RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 NUTM1Q86Y26 1132 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 PBXIP1Q96AQ6 731 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 ARMC5Q96C12 935 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 THAP11Q96EK4 314 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 KIAA1024Q9UPX6 916 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 ESPNB1AK53 854 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 GIPC1O14908 333 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 RPLP1P05386 114 aaKnown RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 NEFLP07196 543 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 FAM69CQ0P6D2 419 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 KCNMA1Q12791 1236 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 PPARGC1BQ86YN6 1023 aaKnown RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 C1QTNF2Q9BXJ5 285 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 TFIP11Q9UBB9 837 aaKnown RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 LOC105371045A0A1W2PR82 267 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 F12P00748 615 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 TAGLNQ01995 201 aaKnown RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 PTK2Q05397 1052 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 C4orf48Q5BLP8 95 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 PTCRAQ6ISU1 281 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 ZFRQ96KR1 1074 aaKnown RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 PURBQ96QR8 312 aaKnown RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 PPP1R12CQ9BZL4 782 aa1.88□□□□□ -2.11
HIF1A-204ENST00000539097 ATP1B4Q9UN42 357 aaPredicted RBP1.88□□□□□ -2.11
HIF1A-204ENST00000539097 UNCXA6NJT0 531 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 IGSF3O75054 1194 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 HIRAP54198 1017 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 MTMR2Q13614 643 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 LBRQ14739 615 aaKnown RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 MORN1Q5T089 497 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 HELBQ8NG08 1087 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 CLP1Q92989 425 aaKnown RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 CALR3Q96L12 384 aaKnown RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 TSR3Q9UJK0 312 aaKnown RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 DXOO77932 396 aaKnown RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 FMNL1O95466 1100 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 WDR44Q5JSH3 913 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 KANK4Q5T7N3 995 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 BRICD5Q6PL45 260 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 FAM160A2Q8N612 972 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 GMCL1Q96IK5 515 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 C8orf37Q96NL8 207 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 WBP1LQ9NX94 342 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 MAFBQ9Y5Q3 323 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 NUTM2BA6NNL0 878 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 NUTM2EB1AL46 878 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 ATP5J2-PTCD1G3V325 749 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 C6orf229H3BNL8 230 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 DKK1O94907 266 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 HIF1AQ16665 826 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 PLA2G2CQ5R387 149 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 NUTM2DQ5VT03 806 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 NUTM2AQ8IVF1 878 aaPredicted RBP1.87□□□□□ -2.11
HIF1A-204ENST00000539097 CRIPAKQ8N1N5 446 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 PHTF2Q8N3S3 785 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 ZNF516Q92618 1163 aa1.87□□□□□ -2.11
HIF1A-204ENST00000539097 FAM196BA6NMK8 535 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 LSM11P83369 360 aaKnown RBP eCLIP1.86□□□□□ -2.11
HIF1A-204ENST00000539097 INSM1Q01101 510 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-204ENST00000539097 NBPF14Q5TI25 921 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 TMEM164Q5U3C3 297 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 CACTIN-AS1Q8N1I8 211 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 LARGE2Q8N3Y3 721 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 NKX2-3Q8TAU0 364 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 ZBTB7CA1YPR0 619 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 WNT7BP56706 349 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 CLDN10P78369 228 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 MTMR3Q13615 1198 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 LCE2CQ5TA81 110 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 KRTAP19-1Q8IUB9 90 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 SIX5Q8N196 739 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 KLRG1Q96E93 195 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 GZF1Q9H116 711 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-204ENST00000539097 SOWAHBA6NEL2 793 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 PTCD1O75127 700 aaKnown RBP1.86□□□□□ -2.11
HIF1A-204ENST00000539097 PDIA4P13667 645 aaKnown RBP1.86□□□□□ -2.11
HIF1A-204ENST00000539097 LMOD1P29536 600 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-204ENST00000539097 ATP1A2P50993 1020 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 SCUBE3Q8IX30 993 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 EMID1Q96A84 441 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-204ENST00000539097 CCDC97Q96F63 343 aaPredicted RBP1.86□□□□□ -2.11
HIF1A-204ENST00000539097 ZFYVE1Q9HBF4 777 aa1.86□□□□□ -2.11
HIF1A-204ENST00000539097 ATP9BO43861 1147 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 SERPINB4P48594 390 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 FAM26DQ5JW98 314 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 CCDC9Q9Y3X0 531 aaKnown RBP1.85□□□□□ -2.11
HIF1A-204ENST00000539097 COPS2P61201 443 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 ECM1Q16610 540 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 C1orf53Q5VUE5 145 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 ADGRD1Q6QNK2 874 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 RNF19AQ9NV58 838 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 GPC1P35052 558 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 SCTRP47872 440 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 CDK15Q96Q40 435 aa1.85□□□□□ -2.11
HIF1A-204ENST00000539097 RBM47A0AV96 593 aaKnown RBP1.84□□□□□ -2.11
HIF1A-204ENST00000539097 FOXO3O43524 673 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 DHX9Q08211 1270 aaKnown RBP1.84□□□□□ -2.11
HIF1A-204ENST00000539097 TXNDC2Q86VQ3 553 aa1.84□□□□□ -2.11
HIF1A-204ENST00000539097 ALKBH8Q96BT7 664 aaKnown RBP1.84□□□□□ -2.11
HIF1A-204ENST00000539097 EVA1BQ9NVM1 165 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms