RNA–Protein interactions for RNA: ENST00000538446.5

CDK2AP1-204, Transcript of cyclin dependent kinase 2 associated protein 1, humanhuman

TSL 5 BASIC

Gene CDK2AP1, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP1-204ENST00000538446 USP21Q9UK80 565 aa17.23■□□□□ 0.35
CDK2AP1-204ENST00000538446 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
CDK2AP1-204ENST00000538446 ANP32CO43423 234 aa17.22■□□□□ 0.35
CDK2AP1-204ENST00000538446 EVA1CP58658 441 aa17.22■□□□□ 0.35
CDK2AP1-204ENST00000538446 UNC5CLQ8IV45 518 aa17.22■□□□□ 0.35
CDK2AP1-204ENST00000538446 PRKRIP1Q9H875 184 aaPredicted RBP17.22■□□□□ 0.35
CDK2AP1-204ENST00000538446 AXIN2Q9Y2T1 843 aa17.22■□□□□ 0.35
CDK2AP1-204ENST00000538446 SMG6Q86US8 1419 aaKnown RBP17.21■□□□□ 0.35
CDK2AP1-204ENST00000538446 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
CDK2AP1-204ENST00000538446 MTHFSP49914 203 aa17.21■□□□□ 0.35
CDK2AP1-204ENST00000538446 ZNF772Q68DY9 489 aaPredicted RBP17.21■□□□□ 0.35
CDK2AP1-204ENST00000538446 STRN4Q9NRL3 753 aa17.21■□□□□ 0.35
CDK2AP1-204ENST00000538446 BCL9LQ86UU0 1499 aa17.2■□□□□ 0.34
CDK2AP1-204ENST00000538446 CSB-PGBD3P0DP91 1061 aa17.2■□□□□ 0.34
CDK2AP1-204ENST00000538446 CAMTA1Q9Y6Y1 1673 aa17.2■□□□□ 0.34
CDK2AP1-204ENST00000538446 INSRP06213 1382 aa17.19■□□□□ 0.34
CDK2AP1-204ENST00000538446 HSP90AB2PQ58FF8 381 aa17.19■□□□□ 0.34
CDK2AP1-204ENST00000538446 LMO7Q8WWI1 1683 aa17.19■□□□□ 0.34
CDK2AP1-204ENST00000538446 ERBB3P21860 1342 aa17.19■□□□□ 0.34
CDK2AP1-204ENST00000538446 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
CDK2AP1-204ENST00000538446 COL5A2P05997 1499 aaPredicted RBP17.18■□□□□ 0.34
CDK2AP1-204ENST00000538446 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
CDK2AP1-204ENST00000538446 ANKRD24Q8TF21 1146 aa17.18■□□□□ 0.34
CDK2AP1-204ENST00000538446 LTV1Q96GA3 475 aaPredicted RBP17.18■□□□□ 0.34
CDK2AP1-204ENST00000538446 PLCH1Q4KWH8 1693 aa17.17■□□□□ 0.34
CDK2AP1-204ENST00000538446 CFAP53Q96M91 514 aa17.17■□□□□ 0.34
CDK2AP1-204ENST00000538446 TRPC5Q9UL62 973 aaPredicted RBP17.17■□□□□ 0.34
CDK2AP1-204ENST00000538446 CCDC9Q9Y3X0 531 aaKnown RBP17.17■□□□□ 0.34
CDK2AP1-204ENST00000538446 WDR17Q8IZU2 1322 aa17.17■□□□□ 0.34
CDK2AP1-204ENST00000538446 LTN1O94822 1766 aa17.16■□□□□ 0.34
CDK2AP1-204ENST00000538446 VPS72Q15906 364 aa17.16■□□□□ 0.34
CDK2AP1-204ENST00000538446 DIEXFQ68CQ4 756 aaKnown RBP17.16■□□□□ 0.34
CDK2AP1-204ENST00000538446 LARP1Q6PKG0 1096 aaKnown RBP17.16■□□□□ 0.34
CDK2AP1-204ENST00000538446 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
CDK2AP1-204ENST00000538446 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
CDK2AP1-204ENST00000538446 COL18A1P39060 1754 aa17.15■□□□□ 0.34
CDK2AP1-204ENST00000538446 QTRT2Q9H974 415 aaKnown RBP17.15■□□□□ 0.34
CDK2AP1-204ENST00000538446 NWD2Q9ULI1 1742 aa17.15■□□□□ 0.34
CDK2AP1-204ENST00000538446 NLRP2Q9NX02 1062 aa17.14■□□□□ 0.33
CDK2AP1-204ENST00000538446 RGS17Q9UGC6 210 aaPredicted RBP17.14■□□□□ 0.33
CDK2AP1-204ENST00000538446 ATRNO75882 1429 aa17.13■□□□□ 0.33
CDK2AP1-204ENST00000538446 CRB1P82279 1406 aa17.13■□□□□ 0.33
CDK2AP1-204ENST00000538446 EIF4A2Q14240 407 aaKnown RBP17.13■□□□□ 0.33
CDK2AP1-204ENST00000538446 DIAPH1O60610 1272 aaKnown RBP17.12■□□□□ 0.33
CDK2AP1-204ENST00000538446 USP35Q9P2H5 1018 aa17.12■□□□□ 0.33
CDK2AP1-204ENST00000538446 SPATA31A5Q5VU36 1347 aa17.12■□□□□ 0.33
CDK2AP1-204ENST00000538446 SPATA31A7Q8IWB4 1347 aa17.12■□□□□ 0.33
CDK2AP1-204ENST00000538446 NRAPQ86VF7 1730 aa17.12■□□□□ 0.33
CDK2AP1-204ENST00000538446 GJD4Q96KN9 370 aaPredicted RBP17.11■□□□□ 0.33
CDK2AP1-204ENST00000538446 CARD10Q9BWT7 1032 aa17.11■□□□□ 0.33
CDK2AP1-204ENST00000538446 SPATA31A1Q5TZJ5 1347 aa17.11■□□□□ 0.33
CDK2AP1-204ENST00000538446 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.1■□□□□ 0.33
CDK2AP1-204ENST00000538446 TCP11L2Q8N4U5 519 aa17.1■□□□□ 0.33
CDK2AP1-204ENST00000538446 MAP2P11137 1827 aaKnown RBP17.1■□□□□ 0.33
CDK2AP1-204ENST00000538446 IL13P35225 146 aa17.09■□□□□ 0.33
CDK2AP1-204ENST00000538446 RBM6P78332 1123 aaKnown RBP17.09■□□□□ 0.33
CDK2AP1-204ENST00000538446 NBPF6Q5VWK0 638 aa17.09■□□□□ 0.33
CDK2AP1-204ENST00000538446 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
CDK2AP1-204ENST00000538446 NBPF4Q96M43 638 aa17.09■□□□□ 0.33
CDK2AP1-204ENST00000538446 NUDCQ9Y266 331 aa17.09■□□□□ 0.33
CDK2AP1-204ENST00000538446 COL3A1P02461 1466 aaPredicted RBP17.08■□□□□ 0.32
CDK2AP1-204ENST00000538446 RXRBP28702 533 aa17.08■□□□□ 0.32
CDK2AP1-204ENST00000538446 EYA1Q99502 592 aa17.08■□□□□ 0.32
CDK2AP1-204ENST00000538446 THRAP3Q9Y2W1 955 aaKnown RBP17.08■□□□□ 0.32
CDK2AP1-204ENST00000538446 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
CDK2AP1-204ENST00000538446 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
CDK2AP1-204ENST00000538446 BARGINQ6ZT62 677 aa17.06■□□□□ 0.32
CDK2AP1-204ENST00000538446 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
CDK2AP1-204ENST00000538446 A0A0G2JS52 829 aa17.05■□□□□ 0.32
CDK2AP1-204ENST00000538446 MYT1Q01538 1121 aa17.05■□□□□ 0.32
CDK2AP1-204ENST00000538446 FAM98CQ17RN3 349 aaKnown RBP17.05■□□□□ 0.32
CDK2AP1-204ENST00000538446 FAM208AQ9UK61 1670 aaKnown RBP17.04■□□□□ 0.32
CDK2AP1-204ENST00000538446 CDCA7Q9BWT1 371 aaPredicted RBP17.04■□□□□ 0.32
CDK2AP1-204ENST00000538446 RGPD5Q99666 1765 aa17.04■□□□□ 0.32
CDK2AP1-204ENST00000538446 IL2RBP14784 551 aa17.03■□□□□ 0.32
CDK2AP1-204ENST00000538446 RAPGEF4Q8WZA2 1011 aa17.03■□□□□ 0.32
CDK2AP1-204ENST00000538446 MRS2Q9HD23 443 aa17.03■□□□□ 0.32
CDK2AP1-204ENST00000538446 GLI3P10071 1580 aa17.02■□□□□ 0.32
CDK2AP1-204ENST00000538446 U2AF1L5P0DN76 240 aaPredicted RBP17.02■□□□□ 0.32
CDK2AP1-204ENST00000538446 U2AF1Q01081 240 aaKnown RBP eCLIP17.02■□□□□ 0.32
CDK2AP1-204ENST00000538446 SULT6B1Q6IMI4 303 aa17.02■□□□□ 0.32
CDK2AP1-204ENST00000538446 NCAPD2Q15021 1401 aa17.02■□□□□ 0.31
CDK2AP1-204ENST00000538446 ONECUT3O60422 494 aaPredicted RBP17.01■□□□□ 0.31
CDK2AP1-204ENST00000538446 WDR43Q15061 677 aaKnown RBP eCLIP17.01■□□□□ 0.31
CDK2AP1-204ENST00000538446 DISP2A7MBM2 1401 aa17■□□□□ 0.31
CDK2AP1-204ENST00000538446 HMOX1P09601 288 aa17■□□□□ 0.31
CDK2AP1-204ENST00000538446 TATP17735 454 aaPredicted RBP17■□□□□ 0.31
CDK2AP1-204ENST00000538446 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
CDK2AP1-204ENST00000538446 SEPT12Q8IYM1 358 aa17■□□□□ 0.31
CDK2AP1-204ENST00000538446 KDRP35968 1356 aa17■□□□□ 0.31
CDK2AP1-204ENST00000538446 CCDC184Q52MB2 194 aa16.99■□□□□ 0.31
CDK2AP1-204ENST00000538446 MIER1Q8N108 512 aa16.98■□□□□ 0.31
CDK2AP1-204ENST00000538446 MEGF6O75095 1541 aa16.97■□□□□ 0.31
CDK2AP1-204ENST00000538446 CCER2I3L3R5 266 aa16.97■□□□□ 0.31
CDK2AP1-204ENST00000538446 FCHSD2O94868 740 aa16.97■□□□□ 0.31
CDK2AP1-204ENST00000538446 DDB1Q16531 1140 aa16.97■□□□□ 0.31
CDK2AP1-204ENST00000538446 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
CDK2AP1-204ENST00000538446 OVOS2A0A0G2JMS6 1433 aa16.96■□□□□ 0.31
CDK2AP1-204ENST00000538446 RGS12O14924 1447 aa16.96■□□□□ 0.31
CDK2AP1-204ENST00000538446 RGPD1P0DJD0 1748 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms