RNA–Protein interactions for RNA: ENST00000539484.1

CCDC144NL-203, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 751 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-203ENST00000539484 ORAI2Q96SN7 254 aa13.44□□□□□ -0.26
CCDC144NL-203ENST00000539484 CCDC144AA2RUR9 1427 aa13.44□□□□□ -0.26
CCDC144NL-203ENST00000539484 HRO43593 1189 aa13.43□□□□□ -0.26
CCDC144NL-203ENST00000539484 RGL3Q3MIN7 710 aa13.43□□□□□ -0.26
CCDC144NL-203ENST00000539484 KCTD12Q96CX2 325 aaKnown RBP13.42□□□□□ -0.26
CCDC144NL-203ENST00000539484 STAC3Q96MF2 364 aa13.42□□□□□ -0.26
CCDC144NL-203ENST00000539484 SOS2Q07890 1332 aaPredicted RBP13.41□□□□□ -0.26
CCDC144NL-203ENST00000539484 NPHP3Q7Z494 1330 aa13.41□□□□□ -0.26
CCDC144NL-203ENST00000539484 PRAG1Q86YV5 1406 aa13.41□□□□□ -0.26
CCDC144NL-203ENST00000539484 ESCO1Q5FWF5 840 aa13.41□□□□□ -0.26
CCDC144NL-203ENST00000539484 DMRTA1Q5VZB9 504 aa13.41□□□□□ -0.26
CCDC144NL-203ENST00000539484 IFT172Q9UG01 1749 aa13.4□□□□□ -0.26
CCDC144NL-203ENST00000539484 MARF1Q9Y4F3 1742 aaKnown RBP13.4□□□□□ -0.26
CCDC144NL-203ENST00000539484 PSEN2P49810 448 aa13.4□□□□□ -0.26
CCDC144NL-203ENST00000539484 STK26Q9P289 416 aa13.4□□□□□ -0.26
CCDC144NL-203ENST00000539484 USP21Q9UK80 565 aa13.4□□□□□ -0.26
CCDC144NL-203ENST00000539484 ANKRD30BQ9BXX2 1392 aa13.4□□□□□ -0.26
CCDC144NL-203ENST00000539484 CDC42BPGQ6DT37 1551 aa13.4□□□□□ -0.26
CCDC144NL-203ENST00000539484 TRPC5Q9UL62 973 aaPredicted RBP13.39□□□□□ -0.27
CCDC144NL-203ENST00000539484 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
CCDC144NL-203ENST00000539484 KNDC1Q76NI1 1749 aa13.39□□□□□ -0.27
CCDC144NL-203ENST00000539484 RGS12O14924 1447 aa13.39□□□□□ -0.27
CCDC144NL-203ENST00000539484 ACIN1Q9UKV3 1341 aaKnown RBP13.39□□□□□ -0.27
CCDC144NL-203ENST00000539484 STK25O00506 426 aa13.38□□□□□ -0.27
CCDC144NL-203ENST00000539484 MPHOSPH9Q99550 1183 aa13.38□□□□□ -0.27
CCDC144NL-203ENST00000539484 COL22A1Q8NFW1 1626 aaPredicted RBP13.38□□□□□ -0.27
CCDC144NL-203ENST00000539484 ADGRF5Q8IZF2 1346 aa13.38□□□□□ -0.27
CCDC144NL-203ENST00000539484 NUTM2FA1L443 756 aa13.37□□□□□ -0.27
CCDC144NL-203ENST00000539484 FOXO3O43524 673 aa13.36□□□□□ -0.27
CCDC144NL-203ENST00000539484 WAPLQ7Z5K2 1190 aa13.35□□□□□ -0.27
CCDC144NL-203ENST00000539484 RGPD8O14715 1765 aaPredicted RBP13.35□□□□□ -0.27
CCDC144NL-203ENST00000539484 KIF1AQ12756 1690 aa13.34□□□□□ -0.27
CCDC144NL-203ENST00000539484 ATAD2Q6PL18 1390 aa13.34□□□□□ -0.27
CCDC144NL-203ENST00000539484 FMN2Q9NZ56 1722 aa13.34□□□□□ -0.27
CCDC144NL-203ENST00000539484 TECPR2O15040 1411 aa13.34□□□□□ -0.27
CCDC144NL-203ENST00000539484 SPATA31E1Q6ZUB1 1445 aa13.34□□□□□ -0.27
CCDC144NL-203ENST00000539484 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
CCDC144NL-203ENST00000539484 TMEM132EQ6IEE7 984 aa13.34□□□□□ -0.27
CCDC144NL-203ENST00000539484 ABCC11Q96J66 1382 aa13.33□□□□□ -0.27
CCDC144NL-203ENST00000539484 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.28
CCDC144NL-203ENST00000539484 FNBP4Q8N3X1 1017 aaPredicted RBP13.33□□□□□ -0.28
CCDC144NL-203ENST00000539484 PIK3C2GO75747 1445 aa13.32□□□□□ -0.28
CCDC144NL-203ENST00000539484 MYOM2P54296 1465 aa13.32□□□□□ -0.28
CCDC144NL-203ENST00000539484 PXDNQ92626 1479 aa13.32□□□□□ -0.28
CCDC144NL-203ENST00000539484 PTCD2Q8WV60 388 aaKnown RBP13.32□□□□□ -0.28
CCDC144NL-203ENST00000539484 DHX57Q6P158 1386 aaKnown RBP13.32□□□□□ -0.28
CCDC144NL-203ENST00000539484 YTHDC2Q9H6S0 1430 aaKnown RBP13.31□□□□□ -0.28
CCDC144NL-203ENST00000539484 PPP4R3BQ5MIZ7 849 aa13.31□□□□□ -0.28
CCDC144NL-203ENST00000539484 ATRNO75882 1429 aa13.3□□□□□ -0.28
CCDC144NL-203ENST00000539484 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.3□□□□□ -0.28
CCDC144NL-203ENST00000539484 RGS20O76081 388 aa13.3□□□□□ -0.28
CCDC144NL-203ENST00000539484 PSME1Q06323 249 aa13.3□□□□□ -0.28
CCDC144NL-203ENST00000539484 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
CCDC144NL-203ENST00000539484 KRT28Q7Z3Y7 464 aa13.29□□□□□ -0.28
CCDC144NL-203ENST00000539484 PTPN5P54829 565 aa13.28□□□□□ -0.28
CCDC144NL-203ENST00000539484 SIRT1Q96EB6 747 aa13.28□□□□□ -0.28
CCDC144NL-203ENST00000539484 IRX2Q9BZI1 471 aaPredicted RBP13.28□□□□□ -0.28
CCDC144NL-203ENST00000539484 SAFB2Q14151 953 aaKnown RBP eCLIP13.27□□□□□ -0.29
CCDC144NL-203ENST00000539484 LMOD2Q6P5Q4 547 aa13.27□□□□□ -0.29
CCDC144NL-203ENST00000539484 GJD4Q96KN9 370 aaPredicted RBP13.27□□□□□ -0.29
CCDC144NL-203ENST00000539484 C14orf93Q9H972 538 aaKnown RBP13.27□□□□□ -0.29
CCDC144NL-203ENST00000539484 POGKQ9P215 609 aa13.27□□□□□ -0.29
CCDC144NL-203ENST00000539484 SPATA31A3Q5VYP0 1347 aa13.27□□□□□ -0.29
CCDC144NL-203ENST00000539484 CFAP70Q5T0N1 1121 aa13.26□□□□□ -0.29
CCDC144NL-203ENST00000539484 BCL9LQ86UU0 1499 aa13.26□□□□□ -0.29
CCDC144NL-203ENST00000539484 CCDC125Q86Z20 511 aa13.26□□□□□ -0.29
CCDC144NL-203ENST00000539484 UNC5CLQ8IV45 518 aa13.26□□□□□ -0.29
CCDC144NL-203ENST00000539484 USP32Q8NFA0 1604 aa13.25□□□□□ -0.29
CCDC144NL-203ENST00000539484 TNS3Q68CZ2 1445 aa13.24□□□□□ -0.29
CCDC144NL-203ENST00000539484 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
CCDC144NL-203ENST00000539484 KCNK17Q96T54 332 aa13.24□□□□□ -0.29
CCDC144NL-203ENST00000539484 CCDC9Q9Y3X0 531 aaKnown RBP13.24□□□□□ -0.29
CCDC144NL-203ENST00000539484 BRWD3Q6RI45 1802 aa13.24□□□□□ -0.29
CCDC144NL-203ENST00000539484 NWD2Q9ULI1 1742 aa13.23□□□□□ -0.29
CCDC144NL-203ENST00000539484 TBC1D12O60347 775 aa13.23□□□□□ -0.29
CCDC144NL-203ENST00000539484 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
CCDC144NL-203ENST00000539484 ARHGEF10O15013 1369 aa13.22□□□□□ -0.29
CCDC144NL-203ENST00000539484 PLCH1Q4KWH8 1693 aa13.22□□□□□ -0.29
CCDC144NL-203ENST00000539484 PPP1R37O75864 691 aa13.22□□□□□ -0.29
CCDC144NL-203ENST00000539484 SF3B2Q13435 895 aaKnown RBP13.22□□□□□ -0.29
CCDC144NL-203ENST00000539484 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
CCDC144NL-203ENST00000539484 SLIT2O94813 1529 aa13.22□□□□□ -0.29
CCDC144NL-203ENST00000539484 DLC1Q96QB1 1528 aa13.22□□□□□ -0.29
CCDC144NL-203ENST00000539484 SBNO1A3KN83 1393 aa13.21□□□□□ -0.29
CCDC144NL-203ENST00000539484 RAB3GAP2Q9H2M9 1393 aa13.21□□□□□ -0.29
CCDC144NL-203ENST00000539484 PMFBP1Q8TBY8 1022 aa13.21□□□□□ -0.29
CCDC144NL-203ENST00000539484 KDM2AQ9Y2K7 1162 aa13.21□□□□□ -0.29
CCDC144NL-203ENST00000539484 ABCA3Q99758 1704 aa13.21□□□□□ -0.3
CCDC144NL-203ENST00000539484 RALGAPBQ86X10 1494 aa13.21□□□□□ -0.3
CCDC144NL-203ENST00000539484 EIF3AQ14152 1382 aaKnown RBP13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 GLI3P10071 1580 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 A0A0G2JS52 829 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 MYT1Q01538 1121 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 PLPP6Q8IY26 295 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 CABLES1Q8TDN4 633 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 ANKARQ7Z5J8 1434 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
CCDC144NL-203ENST00000539484 FOXK1P85037 733 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms