RNA–Protein interactions for RNA: ENST00000540925.5

USP28-209, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 4

Gene USP28, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-209ENST00000540925 HSPA5P11021 654 aaKnown RBP19.84■□□□□ 0.77
USP28-209ENST00000540925 EVA1CP58658 441 aa19.84■□□□□ 0.77
USP28-209ENST00000540925 EIF4G2P78344 907 aaKnown RBP eCLIP19.84■□□□□ 0.77
USP28-209ENST00000540925 RGPD5Q99666 1765 aa19.83■□□□□ 0.77
USP28-209ENST00000540925 CCDC125Q86Z20 511 aa19.82■□□□□ 0.76
USP28-209ENST00000540925 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
USP28-209ENST00000540925 THRAP3Q9Y2W1 955 aaKnown RBP19.82■□□□□ 0.76
USP28-209ENST00000540925 WDR17Q8IZU2 1322 aa19.81■□□□□ 0.76
USP28-209ENST00000540925 LTN1O94822 1766 aa19.81■□□□□ 0.76
USP28-209ENST00000540925 SOX12O15370 315 aa19.81■□□□□ 0.76
USP28-209ENST00000540925 PARP4Q9UKK3 1724 aaKnown RBP19.8■□□□□ 0.76
USP28-209ENST00000540925 BLMP54132 1417 aaPredicted RBP19.8■□□□□ 0.76
USP28-209ENST00000540925 FYB1O15117 783 aa19.8■□□□□ 0.76
USP28-209ENST00000540925 CARD14Q9BXL6 1004 aa19.8■□□□□ 0.76
USP28-209ENST00000540925 ZBTB7CA1YPR0 619 aa19.79■□□□□ 0.76
USP28-209ENST00000540925 USP35Q9P2H5 1018 aa19.79■□□□□ 0.76
USP28-209ENST00000540925 WNK3Q9BYP7 1800 aa19.77■□□□□ 0.76
USP28-209ENST00000540925 A0A0G2JS52 829 aa19.77■□□□□ 0.76
USP28-209ENST00000540925 MYT1Q01538 1121 aa19.77■□□□□ 0.76
USP28-209ENST00000540925 COG3Q96JB2 828 aa19.76■□□□□ 0.75
USP28-209ENST00000540925 KIF20BQ96Q89 1820 aa19.76■□□□□ 0.75
USP28-209ENST00000540925 DISP2A7MBM2 1401 aa19.76■□□□□ 0.75
USP28-209ENST00000540925 ERBB3P21860 1342 aa19.76■□□□□ 0.75
USP28-209ENST00000540925 CARD10Q9BWT7 1032 aa19.75■□□□□ 0.75
USP28-209ENST00000540925 NSD3Q9BZ95 1437 aa19.75■□□□□ 0.75
USP28-209ENST00000540925 LRRC37A3O60309 1634 aa19.74■□□□□ 0.75
USP28-209ENST00000540925 C11orf95C9JLR9 678 aaPredicted RBP19.74■□□□□ 0.75
USP28-209ENST00000540925 TOM1L2Q6ZVM7 507 aa19.74■□□□□ 0.75
USP28-209ENST00000540925 FAM182BQ5T319 152 aa19.73■□□□□ 0.75
USP28-209ENST00000540925 IP6K1Q92551 441 aa19.73■□□□□ 0.75
USP28-209ENST00000540925 GGNBP2Q9H3C7 697 aa19.73■□□□□ 0.75
USP28-209ENST00000540925 MAP3K19Q56UN5 1328 aa19.73■□□□□ 0.75
USP28-209ENST00000540925 PEAK1Q9H792 1746 aa19.72■□□□□ 0.75
USP28-209ENST00000540925 CCDC7Q96M83 1385 aa19.71■□□□□ 0.75
USP28-209ENST00000540925 FBLN1P23142 703 aa19.71■□□□□ 0.75
USP28-209ENST00000540925 RGPD1P0DJD0 1748 aa19.71■□□□□ 0.75
USP28-209ENST00000540925 TNS1Q9HBL0 1735 aaKnown RBP19.71■□□□□ 0.75
USP28-209ENST00000540925 RTL1A6NKG5 1358 aa19.7■□□□□ 0.74
USP28-209ENST00000540925 FAM196AQ6ZSG2 479 aa19.69■□□□□ 0.74
USP28-209ENST00000540925 ANKRD24Q8TF21 1146 aa19.69■□□□□ 0.74
USP28-209ENST00000540925 CDCA7Q9BWT1 371 aaPredicted RBP19.69■□□□□ 0.74
USP28-209ENST00000540925 HOXC9P31274 260 aa19.68■□□□□ 0.74
USP28-209ENST00000540925 FAM208AQ9UK61 1670 aaKnown RBP19.68■□□□□ 0.74
USP28-209ENST00000540925 CSB-PGBD3P0DP91 1061 aa19.67■□□□□ 0.74
USP28-209ENST00000540925 PDE3BQ13370 1112 aa19.67■□□□□ 0.74
USP28-209ENST00000540925 DEFB132Q7Z7B7 95 aa19.67■□□□□ 0.74
USP28-209ENST00000540925 BCL9O00512 1426 aa19.66■□□□□ 0.74
USP28-209ENST00000540925 ANKRD26Q9UPS8 1709 aa19.65■□□□□ 0.74
USP28-209ENST00000540925 RRS1Q15050 365 aaKnown RBP19.65■□□□□ 0.74
USP28-209ENST00000540925 DDB1Q16531 1140 aa19.65■□□□□ 0.74
USP28-209ENST00000540925 CGNL1Q0VF96 1302 aa19.65■□□□□ 0.74
USP28-209ENST00000540925 KIF24Q5T7B8 1368 aa19.65■□□□□ 0.74
USP28-209ENST00000540925 KIF7Q2M1P5 1343 aa19.64■□□□□ 0.73
USP28-209ENST00000540925 OVOS2A0A0G2JMS6 1433 aa19.64■□□□□ 0.73
USP28-209ENST00000540925 TNS2Q63HR2 1409 aa19.64■□□□□ 0.73
USP28-209ENST00000540925 SF3B2Q13435 895 aaKnown RBP19.63■□□□□ 0.73
USP28-209ENST00000540925 POLR3GLQ9BT43 218 aa19.63■□□□□ 0.73
USP28-209ENST00000540925 PANK3Q9H999 370 aa19.63■□□□□ 0.73
USP28-209ENST00000540925 NLRP2Q9NX02 1062 aa19.63■□□□□ 0.73
USP28-209ENST00000540925 AMPHP49418 695 aa19.62■□□□□ 0.73
USP28-209ENST00000540925 MARCH10Q8NA82 808 aaPredicted RBP19.62■□□□□ 0.73
USP28-209ENST00000540925 INSRP06213 1382 aa19.61■□□□□ 0.73
USP28-209ENST00000540925 FLT4P35916 1363 aa19.61■□□□□ 0.73
USP28-209ENST00000540925 SBF2Q86WG5 1849 aa19.61■□□□□ 0.73
USP28-209ENST00000540925 TRIM37O94972 964 aa19.6■□□□□ 0.73
USP28-209ENST00000540925 BAG6P46379 1132 aa19.6■□□□□ 0.73
USP28-209ENST00000540925 RGPD2P0DJD1 1756 aa19.6■□□□□ 0.73
USP28-209ENST00000540925 IL2RBP14784 551 aa19.59■□□□□ 0.73
USP28-209ENST00000540925 NSD2O96028 1365 aa19.58■□□□□ 0.73
USP28-209ENST00000540925 HSP90AB2PQ58FF8 381 aa19.58■□□□□ 0.72
USP28-209ENST00000540925 LTV1Q96GA3 475 aaPredicted RBP19.58■□□□□ 0.72
USP28-209ENST00000540925 CAMKK2Q96RR4 588 aa19.58■□□□□ 0.72
USP28-209ENST00000540925 EMILIN1Q9Y6C2 1016 aa19.58■□□□□ 0.72
USP28-209ENST00000540925 EXOC5O00471 708 aa19.57■□□□□ 0.72
USP28-209ENST00000540925 EN1Q05925 392 aaPredicted RBP19.57■□□□□ 0.72
USP28-209ENST00000540925 NCAPD2Q15021 1401 aa19.56■□□□□ 0.72
USP28-209ENST00000540925 PARD3Q8TEW0 1356 aa19.56■□□□□ 0.72
USP28-209ENST00000540925 NBPF6Q5VWK0 638 aa19.55■□□□□ 0.72
USP28-209ENST00000540925 NBPF4Q96M43 638 aa19.55■□□□□ 0.72
USP28-209ENST00000540925 POLKQ9UBT6 870 aa19.55■□□□□ 0.72
USP28-209ENST00000540925 MAP2P11137 1827 aaKnown RBP19.55■□□□□ 0.72
USP28-209ENST00000540925 RREB1Q92766 1687 aa19.55■□□□□ 0.72
USP28-209ENST00000540925 MEGF6O75095 1541 aa19.55■□□□□ 0.72
USP28-209ENST00000540925 WASHC2AQ641Q2 1341 aa19.54■□□□□ 0.72
USP28-209ENST00000540925 SMG6Q86US8 1419 aaKnown RBP19.54■□□□□ 0.72
USP28-209ENST00000540925 RGPD3A6NKT7 1758 aaPredicted RBP19.54■□□□□ 0.72
USP28-209ENST00000540925 RGPD4Q7Z3J3 1758 aa19.54■□□□□ 0.72
USP28-209ENST00000540925 SHANK3Q9BYB0 1731 aa19.54■□□□□ 0.72
USP28-209ENST00000540925 PER1O15534 1290 aaPredicted RBP19.53■□□□□ 0.72
USP28-209ENST00000540925 APBA3O96018 575 aa19.53■□□□□ 0.72
USP28-209ENST00000540925 EZH2Q15910 746 aaKnown RBP19.53■□□□□ 0.72
USP28-209ENST00000540925 AMER1Q5JTC6 1135 aaPredicted RBP19.53■□□□□ 0.72
USP28-209ENST00000540925 PTF1AQ7RTS3 328 aa19.53■□□□□ 0.72
USP28-209ENST00000540925 BCL11BQ9C0K0 894 aaPredicted RBP19.52■□□□□ 0.72
USP28-209ENST00000540925 NHSQ6T4R5 1651 aa19.51■□□□□ 0.71
USP28-209ENST00000540925 NUP188Q5SRE5 1749 aa19.49■□□□□ 0.71
USP28-209ENST00000540925 PLSCR1O15162 318 aa19.49■□□□□ 0.71
USP28-209ENST00000540925 KNSTRNQ9Y448 316 aa19.49■□□□□ 0.71
USP28-209ENST00000540925 USHBP1Q8N6Y0 703 aa19.48■□□□□ 0.71
USP28-209ENST00000540925 KCNQ2O43526 872 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms