RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-222ENST00000538689 CCDC9Q9Y3X0 531 aaKnown RBP9.28□□□□□ -0.92
FDFT1-222ENST00000538689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.27□□□□□ -0.931e-7■■■□□ 15.7
FDFT1-222ENST00000538689 PLEKHG3A1L390 1219 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 AKAP12Q02952 1782 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 MON2Q7Z3U7 1717 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 PNPLA6Q8IY17 1366 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.26□□□□□ -0.93
FDFT1-222ENST00000538689 SEMA3EO15041 775 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 GOLGA2Q08379 1002 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 RUNDC1Q96C34 613 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 ZFP91Q96JP5 570 aaPredicted RBP9.26□□□□□ -0.93
FDFT1-222ENST00000538689 RCAN3Q9UKA8 241 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 TOPAZ1Q8N9V7 1692 aa9.26□□□□□ -0.93
FDFT1-222ENST00000538689 ABCB7O75027 752 aa9.25□□□□□ -0.93
FDFT1-222ENST00000538689 ITSN1Q15811 1721 aa9.25□□□□□ -0.93
FDFT1-222ENST00000538689 COL3A1P02461 1466 aaPredicted RBP9.25□□□□□ -0.93
FDFT1-222ENST00000538689 PPP4R2Q9NY27 417 aa9.25□□□□□ -0.93
FDFT1-222ENST00000538689 ZBTB7CA1YPR0 619 aa9.24□□□□□ -0.93
FDFT1-222ENST00000538689 DUSP27Q5VZP5 1158 aa9.24□□□□□ -0.93
FDFT1-222ENST00000538689 TRMT2AQ8IZ69 625 aaKnown RBP9.24□□□□□ -0.93
FDFT1-222ENST00000538689 IL27Q8NEV9 243 aa9.24□□□□□ -0.93
FDFT1-222ENST00000538689 ZMYND10O75800 440 aa9.24□□□□□ -0.93
FDFT1-222ENST00000538689 NME9Q86XW9 330 aa9.24□□□□□ -0.93
FDFT1-222ENST00000538689 RGPD8O14715 1765 aaPredicted RBP9.23□□□□□ -0.93
FDFT1-222ENST00000538689 AATKQ6ZMQ8 1374 aa9.23□□□□□ -0.93
FDFT1-222ENST00000538689 ACEP12821 1306 aa9.23□□□□□ -0.93
FDFT1-222ENST00000538689 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
FDFT1-222ENST00000538689 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.935e-31■□□□□ 8.6
FDFT1-222ENST00000538689 SLFN5Q08AF3 891 aa9.23□□□□□ -0.93
FDFT1-222ENST00000538689 DCAF8Q5TAQ9 597 aa9.23□□□□□ -0.93
FDFT1-222ENST00000538689 POLKQ9UBT6 870 aa9.23□□□□□ -0.93
FDFT1-222ENST00000538689 IQSEC2Q5JU85 1478 aa9.23□□□□□ -0.93
FDFT1-222ENST00000538689 MAP2P11137 1827 aaKnown RBP9.23□□□□□ -0.93
FDFT1-222ENST00000538689 NUTM2FA1L443 756 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 RRP1P56182 461 aaKnown RBP9.22□□□□□ -0.93
FDFT1-222ENST00000538689 WWC1Q8IX03 1113 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 TCP11L2Q8N4U5 519 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 COG3Q96JB2 828 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 ADGRL3Q9HAR2 1447 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 DIAPH1O60610 1272 aaKnown RBP9.22□□□□□ -0.93
FDFT1-222ENST00000538689 NUBP1P53384 320 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 CCDC27Q2M243 656 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 USP6P35125 1406 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 TTC21BQ7Z4L5 1316 aa9.22□□□□□ -0.93
FDFT1-222ENST00000538689 NRKQ7Z2Y5 1582 aa9.21□□□□□ -0.93
FDFT1-222ENST00000538689 SPDYE2BA6NHP3 402 aa9.21□□□□□ -0.93
FDFT1-222ENST00000538689 E9PSI1 815 aa9.21□□□□□ -0.93
FDFT1-222ENST00000538689 SPDYE6P0CI01 402 aa9.21□□□□□ -0.93
FDFT1-222ENST00000538689 PDIA4P13667 645 aaKnown RBP9.21□□□□□ -0.93
FDFT1-222ENST00000538689 SPDYE2Q495Y8 402 aa9.21□□□□□ -0.93
FDFT1-222ENST00000538689 NECTIN2Q92692 538 aa9.21□□□□□ -0.93
FDFT1-222ENST00000538689 ANKARQ7Z5J8 1434 aa9.21□□□□□ -0.93
FDFT1-222ENST00000538689 PLEKHF1Q96S99 279 aa9.21□□□□□ -0.94
FDFT1-222ENST00000538689 SSH2Q76I76 1423 aa9.21□□□□□ -0.94
FDFT1-222ENST00000538689 TESPA1A2RU30 521 aaPredicted RBP9.2□□□□□ -0.94
FDFT1-222ENST00000538689 APBB1O00213 710 aa9.2□□□□□ -0.94
FDFT1-222ENST00000538689 U2SURPO15042 1029 aaKnown RBP9.2□□□□□ -0.94
FDFT1-222ENST00000538689 FBLN1P23142 703 aa9.2□□□□□ -0.94
FDFT1-222ENST00000538689 C19orf44Q9H6X5 657 aa9.2□□□□□ -0.94
FDFT1-222ENST00000538689 ZRANB1Q9UGI0 708 aa9.2□□□□□ -0.94
FDFT1-222ENST00000538689 MSH6P52701 1360 aa9.2□□□□□ -0.94
FDFT1-222ENST00000538689 WDR63Q8IWG1 891 aa9.2□□□□□ -0.94
FDFT1-222ENST00000538689 ARHGEF1Q92888 912 aaKnown RBP9.2□□□□□ -0.94
FDFT1-222ENST00000538689 PNNQ9H307 717 aaKnown RBP9.2□□□□□ -0.94
FDFT1-222ENST00000538689 TTC21AQ8NDW8 1320 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 CDK12Q9NYV4 1490 aaPredicted RBP9.19□□□□□ -0.94
FDFT1-222ENST00000538689 FMN2Q9NZ56 1722 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 NCOA3Q9Y6Q9 1424 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 UBAP1LF5GYI3 381 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 FCHSD2O94868 740 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 PIP4K2BP78356 416 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 EMILIN1Q9Y6C2 1016 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 OVOS2A0A0J9YW53 1432 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 MST1RQ04912 1400 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 OVOS2Q6IE36 1432 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 PPM1GO15355 546 aaPredicted RBP9.19□□□□□ -0.94
FDFT1-222ENST00000538689 PMFBP1Q8TBY8 1022 aa9.19□□□□□ -0.94
FDFT1-222ENST00000538689 RRP7AQ9Y3A4 280 aaKnown RBP9.19□□□□□ -0.94
FDFT1-222ENST00000538689 NGDNQ8NEJ9 315 aaKnown RBP9.18□□□□□ -0.94
FDFT1-222ENST00000538689 ROBO1Q9Y6N7 1651 aa9.18□□□□□ -0.94
FDFT1-222ENST00000538689 DDX17Q92841 729 aaKnown RBP9.17□□□□□ -0.94
FDFT1-222ENST00000538689 ORAI2Q96SN7 254 aa9.17□□□□□ -0.94
FDFT1-222ENST00000538689 USP31Q70CQ4 1352 aa9.17□□□□□ -0.94
FDFT1-222ENST00000538689 IL13P35225 146 aa9.17□□□□□ -0.94
FDFT1-222ENST00000538689 TMPOP42166 694 aaKnown RBP9.17□□□□□ -0.94
FDFT1-222ENST00000538689 RRS1Q15050 365 aaKnown RBP9.17□□□□□ -0.94
FDFT1-222ENST00000538689 SLAIN2Q9P270 581 aa9.17□□□□□ -0.94
FDFT1-222ENST00000538689 MAPK8IP3Q9UPT6 1336 aa9.17□□□□□ -0.94
FDFT1-222ENST00000538689 ATF3P18847 181 aa9.16□□□□□ -0.94
FDFT1-222ENST00000538689 MKRN3Q13064 507 aaKnown RBP9.16□□□□□ -0.94
FDFT1-222ENST00000538689 B4GALNT3Q6L9W6 998 aa9.16□□□□□ -0.94
FDFT1-222ENST00000538689 DCCP43146 1447 aa9.16□□□□□ -0.94
FDFT1-222ENST00000538689 C1orf167Q5SNV9 1468 aa9.16□□□□□ -0.94
FDFT1-222ENST00000538689 TOM1O60784 492 aa9.15□□□□□ -0.94
FDFT1-222ENST00000538689 PLIN1O60240 522 aa9.15□□□□□ -0.95
FDFT1-222ENST00000538689 BRINP3Q76B58 766 aa9.15□□□□□ -0.95
FDFT1-222ENST00000538689 KDM4CQ9H3R0 1056 aa9.15□□□□□ -0.95
FDFT1-222ENST00000538689 TRIM35Q9UPQ4 493 aa9.15□□□□□ -0.95
FDFT1-222ENST00000538689 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.14□□□□□ -0.95
FDFT1-222ENST00000538689 SGIP1Q9BQI5 828 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms