RNA–Protein interactions for RNA: ENST00000539680.1

ECHDC2-222, Transcript of enoyl-CoA hydratase domain containing 2, human

Gene ECHDC2, Length 5,817 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-222	ENST00000539680	CTNNA3	Q9UI47	895 aa		10.67	□□□□□ -0.7
ECHDC2-222	ENST00000539680	CCDC192	P0DO97	292 aa		10.67	□□□□□ -0.7
ECHDC2-222	ENST00000539680	PPFIBP1	Q86W92	1011 aa		10.67	□□□□□ -0.7
ECHDC2-222	ENST00000539680	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.67	□□□□□ -0.7
ECHDC2-222	ENST00000539680	C9orf84	Q5VXU9	1444 aa		10.67	□□□□□ -0.7
ECHDC2-222	ENST00000539680	MTHFS	P49914	203 aa		10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	ATAD2	Q6PL18	1390 aa		10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	KRT32	Q14532	448 aa		10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	RBM42	Q9BTD8	480 aa	Known RBP	10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	NCAPD3	P42695	1498 aa		10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	LEKR1	Q6ZMV7	388 aa		10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	TCP11L2	Q8N4U5	519 aa		10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	ZNF428	Q96B54	188 aa		10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	TRIM21	P19474	475 aa	Known RBP	10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	PRKAR2B	P31323	418 aa		10.66	□□□□□ -0.7
ECHDC2-222	ENST00000539680	ERBIN	Q96RT1	1412 aa		10.65	□□□□□ -0.7
ECHDC2-222	ENST00000539680	SF3B2	Q13435	895 aa	Known RBP	10.65	□□□□□ -0.7
ECHDC2-222	ENST00000539680	KLHL34	Q8N239	644 aa		10.65	□□□□□ -0.7
ECHDC2-222	ENST00000539680	CEP131	Q9UPN4	1083 aa		10.65	□□□□□ -0.7
ECHDC2-222	ENST00000539680	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.65	□□□□□ -0.7
ECHDC2-222	ENST00000539680	TRAK2	O60296	914 aa		10.65	□□□□□ -0.7
ECHDC2-222	ENST00000539680	NOB1	Q9ULX3	412 aa	Known RBP	10.65	□□□□□ -0.7
ECHDC2-222	ENST00000539680	ADAMTS8	Q9UP79	889 aa		10.65	□□□□□ -0.7
ECHDC2-222	ENST00000539680	ERLIN1	O75477	346 aa		10.65	□□□□□ -0.71
ECHDC2-222	ENST00000539680	NFKBIB	Q15653	356 aa		10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PDZRN3	Q9UPQ7	1066 aa		10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680		H0YHG0	523 aa		10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	TXNDC2	Q86VQ3	553 aa		10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PROSER2	Q86WR7	435 aa	Predicted RBP	10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	NEK4	P51957	841 aa		10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	SERPINC1	P01008	464 aa		10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PKNOX2	Q96KN3	472 aa		10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PRG4	Q92954	1404 aa	Predicted RBP	10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	EXOSC9	Q06265	439 aa	Known RBP	10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	SLC52A1	Q9NWF4	448 aa		10.64	□□□□□ -0.71
ECHDC2-222	ENST00000539680	CCDC181	Q5TID7	509 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	BMP2K	Q9NSY1	1161 aa	Predicted RBP	10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	CCDC141	Q6ZP82	1450 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	GOLGA6L7	A0A1B0GV03	622 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	SMTNL1	A8MU46	457 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	TNMD	Q9H2S6	317 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	EIF3J	O75822	258 aa	Known RBP	10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	SEPT7	Q16181	437 aa	Known RBP	10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	CDK19	Q9BWU1	502 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	DEF6	Q9H4E7	631 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	CFAP45	Q9UL16	551 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	POLA1	P09884	1462 aa	Predicted RBP	10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680		K7ELQ4	463 aa	Predicted RBP	10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	KRT85	P78386	507 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	HDGFL1	Q5TGJ6	251 aa		10.63	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PRAM1	Q96QH2	718 aa		10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	ANKRD30B	Q9BXX2	1392 aa		10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	ZNF287	Q9HBT7	754 aa		10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	VSIG10	Q8N0Z9	540 aa		10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	AQR	O60306	1485 aa	Known RBP eCLIP	10.62	□□□□□ -0.71	3e-6	■■■■□ 20.3
ECHDC2-222	ENST00000539680	PDCL3	Q9H2J4	239 aa		10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PRPF40A	O75400	957 aa	Known RBP	10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	NUTM2G	Q5VZR2	741 aa		10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	CIZ1	Q9ULV3	898 aa	Predicted RBP	10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PPP6R1	Q9UPN7	881 aa		10.62	□□□□□ -0.71
ECHDC2-222	ENST00000539680	SLC4A2	P04920	1241 aa		10.61	□□□□□ -0.71
ECHDC2-222	ENST00000539680	JAKMIP3	Q5VZ66	844 aa		10.61	□□□□□ -0.71
ECHDC2-222	ENST00000539680	MTMR7	Q9Y216	660 aa		10.61	□□□□□ -0.71
ECHDC2-222	ENST00000539680	GBP2	P32456	591 aa	Predicted RBP	10.61	□□□□□ -0.71
ECHDC2-222	ENST00000539680	MPHOSPH8	Q99549	860 aa		10.61	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PDRG1	Q9NUG6	133 aa		10.61	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PLEKHH1	Q9ULM0	1364 aa		10.61	□□□□□ -0.71
ECHDC2-222	ENST00000539680	POTEJ	P0CG39	1038 aa		10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	TTLL5	Q6EMB2	1281 aa		10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	CEP57L1	Q8IYX8	460 aa		10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	TMEM132E	Q6IEE7	984 aa		10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	RAB11FIP3	O75154	756 aa		10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	MVP	Q14764	893 aa	Known RBP	10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	TANGO6	Q9C0B7	1094 aa		10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	ZNF644	Q9H582	1327 aa	Predicted RBP	10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	TNIP1	Q15025	636 aa		10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	FBXO3	Q9UK99	471 aa		10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	TRO	Q12816	1431 aa	Predicted RBP	10.6	□□□□□ -0.71
ECHDC2-222	ENST00000539680	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PAF1	Q8N7H5	531 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	UBAC1	Q9BSL1	405 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PHF23	Q9BUL5	403 aa	Predicted RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	PHAX	Q9H814	394 aa	Known RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	AKAP2	Q9Y2D5	859 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	KIAA0754	O94854	1291 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	EZR	P15311	586 aa	Known RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	IGHMBP2	P38935	993 aa	Known RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	AXDND1	Q5T1B0	1012 aa	Predicted RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	TOM1L2	Q6ZVM7	507 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	MPHOSPH10	O00566	681 aa	Known RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	BRPF1	P55201	1214 aa	Predicted RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	RPAP2	Q8IXW5	612 aa	Predicted RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	KCNH5	Q8NCM2	988 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	ZNF397	Q8NF99	534 aa	Predicted RBP	10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	NEFH	P12036	1026 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	ME1	P48163	572 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	CHD1L	Q86WJ1	897 aa		10.59	□□□□□ -0.71
ECHDC2-222	ENST00000539680	CFAP70	Q5T0N1	1121 aa		10.58	□□□□□ -0.72
ECHDC2-222	ENST00000539680	BLOC1S2	Q6QNY1	142 aa		10.58	□□□□□ -0.72

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