-203ENST00000542029 NLRP2Q9NX02 1062 aa15.94■□□□□ 0.14
VTN-203ENST00000542029 AKAP12Q02952 1782 aa15.94■□□□□ 0.14
VTN-203ENST00000542029 ANKRD36BQ8N2N9 1353 aa15.93■□□□□ 0.14
VTN-203ENST00000542029 MARCH10Q8NA82 808 aaPredicted RBP15.93■□□□□ 0.14
VTN-203ENST00000542029 ANKRD24Q8TF21 1146 aa15.92■□□□□ 0.14
VTN-203ENST00000542029 IP6K1Q92551 441 aa15.92■□□□□ 0.14
VTN-203ENST00000542029 COL18A1P39060 1754 aa15.91■□□□□ 0.14
VTN-203ENST00000542029 IL2RBP14784 551 aa15.91■□□□□ 0.14
VTN-203ENST00000542029 PARP4Q9UKK3 1724 aaKnown RBP15.91■□□□□ 0.14
VTN-203ENST00000542029 PCGF6Q9BYE7 350 aa15.9■□□□□ 0.14
VTN-203ENST00000542029 MON2Q7Z3U7 1717 aa15.9■□□□□ 0.14
VTN-203ENST00000542029 AMPHP49418 695 aa15.89■□□□□ 0.13
VTN-203ENST00000542029 TNS2Q63HR2 1409 aa15.87■□□□□ 0.13
VTN-203ENST00000542029 TNS1Q9HBL0 1735 aaKnown RBP15.87■□□□□ 0.13
VTN-203ENST00000542029 FYB1O15117 783 aa15.86■□□□□ 0.13
VTN-203ENST00000542029 MAP3K19Q56UN5 1328 aa15.86■□□□□ 0.13
VTN-203ENST00000542029 USP54Q70EL1 1684 aa15.86■□□□□ 0.13
VTN-203ENST00000542029 HOXC9P31274 260 aa15.85■□□□□ 0.13
VTN-203ENST00000542029 LRRC37A3O60309 1634 aa15.85■□□□□ 0.13
VTN-203ENST00000542029 LRP5O75197 1615 aa15.84■□□□□ 0.13
VTN-203ENST00000542029 LTV1Q96GA3 475 aaPredicted RBP15.84■□□□□ 0.13
VTN-203ENST00000542029 RTL1A6NKG5 1358 aa15.84■□□□□ 0.13
VTN-203ENST00000542029 GGNBP2Q9H3C7 697 aa15.83■□□□□ 0.12
VTN-203ENST00000542029 TXNRD1Q16881 649 aa15.82■□□□□ 0.12
VTN-203ENST00000542029 PTF1AQ7RTS3 328 aa15.82■□□□□ 0.12
VTN-203ENST00000542029 SPON1Q9HCB6 807 aa15.82■□□□□ 0.12
VTN-203ENST00000542029 PEAK1Q9H792 1746 aa15.82■□□□□ 0.12
VTN-203ENST00000542029 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
VTN-203ENST00000542029 PROM2Q8N271 834 aa15.81■□□□□ 0.12
VTN-203ENST00000542029 CGNL1Q0VF96 1302 aa15.8■□□□□ 0.12
VTN-203ENST00000542029 KCNQ2O43526 872 aa15.8■□□□□ 0.12
VTN-203ENST00000542029 RRS1Q15050 365 aaKnown RBP15.8■□□□□ 0.12
VTN-203ENST00000542029 FBLN1P23142 703 aa15.79■□□□□ 0.12
VTN-203ENST00000542029 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
VTN-203ENST00000542029 ACSBG1Q96GR2 724 aa15.79■□□□□ 0.12
VTN-203ENST00000542029 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
VTN-203ENST00000542029 SMG6Q86US8 1419 aaKnown RBP15.78■□□□□ 0.12
VTN-203ENST00000542029 EIF4G2P78344 907 aaKnown RBP eCLIP15.78■□□□□ 0.12
VTN-203ENST00000542029 ZCRB1Q8TBF4 217 aaKnown RBP15.78■□□□□ 0.12
VTN-203ENST00000542029 DDX54Q8TDD1 881 aaKnown RBP15.78■□□□□ 0.12
VTN-203ENST00000542029 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
VTN-203ENST00000542029 CARD14Q9BXL6 1004 aa15.77■□□□□ 0.12
VTN-203ENST00000542029 PPP1R1BQ9UD71 204 aaPredicted RBP15.77■□□□□ 0.12
VTN-203ENST00000542029 RREB1Q92766 1687 aa15.76■□□□□ 0.11
VTN-203ENST00000542029 FLT4P35916 1363 aa15.76■□□□□ 0.11
VTN-203ENST00000542029 SLC15A2Q16348 729 aa15.76■□□□□ 0.11
VTN-203ENST00000542029 RAPGEF4Q8WZA2 1011 aa15.76■□□□□ 0.11
VTN-203ENST00000542029 INSRP06213 1382 aa15.75■□□□□ 0.11
VTN-203ENST00000542029 NBPF6Q5VWK0 638 aa15.75■□□□□ 0.11
VTN-203ENST00000542029 NBPF4Q96M43 638 aa15.75■□□□□ 0.11
VTN-203ENST00000542029 NSD3Q9BZ95 1437 aa15.75■□□□□ 0.11
VTN-203ENST00000542029 RGPD3A6NKT7 1758 aaPredicted RBP15.75■□□□□ 0.11
VTN-203ENST00000542029 RGPD4Q7Z3J3 1758 aa15.75■□□□□ 0.11
VTN-203ENST00000542029 RGPD5Q99666 1765 aa15.75■□□□□ 0.11
VTN-203ENST00000542029 HSP90AB2PQ58FF8 381 aa15.74■□□□□ 0.11
VTN-203ENST00000542029 SLC27A3Q5K4L6 730 aa15.74■□□□□ 0.11
VTN-203ENST00000542029 WNK3Q9BYP7 1800 aa15.73■□□□□ 0.11
VTN-203ENST00000542029 TATP17735 454 aaPredicted RBP15.73■□□□□ 0.11
VTN-203ENST00000542029 HMGB2P26583 209 aaKnown RBP15.73■□□□□ 0.11
VTN-203ENST00000542029 NUP188Q5SRE5 1749 aa15.73■□□□□ 0.11
VTN-203ENST00000542029 LTN1O94822 1766 aa15.72■□□□□ 0.11
VTN-203ENST00000542029 POLR3GLQ9BT43 218 aa15.72■□□□□ 0.11
VTN-203ENST00000542029 DCAF8L1A6NGE4 600 aa15.71■□□□□ 0.11
VTN-203ENST00000542029 PRIM1P49642 420 aaKnown RBP15.71■□□□□ 0.11
VTN-203ENST00000542029 SYTL4Q96C24 671 aaPredicted RBP15.71■□□□□ 0.11
VTN-203ENST00000542029 HSPA5P11021 654 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms