RNA–Protein interactions for RNA: ENST00000539814.5

LDHA-217, Transcript of lactate dehydrogenase A, humanhuman

TSL 4

Gene LDHA, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-217ENST00000539814 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
LDHA-217ENST00000539814 XRN1Q8IZH2 1706 aaKnown RBP11.19□□□□□ -0.62
LDHA-217ENST00000539814 NUTM2FA1L443 756 aa11.19□□□□□ -0.62
LDHA-217ENST00000539814 IRF6O14896 467 aa11.19□□□□□ -0.62
LDHA-217ENST00000539814 C14orf93Q9H972 538 aaKnown RBP11.19□□□□□ -0.62
LDHA-217ENST00000539814 STK26Q9P289 416 aa11.19□□□□□ -0.62
LDHA-217ENST00000539814 NWD1Q149M9 1564 aa11.19□□□□□ -0.62
LDHA-217ENST00000539814 KIAA1210Q9ULL0 1709 aa11.18□□□□□ -0.62
LDHA-217ENST00000539814 TBX22Q9Y458 520 aa11.18□□□□□ -0.62
LDHA-217ENST00000539814 LTBP4Q8N2S1 1624 aa11.17□□□□□ -0.62
LDHA-217ENST00000539814 KIF3CO14782 793 aa11.17□□□□□ -0.62
LDHA-217ENST00000539814 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
LDHA-217ENST00000539814 KCNA6P17658 529 aa11.17□□□□□ -0.62
LDHA-217ENST00000539814 C2orf72A6NCS6 295 aa11.16□□□□□ -0.62
LDHA-217ENST00000539814 GRXCR2A6NFK2 248 aa11.16□□□□□ -0.62
LDHA-217ENST00000539814 TMC2Q8TDI7 906 aa11.16□□□□□ -0.62
LDHA-217ENST00000539814 AMOTL2Q9Y2J4 779 aa11.16□□□□□ -0.62
LDHA-217ENST00000539814 RALGAPBQ86X10 1494 aa11.16□□□□□ -0.62
LDHA-217ENST00000539814 YTHDC2Q9H6S0 1430 aaKnown RBP11.16□□□□□ -0.62
LDHA-217ENST00000539814 XIRP1Q702N8 1843 aaKnown RBP11.16□□□□□ -0.62
LDHA-217ENST00000539814 ROCK2O75116 1388 aaKnown RBP11.16□□□□□ -0.62
LDHA-217ENST00000539814 ROBO2Q9HCK4 1378 aa11.16□□□□□ -0.62
LDHA-217ENST00000539814 PDIA4P13667 645 aaKnown RBP11.15□□□□□ -0.62
LDHA-217ENST00000539814 GOPCQ9HD26 462 aa11.15□□□□□ -0.62
LDHA-217ENST00000539814 KNDC1Q76NI1 1749 aa11.15□□□□□ -0.63
LDHA-217ENST00000539814 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.63
LDHA-217ENST00000539814 PLEKHH1Q9ULM0 1364 aa11.15□□□□□ -0.63
LDHA-217ENST00000539814 GNPATO15228 680 aa11.14□□□□□ -0.63
LDHA-217ENST00000539814 TTLL12Q14166 644 aaPredicted RBP11.14□□□□□ -0.63
LDHA-217ENST00000539814 TRAK1Q9UPV9 953 aa11.14□□□□□ -0.63
LDHA-217ENST00000539814 LRPPRCP42704 1394 aaKnown RBP11.14□□□□□ -0.63
LDHA-217ENST00000539814 SAFB2Q14151 953 aaKnown RBP eCLIP11.13□□□□□ -0.63
LDHA-217ENST00000539814 WAPLQ7Z5K2 1190 aa11.13□□□□□ -0.63
LDHA-217ENST00000539814 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
LDHA-217ENST00000539814 STAC3Q96MF2 364 aa11.13□□□□□ -0.63
LDHA-217ENST00000539814 CPS1P31327 1500 aa11.13□□□□□ -0.63
LDHA-217ENST00000539814 LRRC7Q96NW7 1537 aa11.13□□□□□ -0.63
LDHA-217ENST00000539814 PIK3R4Q99570 1358 aa11.13□□□□□ -0.63
LDHA-217ENST00000539814 NALCNQ8IZF0 1738 aa11.12□□□□□ -0.63
LDHA-217ENST00000539814 A6NJR5 290 aa11.12□□□□□ -0.63
LDHA-217ENST00000539814 FOXK1P85037 733 aa11.12□□□□□ -0.63
LDHA-217ENST00000539814 NKTRP30414 1462 aaKnown RBP11.12□□□□□ -0.63
LDHA-217ENST00000539814 ZBTB7CA1YPR0 619 aa11.11□□□□□ -0.63
LDHA-217ENST00000539814 PROSER2Q86WR7 435 aaPredicted RBP11.11□□□□□ -0.63
LDHA-217ENST00000539814 CLUAP1Q96AJ1 413 aa11.11□□□□□ -0.63
LDHA-217ENST00000539814 CARD11Q9BXL7 1154 aa11.11□□□□□ -0.63
LDHA-217ENST00000539814 TMEM94Q12767 1356 aa11.11□□□□□ -0.63
LDHA-217ENST00000539814 TECPR2O15040 1411 aa11.1□□□□□ -0.63
LDHA-217ENST00000539814 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.1□□□□□ -0.63
LDHA-217ENST00000539814 TRAK2O60296 914 aa11.1□□□□□ -0.63
LDHA-217ENST00000539814 HIC1Q14526 733 aa11.1□□□□□ -0.63
LDHA-217ENST00000539814 PCMTD1Q96MG8 357 aaPredicted RBP11.1□□□□□ -0.63
LDHA-217ENST00000539814 PRAM1Q96QH2 718 aa11.1□□□□□ -0.63
LDHA-217ENST00000539814 ABCC11Q96J66 1382 aa11.1□□□□□ -0.63
LDHA-217ENST00000539814 QRICH2Q9H0J4 1663 aa11.1□□□□□ -0.63
LDHA-217ENST00000539814 PTCH1Q13635 1447 aa11.09□□□□□ -0.63
LDHA-217ENST00000539814 GPRASP1Q5JY77 1395 aa11.09□□□□□ -0.63
LDHA-217ENST00000539814 SNPHO15079 494 aa11.09□□□□□ -0.63
LDHA-217ENST00000539814 FCHSD2O94868 740 aa11.09□□□□□ -0.63
LDHA-217ENST00000539814 FECHP22830 423 aa11.09□□□□□ -0.63
LDHA-217ENST00000539814 DLC1Q96QB1 1528 aa11.09□□□□□ -0.63
LDHA-217ENST00000539814 OSBPP22059 807 aa11.08□□□□□ -0.64
LDHA-217ENST00000539814 HOXB3P14651 431 aaPredicted RBP11.07□□□□□ -0.64
LDHA-217ENST00000539814 PLPP6Q8IY26 295 aa11.07□□□□□ -0.64
LDHA-217ENST00000539814 HIRIP3Q9BW71 556 aaPredicted RBP11.07□□□□□ -0.64
LDHA-217ENST00000539814 POGKQ9P215 609 aa11.07□□□□□ -0.64
LDHA-217ENST00000539814 USP47Q96K76 1375 aa11.06□□□□□ -0.64
LDHA-217ENST00000539814 MAP3K9P80192 1104 aa11.06□□□□□ -0.64
LDHA-217ENST00000539814 GIGYF2Q6Y7W6 1299 aaKnown RBP11.06□□□□□ -0.64
LDHA-217ENST00000539814 CERKQ8TCT0 537 aa11.06□□□□□ -0.64
LDHA-217ENST00000539814 CCDC9Q9Y3X0 531 aaKnown RBP11.06□□□□□ -0.64
LDHA-217ENST00000539814 MS4A1P11836 297 aa11.05□□□□□ -0.64
LDHA-217ENST00000539814 MCM6Q14566 821 aa11.05□□□□□ -0.64
LDHA-217ENST00000539814 FAM135BQ49AJ0 1406 aa11.05□□□□□ -0.64
LDHA-217ENST00000539814 ADGRL3Q9HAR2 1447 aa11.05□□□□□ -0.64
LDHA-217ENST00000539814 DOK7Q18PE1 504 aa11.04□□□□□ -0.64
LDHA-217ENST00000539814 CENPJQ9HC77 1338 aaPredicted RBP11.04□□□□□ -0.64
LDHA-217ENST00000539814 FAM163AQ96GL9 167 aaPredicted RBP11.03□□□□□ -0.64
LDHA-217ENST00000539814 TULP4Q9NRJ4 1543 aa11.03□□□□□ -0.64
LDHA-217ENST00000539814 ADGRB2O60241 1585 aa11.03□□□□□ -0.64
LDHA-217ENST00000539814 MSH6P52701 1360 aa11.03□□□□□ -0.64
LDHA-217ENST00000539814 EIF3AQ14152 1382 aaKnown RBP11.03□□□□□ -0.64
LDHA-217ENST00000539814 FMN2Q9NZ56 1722 aa11.02□□□□□ -0.65
LDHA-217ENST00000539814 ST20-MTHFSA0A0A6YYL1 179 aa11.02□□□□□ -0.65
LDHA-217ENST00000539814 HSPA5P11021 654 aaKnown RBP11.02□□□□□ -0.65
LDHA-217ENST00000539814 RGPD8O14715 1765 aaPredicted RBP11.02□□□□□ -0.65
LDHA-217ENST00000539814 CDC42BPGQ6DT37 1551 aa11.02□□□□□ -0.65
LDHA-217ENST00000539814 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
LDHA-217ENST00000539814 NECTIN2Q92692 538 aa11.01□□□□□ -0.65
LDHA-217ENST00000539814 SIRT1Q96EB6 747 aa11.01□□□□□ -0.65
LDHA-217ENST00000539814 USP32Q8NFA0 1604 aa11.01□□□□□ -0.65
LDHA-217ENST00000539814 DDX12PQ92771 950 aa11□□□□□ -0.65
LDHA-217ENST00000539814 UBAP1LF5GYI3 381 aa10.99□□□□□ -0.65
LDHA-217ENST00000539814 ST18O60284 1047 aa10.99□□□□□ -0.65
LDHA-217ENST00000539814 ZEB1P37275 1124 aaPredicted RBP10.99□□□□□ -0.65
LDHA-217ENST00000539814 PIP4K2BP78356 416 aa10.99□□□□□ -0.65
LDHA-217ENST00000539814 SH3D19Q5HYK7 790 aa10.99□□□□□ -0.65
LDHA-217ENST00000539814 UPF1Q92900 1129 aaKnown RBP eCLIP10.99□□□□□ -0.65
LDHA-217ENST00000539814 TESK2Q96S53 571 aa10.99□□□□□ -0.65
LDHA-217ENST00000539814 C19orf44Q9H6X5 657 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms