RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 CARD11Q9BXL7 1154 aa34.17■■■■□ 3.06
LEMD3-203ENST00000541171 OVOS2A0A0G2JMS6 1433 aa34.16■■■■□ 3.06
LEMD3-203ENST00000541171 OVOS2A0A0J9YW53 1432 aa34.16■■■■□ 3.06
LEMD3-203ENST00000541171 OVOS2Q6IE36 1432 aa34.16■■■■□ 3.06
LEMD3-203ENST00000541171 AKAP12Q02952 1782 aa34.16■■■■□ 3.06
LEMD3-203ENST00000541171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP34.14■■■■□ 3.062e-6■■■□□ 16.7
LEMD3-203ENST00000541171 RREB1Q92766 1687 aa34.13■■■■□ 3.05
LEMD3-203ENST00000541171 NUP188Q5SRE5 1749 aa34.11■■■■□ 3.05
LEMD3-203ENST00000541171 TMC1Q8TDI8 760 aa34.11■■■■□ 3.05
LEMD3-203ENST00000541171 LRRC37A3O60309 1634 aa34.11■■■■□ 3.05
LEMD3-203ENST00000541171 CDCA7Q9BWT1 371 aaPredicted RBP34.1■■■■□ 3.05
LEMD3-203ENST00000541171 MARCH10Q8NA82 808 aaPredicted RBP34.09■■■■□ 3.05
LEMD3-203ENST00000541171 CARD10Q9BWT7 1032 aa34.09■■■■□ 3.05
LEMD3-203ENST00000541171 PEAK1Q9H792 1746 aa34.08■■■■□ 3.05
LEMD3-203ENST00000541171 PTF1AQ7RTS3 328 aa34.07■■■■□ 3.04
LEMD3-203ENST00000541171 RGPD5Q99666 1765 aa34.07■■■■□ 3.04
LEMD3-203ENST00000541171 SBNO2Q9Y2G9 1366 aa34.07■■■■□ 3.04
LEMD3-203ENST00000541171 NFAT5O94916 1531 aa34.05■■■■□ 3.04
LEMD3-203ENST00000541171 NME9Q86XW9 330 aa34.05■■■■□ 3.04
LEMD3-203ENST00000541171 BCL11BQ9C0K0 894 aaPredicted RBP34.05■■■■□ 3.04
LEMD3-203ENST00000541171 TONSLQ96HA7 1378 aa34.05■■■■□ 3.04
LEMD3-203ENST00000541171 PLSCR1O15162 318 aa34.03■■■■□ 3.04
LEMD3-203ENST00000541171 HDGFL2Q7Z4V5 671 aaPredicted RBP34.03■■■■□ 3.04
LEMD3-203ENST00000541171 SLC12A5Q9H2X9 1139 aa34.03■■■■□ 3.04
LEMD3-203ENST00000541171 EXOC5O00471 708 aa34.02■■■■□ 3.04
LEMD3-203ENST00000541171 MON2Q7Z3U7 1717 aa34.01■■■■□ 3.04
LEMD3-203ENST00000541171 WNK3Q9BYP7 1800 aa34.01■■■■□ 3.03
LEMD3-203ENST00000541171 USP31Q70CQ4 1352 aa34■■■■□ 3.03
LEMD3-203ENST00000541171 SBF2Q86WG5 1849 aa34■■■■□ 3.03
LEMD3-203ENST00000541171 CD163L1Q9NR16 1453 aa34■■■■□ 3.03
LEMD3-203ENST00000541171 CCDC7Q96M83 1385 aa33.98■■■■□ 3.03
LEMD3-203ENST00000541171 SPON1Q9HCB6 807 aa33.96■■■■□ 3.03
LEMD3-203ENST00000541171 NLRP2Q9NX02 1062 aa33.96■■■■□ 3.03
LEMD3-203ENST00000541171 KCNQ2O43526 872 aa33.94■■■■□ 3.02
LEMD3-203ENST00000541171 ANO8Q9HCE9 1232 aaPredicted RBP33.94■■■■□ 3.02
LEMD3-203ENST00000541171 TERF2IPQ9NYB0 399 aa33.94■■■■□ 3.02
LEMD3-203ENST00000541171 PPP1R1BQ9UD71 204 aaPredicted RBP33.94■■■■□ 3.02
LEMD3-203ENST00000541171 BCL9O00512 1426 aa33.93■■■■□ 3.02
LEMD3-203ENST00000541171 PROM2Q8N271 834 aa33.92■■■■□ 3.02
LEMD3-203ENST00000541171 ABCC6O95255 1503 aa33.92■■■■□ 3.02
LEMD3-203ENST00000541171 ERBB3P21860 1342 aa33.91■■■■□ 3.02
LEMD3-203ENST00000541171 EDC4Q6P2E9 1401 aaKnown RBP33.9■■■■□ 3.02
LEMD3-203ENST00000541171 A0A1W2PP64 1363 aa33.9■■■■□ 3.02
LEMD3-203ENST00000541171 ANKRD24Q8TF21 1146 aa33.9■■■■□ 3.02
LEMD3-203ENST00000541171 RGPD3A6NKT7 1758 aaPredicted RBP33.9■■■■□ 3.02
LEMD3-203ENST00000541171 RGPD4Q7Z3J3 1758 aa33.9■■■■□ 3.02
LEMD3-203ENST00000541171 TNS2Q63HR2 1409 aa33.87■■■■□ 3.01
LEMD3-203ENST00000541171 TXNRD1Q16881 649 aa33.86■■■■□ 3.01
LEMD3-203ENST00000541171 ACSBG1Q96GR2 724 aa33.86■■■■□ 3.01
LEMD3-203ENST00000541171 PUS7Q96PZ0 661 aaKnown RBP33.86■■■■□ 3.01
LEMD3-203ENST00000541171 USP54Q70EL1 1684 aa33.86■■■■□ 3.01
LEMD3-203ENST00000541171 ST20-MTHFSA0A0A6YYL1 179 aa33.85■■■■□ 3.01
LEMD3-203ENST00000541171 IL2RBP14784 551 aa33.85■■■■□ 3.01
LEMD3-203ENST00000541171 PDGFDQ9GZP0 370 aaPredicted RBP33.84■■■■□ 3.01
LEMD3-203ENST00000541171 LTN1O94822 1766 aa33.84■■■■□ 3.01
LEMD3-203ENST00000541171 TESK2Q96S53 571 aa33.82■■■■□ 3
LEMD3-203ENST00000541171 STK32BQ9NY57 414 aa33.82■■■■□ 3
LEMD3-203ENST00000541171 LTV1Q96GA3 475 aaPredicted RBP33.81■■■■□ 3
LEMD3-203ENST00000541171 ZBTB7AO95365 584 aa33.79■■■■□ 3
LEMD3-203ENST00000541171 IP6K1Q92551 441 aa33.78■■■■□ 3
LEMD3-203ENST00000541171 COG3Q96JB2 828 aa33.76■■■□□ 2.99
LEMD3-203ENST00000541171 SLC15A2Q16348 729 aa33.75■■■□□ 2.99
LEMD3-203ENST00000541171 ATF5Q9Y2D1 282 aaPredicted RBP33.74■■■□□ 2.99
LEMD3-203ENST00000541171 NINLQ9Y2I6 1382 aa33.73■■■□□ 2.99
LEMD3-203ENST00000541171 CASZ1Q86V15 1759 aa33.73■■■□□ 2.99
LEMD3-203ENST00000541171 FBLN1P23142 703 aa33.73■■■□□ 2.99
LEMD3-203ENST00000541171 NHSQ6T4R5 1651 aa33.71■■■□□ 2.99
LEMD3-203ENST00000541171 DCAF8L1A6NGE4 600 aa33.71■■■□□ 2.99
LEMD3-203ENST00000541171 SLC24A1O60721 1099 aa33.71■■■□□ 2.99
LEMD3-203ENST00000541171 DDX54Q8TDD1 881 aaKnown RBP33.7■■■□□ 2.99
LEMD3-203ENST00000541171 AMPHP49418 695 aa33.69■■■□□ 2.98
LEMD3-203ENST00000541171 MAP3K19Q56UN5 1328 aa33.69■■■□□ 2.98
LEMD3-203ENST00000541171 YY1P25490 414 aa33.68■■■□□ 2.98
LEMD3-203ENST00000541171 KAT6BQ8WYB5 2073 aa33.67■■■□□ 2.98
LEMD3-203ENST00000541171 HOXC9P31274 260 aa33.67■■■□□ 2.98
LEMD3-203ENST00000541171 PTGER2P43116 358 aa33.65■■■□□ 2.98
LEMD3-203ENST00000541171 TRIM26Q12899 539 aaPredicted RBP33.64■■■□□ 2.98
LEMD3-203ENST00000541171 ANKRD36BQ8N2N9 1353 aa33.63■■■□□ 2.97
LEMD3-203ENST00000541171 TMF1P82094 1093 aa33.63■■■□□ 2.97
LEMD3-203ENST00000541171 BTAF1O14981 1849 aa33.61■■■□□ 2.97
LEMD3-203ENST00000541171 GGNBP2Q9H3C7 697 aa33.61■■■□□ 2.97
LEMD3-203ENST00000541171 MTFR1LQ9H019 292 aa33.6■■■□□ 2.97
LEMD3-203ENST00000541171 USP47Q96K76 1375 aa33.6■■■□□ 2.97
LEMD3-203ENST00000541171 RRS1Q15050 365 aaKnown RBP33.59■■■□□ 2.97
LEMD3-203ENST00000541171 SYTL4Q96C24 671 aaPredicted RBP33.59■■■□□ 2.97
LEMD3-203ENST00000541171 LRRC4BQ9NT99 713 aa33.59■■■□□ 2.97
LEMD3-203ENST00000541171 MYOM1P52179 1685 aa33.58■■■□□ 2.97
LEMD3-203ENST00000541171 FYB1O15117 783 aa33.57■■■□□ 2.96
LEMD3-203ENST00000541171 FAM208AQ9UK61 1670 aaKnown RBP33.57■■■□□ 2.96
LEMD3-203ENST00000541171 ZNF827Q17R98 1081 aa33.56■■■□□ 2.96
LEMD3-203ENST00000541171 PRIM1P49642 420 aaKnown RBP33.54■■■□□ 2.96
LEMD3-203ENST00000541171 ZCRB1Q8TBF4 217 aaKnown RBP33.54■■■□□ 2.96
LEMD3-203ENST00000541171 FHDC1Q9C0D6 1143 aaPredicted RBP33.54■■■□□ 2.96
LEMD3-203ENST00000541171 USHBP1Q8N6Y0 703 aa33.52■■■□□ 2.96
LEMD3-203ENST00000541171 PAPPAQ13219 1627 aa33.52■■■□□ 2.96
LEMD3-203ENST00000541171 NBPF6Q5VWK0 638 aa33.51■■■□□ 2.95
LEMD3-203ENST00000541171 NBPF4Q96M43 638 aa33.51■■■□□ 2.95
LEMD3-203ENST00000541171 SGIP1Q9BQI5 828 aa33.51■■■□□ 2.95
LEMD3-203ENST00000541171 SYT17Q9BSW7 474 aa33.51■■■□□ 2.95
LEMD3-203ENST00000541171 RTL1A6NKG5 1358 aa33.5■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms