RNA–Protein interactions for RNA: ENST00000540301.1

KLHL42-203, Transcript of kelch like family member 42, humanhuman

TSL 3

Gene KLHL42, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL42-203ENST00000540301 LRRC37A3O60309 1634 aa12.28□□□□□ -0.44
KLHL42-203ENST00000540301 BCL9O00512 1426 aa12.28□□□□□ -0.44
KLHL42-203ENST00000540301 COL5A2P05997 1499 aaPredicted RBP12.27□□□□□ -0.44
KLHL42-203ENST00000540301 CAPN15O75808 1086 aa12.27□□□□□ -0.45
KLHL42-203ENST00000540301 AATKQ6ZMQ8 1374 aa12.27□□□□□ -0.45
KLHL42-203ENST00000540301 POLD1P28340 1107 aa12.26□□□□□ -0.45
KLHL42-203ENST00000540301 ABTB2Q8N961 1025 aa12.26□□□□□ -0.45
KLHL42-203ENST00000540301 NLGN2Q8NFZ4 835 aa12.26□□□□□ -0.45
KLHL42-203ENST00000540301 YBX3P16989 372 aaKnown RBP eCLIP12.25□□□□□ -0.45
KLHL42-203ENST00000540301 TRAK1Q9UPV9 953 aa12.25□□□□□ -0.45
KLHL42-203ENST00000540301 GCP02774 474 aa12.24□□□□□ -0.45
KLHL42-203ENST00000540301 TOM1L2Q6ZVM7 507 aa12.24□□□□□ -0.45
KLHL42-203ENST00000540301 ZNF526Q8TF50 670 aaPredicted RBP12.24□□□□□ -0.45
KLHL42-203ENST00000540301 NUDT16Q96DE0 195 aaKnown RBP12.24□□□□□ -0.45
KLHL42-203ENST00000540301 USP19O94966 1318 aa12.23□□□□□ -0.45
KLHL42-203ENST00000540301 ZBTB7CA1YPR0 619 aa12.23□□□□□ -0.45
KLHL42-203ENST00000540301 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
KLHL42-203ENST00000540301 CDCA7Q9BWT1 371 aaPredicted RBP12.23□□□□□ -0.45
KLHL42-203ENST00000540301 AKAP12Q02952 1782 aa12.23□□□□□ -0.45
KLHL42-203ENST00000540301 APLP1P51693 650 aa12.22□□□□□ -0.45
KLHL42-203ENST00000540301 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
KLHL42-203ENST00000540301 COL13A1Q5TAT6 717 aaPredicted RBP12.22□□□□□ -0.45
KLHL42-203ENST00000540301 NLRP13Q86W25 1043 aa12.22□□□□□ -0.45
KLHL42-203ENST00000540301 ITSN1Q15811 1721 aa12.22□□□□□ -0.45
KLHL42-203ENST00000540301 GOLGB1Q14789 3259 aaKnown RBP12.21□□□□□ -0.45
KLHL42-203ENST00000540301 ACEP12821 1306 aa12.21□□□□□ -0.45
KLHL42-203ENST00000540301 TOPAZ1Q8N9V7 1692 aa12.21□□□□□ -0.45
KLHL42-203ENST00000540301 POLR3AO14802 1390 aaPredicted RBP12.2□□□□□ -0.46
KLHL42-203ENST00000540301 PAPPAQ13219 1627 aa12.2□□□□□ -0.46
KLHL42-203ENST00000540301 PRELPP51888 382 aa12.2□□□□□ -0.46
KLHL42-203ENST00000540301 DNAJC5GQ8N7S2 189 aa12.2□□□□□ -0.46
KLHL42-203ENST00000540301 EXOC5O00471 708 aa12.19□□□□□ -0.46
KLHL42-203ENST00000540301 ADCY9O60503 1353 aa12.18□□□□□ -0.46
KLHL42-203ENST00000540301 TNS4Q8IZW8 715 aa12.18□□□□□ -0.46
KLHL42-203ENST00000540301 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
KLHL42-203ENST00000540301 ACSBG1Q96GR2 724 aa12.18□□□□□ -0.46
KLHL42-203ENST00000540301 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
KLHL42-203ENST00000540301 ADGRB1O14514 1584 aa12.18□□□□□ -0.46
KLHL42-203ENST00000540301 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
KLHL42-203ENST00000540301 WDR17Q8IZU2 1322 aa12.17□□□□□ -0.46
KLHL42-203ENST00000540301 KIF3CO14782 793 aa12.17□□□□□ -0.46
KLHL42-203ENST00000540301 LRRC4BQ9NT99 713 aa12.17□□□□□ -0.46
KLHL42-203ENST00000540301 PNPLA7Q6ZV29 1317 aa12.16□□□□□ -0.46
KLHL42-203ENST00000540301 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
KLHL42-203ENST00000540301 CDK19Q9BWU1 502 aa12.16□□□□□ -0.46
KLHL42-203ENST00000540301 CCDC61Q9Y6R9 512 aa12.16□□□□□ -0.46
KLHL42-203ENST00000540301 NHSQ6T4R5 1651 aa12.16□□□□□ -0.46
KLHL42-203ENST00000540301 AXIN2Q9Y2T1 843 aa12.15□□□□□ -0.46
KLHL42-203ENST00000540301 BRD4O60885 1362 aaPredicted RBP12.15□□□□□ -0.46
KLHL42-203ENST00000540301 SLC34A2O95436 690 aa12.14□□□□□ -0.47
KLHL42-203ENST00000540301 CSB-PGBD3P0DP91 1061 aa12.14□□□□□ -0.47
KLHL42-203ENST00000540301 PPARGC1BQ86YN6 1023 aaKnown RBP12.14□□□□□ -0.47
KLHL42-203ENST00000540301 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
KLHL42-203ENST00000540301 CARD10Q9BWT7 1032 aa12.14□□□□□ -0.47
KLHL42-203ENST00000540301 TFCP2L1Q9NZI6 479 aa12.14□□□□□ -0.47
KLHL42-203ENST00000540301 QSER1Q2KHR3 1735 aa12.14□□□□□ -0.47
KLHL42-203ENST00000540301 USP6P35125 1406 aa12.13□□□□□ -0.47
KLHL42-203ENST00000540301 NLRP6P59044 892 aa12.12□□□□□ -0.47
KLHL42-203ENST00000540301 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
KLHL42-203ENST00000540301 COL18A1P39060 1754 aa12.12□□□□□ -0.47
KLHL42-203ENST00000540301 TNS2Q63HR2 1409 aa12.11□□□□□ -0.47
KLHL42-203ENST00000540301 BTAF1O14981 1849 aa12.11□□□□□ -0.47
KLHL42-203ENST00000540301 KAT6BQ8WYB5 2073 aa12.11□□□□□ -0.47
KLHL42-203ENST00000540301 TOMM70O94826 608 aa12.11□□□□□ -0.47
KLHL42-203ENST00000540301 JMYQ8N9B5 988 aa12.1□□□□□ -0.47
KLHL42-203ENST00000540301 KLRG1Q96E93 195 aa12.1□□□□□ -0.47
KLHL42-203ENST00000540301 CD2APQ9Y5K6 639 aa12.1□□□□□ -0.47
KLHL42-203ENST00000540301 ARHGEF28Q8N1W1 1705 aaKnown RBP12.1□□□□□ -0.47
KLHL42-203ENST00000540301 CCDC7Q96M83 1385 aa12.09□□□□□ -0.47
KLHL42-203ENST00000540301 MAPK8IP2Q13387 824 aaPredicted RBP12.09□□□□□ -0.47
KLHL42-203ENST00000540301 SLIT3O75094 1523 aa12.09□□□□□ -0.47
KLHL42-203ENST00000540301 PPIP5K1Q6PFW1 1433 aa12.08□□□□□ -0.48
KLHL42-203ENST00000540301 TUBGCP6Q96RT7 1819 aa12.07□□□□□ -0.48
KLHL42-203ENST00000540301 KCNQ4P56696 695 aa12.07□□□□□ -0.48
KLHL42-203ENST00000540301 CPSF1Q10570 1443 aaKnown RBP12.07□□□□□ -0.48
KLHL42-203ENST00000540301 ARHGEF25Q86VW2 580 aa12.07□□□□□ -0.48
KLHL42-203ENST00000540301 KDM2AQ9Y2K7 1162 aa12.07□□□□□ -0.48
KLHL42-203ENST00000540301 RGPD5Q99666 1765 aa12.07□□□□□ -0.48
KLHL42-203ENST00000540301 ABCC6O95255 1503 aa12.06□□□□□ -0.48
KLHL42-203ENST00000540301 WDR90Q96KV7 1748 aa12.06□□□□□ -0.48
KLHL42-203ENST00000540301 HTRA3P83110 453 aa12.06□□□□□ -0.48
KLHL42-203ENST00000540301 MSL1Q68DK7 614 aa12.06□□□□□ -0.48
KLHL42-203ENST00000540301 COL23A1Q86Y22 540 aaPredicted RBP12.06□□□□□ -0.48
KLHL42-203ENST00000540301 TRPM1Q7Z4N2 1603 aa12.06□□□□□ -0.48
KLHL42-203ENST00000540301 WWC3Q9ULE0 1092 aa12.05□□□□□ -0.48
KLHL42-203ENST00000540301 SOX12O15370 315 aa12.04□□□□□ -0.48
KLHL42-203ENST00000540301 IL2RBP14784 551 aa12.04□□□□□ -0.48
KLHL42-203ENST00000540301 SRPK2P78362 688 aaKnown RBP12.04□□□□□ -0.48
KLHL42-203ENST00000540301 KCNH5Q8NCM2 988 aa12.04□□□□□ -0.48
KLHL42-203ENST00000540301 DCAF11Q8TEB1 546 aa12.03□□□□□ -0.48
KLHL42-203ENST00000540301 IGSF1Q8N6C5 1336 aa12.03□□□□□ -0.48
KLHL42-203ENST00000540301 RBM46Q8TBY0 533 aaKnown RBP12.02□□□□□ -0.49
KLHL42-203ENST00000540301 PCDH10Q9P2E7 1040 aa12.02□□□□□ -0.49
KLHL42-203ENST00000540301 SYTL4Q96C24 671 aaPredicted RBP12.01□□□□□ -0.49
KLHL42-203ENST00000540301 CABP2Q9NPB3 220 aa12.01□□□□□ -0.49
KLHL42-203ENST00000540301 NMRK2Q9NPI5 230 aa12.01□□□□□ -0.49
KLHL42-203ENST00000540301 NLRP2Q9NX02 1062 aa12.01□□□□□ -0.49
KLHL42-203ENST00000540301 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
KLHL42-203ENST00000540301 CCNL1Q9UK58 526 aaPredicted RBP12□□□□□ -0.49
KLHL42-203ENST00000540301 PIK3C2AO00443 1686 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 251 ms