RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 ARHGAP23Q9P227 1491 aa7.49□□□□□ -1.21
PTPRD-214ENST00000540109 PHF23Q9BUL5 403 aaPredicted RBP7.49□□□□□ -1.21
PTPRD-214ENST00000540109 HTATSF1O43719 755 aaKnown RBP7.49□□□□□ -1.21
PTPRD-214ENST00000540109 DHX8Q14562 1220 aaKnown RBP7.49□□□□□ -1.21
PTPRD-214ENST00000540109 FBXO31Q5XUX0 539 aaPredicted RBP7.49□□□□□ -1.21
PTPRD-214ENST00000540109 PNPLA6Q8IY17 1366 aa7.49□□□□□ -1.21
PTPRD-214ENST00000540109 TPM3P06753 285 aa7.49□□□□□ -1.21
PTPRD-214ENST00000540109 HMGN5P82970 282 aaKnown RBP7.49□□□□□ -1.21
PTPRD-214ENST00000540109 CDK19Q9BWU1 502 aa7.49□□□□□ -1.21
PTPRD-214ENST00000540109 PTCH1Q13635 1447 aa7.49□□□□□ -1.21
PTPRD-214ENST00000540109 CDK12Q9NYV4 1490 aaPredicted RBP7.49□□□□□ -1.21
PTPRD-214ENST00000540109 LRRC7Q96NW7 1537 aa7.49□□□□□ -1.21
PTPRD-214ENST00000540109 COL3A1P02461 1466 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-214ENST00000540109 ITSN1Q15811 1721 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 LMOD3Q0VAK6 560 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 NOM1Q5C9Z4 860 aaKnown RBP7.48□□□□□ -1.21
PTPRD-214ENST00000540109 CPSF1Q10570 1443 aaKnown RBP7.48□□□□□ -1.21
PTPRD-214ENST00000540109 RIMS1Q86UR5 1692 aaKnown RBP7.48□□□□□ -1.21
PTPRD-214ENST00000540109 MON2Q7Z3U7 1717 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 WASLO00401 505 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-214ENST00000540109 APAF1O14727 1248 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 SETQ01105 290 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-214ENST00000540109 CABP2Q9NPB3 220 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 CD163L1Q9NR16 1453 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 PHF14O94880 888 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 TNNT1P13805 278 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 FRAT2O75474 233 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-214ENST00000540109 MTHFSP49914 203 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 STK26Q9P289 416 aa7.48□□□□□ -1.21
PTPRD-214ENST00000540109 MINK1Q8N4C8 1332 aaPredicted RBP7.48□□□□□ -1.21
PTPRD-214ENST00000540109 KIAA1211Q6ZU35 1233 aa7.47□□□□□ -1.21
PTPRD-214ENST00000540109 PDCL2Q8N4E4 241 aa7.47□□□□□ -1.21
PTPRD-214ENST00000540109 DIAPH1O60610 1272 aaKnown RBP7.47□□□□□ -1.21
PTPRD-214ENST00000540109 FCHSD2O94868 740 aa7.47□□□□□ -1.21
PTPRD-214ENST00000540109 CAVIN1Q6NZI2 390 aaKnown RBP7.47□□□□□ -1.21
PTPRD-214ENST00000540109 THEMISQ8N1K5 641 aaPredicted RBP7.47□□□□□ -1.21
PTPRD-214ENST00000540109 FER1L4A9Z1Z3 1794 aa7.47□□□□□ -1.21
PTPRD-214ENST00000540109 AKAP12Q02952 1782 aa7.47□□□□□ -1.21
PTPRD-214ENST00000540109 GPS2Q13227 327 aa7.46□□□□□ -1.21
PTPRD-214ENST00000540109 PDCL3Q9H2J4 239 aa7.46□□□□□ -1.21
PTPRD-214ENST00000540109 PPIP5K1Q6PFW1 1433 aa7.46□□□□□ -1.21
PTPRD-214ENST00000540109 CDCA7LQ96GN5 454 aa7.46□□□□□ -1.21
PTPRD-214ENST00000540109 CGNQ9P2M7 1197 aaKnown RBP7.46□□□□□ -1.21
PTPRD-214ENST00000540109 ANKARQ7Z5J8 1434 aa7.46□□□□□ -1.22
PTPRD-214ENST00000540109 BRD2P25440 801 aaKnown RBP7.46□□□□□ -1.22
PTPRD-214ENST00000540109 FOXD4L1Q9NU39 408 aa7.46□□□□□ -1.22
PTPRD-214ENST00000540109 TBX22Q9Y458 520 aa7.46□□□□□ -1.22
PTPRD-214ENST00000540109 CCDC61Q9Y6R9 512 aa7.46□□□□□ -1.22
PTPRD-214ENST00000540109 TOPAZ1Q8N9V7 1692 aa7.46□□□□□ -1.22
PTPRD-214ENST00000540109 U2AF1L5P0DN76 240 aaPredicted RBP7.46□□□□□ -1.22
PTPRD-214ENST00000540109 U2AF1Q01081 240 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTPRD-214ENST00000540109 TCP11L2Q8N4U5 519 aa7.46□□□□□ -1.22
PTPRD-214ENST00000540109 EXOC6Q8TAG9 804 aa7.45□□□□□ -1.22
PTPRD-214ENST00000540109 TTC21AQ8NDW8 1320 aa7.45□□□□□ -1.22
PTPRD-214ENST00000540109 FYB1O15117 783 aa7.45□□□□□ -1.22
PTPRD-214ENST00000540109 IRX3P78415 501 aaPredicted RBP7.45□□□□□ -1.22
PTPRD-214ENST00000540109 PMFBP1Q8TBY8 1022 aa7.45□□□□□ -1.22
PTPRD-214ENST00000540109 ADAMTS13Q76LX8 1427 aa7.45□□□□□ -1.22
PTPRD-214ENST00000540109 KIF24Q5T7B8 1368 aa7.44□□□□□ -1.22
PTPRD-214ENST00000540109 MRE11P49959 708 aa7.44□□□□□ -1.22
PTPRD-214ENST00000540109 OS9Q13438 667 aaPredicted RBP7.44□□□□□ -1.22
PTPRD-214ENST00000540109 C3P01024 1663 aa7.44□□□□□ -1.22
PTPRD-214ENST00000540109 MLECQ14165 292 aa7.44□□□□□ -1.22
PTPRD-214ENST00000540109 NUTM2DQ5VT03 806 aaPredicted RBP7.44□□□□□ -1.22
PTPRD-214ENST00000540109 COG3Q96JB2 828 aa7.44□□□□□ -1.22
PTPRD-214ENST00000540109 ZRSR1Q15695 479 aaKnown RBP7.44□□□□□ -1.22
PTPRD-214ENST00000540109 TEX35Q5T0J7 233 aa7.44□□□□□ -1.22
PTPRD-214ENST00000540109 CWC15Q9P013 229 aaKnown RBP7.44□□□□□ -1.22
PTPRD-214ENST00000540109 NRKQ7Z2Y5 1582 aa7.44□□□□□ -1.22
PTPRD-214ENST00000540109 IPO8O15397 1037 aaKnown RBP7.43□□□□□ -1.22
PTPRD-214ENST00000540109 CCDC146Q8IYE0 955 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 CRBNQ96SW2 442 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 PLEKHG3A1L390 1219 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 CABP1Q9NZU7 370 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 CCDC9Q9Y3X0 531 aaKnown RBP7.43□□□□□ -1.22
PTPRD-214ENST00000540109 UQCRHLA0A096LP55 91 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 UQCRHP07919 91 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 CBX1P83916 185 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 KIF16BQ96L93 1317 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 ZNF142P52746 1687 aaPredicted RBP7.43□□□□□ -1.22
PTPRD-214ENST00000540109 NUDT16Q96DE0 195 aaKnown RBP7.43□□□□□ -1.22
PTPRD-214ENST00000540109 METP08581 1390 aa7.43□□□□□ -1.22
PTPRD-214ENST00000540109 TTC21BQ7Z4L5 1316 aa7.42□□□□□ -1.22
PTPRD-214ENST00000540109 CHMP4CQ96CF2 233 aa7.42□□□□□ -1.22
PTPRD-214ENST00000540109 ALDH1L2Q3SY69 923 aa7.42□□□□□ -1.22
PTPRD-214ENST00000540109 TRERF1Q96PN7 1200 aa7.42□□□□□ -1.22
PTPRD-214ENST00000540109 DIAPH3Q9NSV4 1193 aa7.42□□□□□ -1.22
PTPRD-214ENST00000540109 KDM2BQ8NHM5 1336 aa7.42□□□□□ -1.22
PTPRD-214ENST00000540109 XRN1Q8IZH2 1706 aaKnown RBP7.41□□□□□ -1.22
PTPRD-214ENST00000540109 SAFB2Q14151 953 aaKnown RBP eCLIP7.41□□□□□ -1.22
PTPRD-214ENST00000540109 ERICH4A6NGS2 130 aa7.41□□□□□ -1.22
PTPRD-214ENST00000540109 BRPF1P55201 1214 aaPredicted RBP7.41□□□□□ -1.22
PTPRD-214ENST00000540109 GGNBP2Q9H3C7 697 aa7.41□□□□□ -1.22
PTPRD-214ENST00000540109 USP54Q70EL1 1684 aa7.41□□□□□ -1.22
PTPRD-214ENST00000540109 TMPOP42166 694 aaKnown RBP7.41□□□□□ -1.22
PTPRD-214ENST00000540109 CEP170BQ9Y4F5 1589 aaPredicted RBP7.41□□□□□ -1.22
PTPRD-214ENST00000540109 USP8P40818 1118 aa7.41□□□□□ -1.22
PTPRD-214ENST00000540109 ZKSCAN2Q63HK3 967 aa7.41□□□□□ -1.22
PTPRD-214ENST00000540109 TXNDC2Q86VQ3 553 aa7.41□□□□□ -1.22
PTPRD-214ENST00000540109 U2SURPO15042 1029 aaKnown RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms