RNA–Protein interactions for RNA: ENST00000538225.5

CLTA-209, Transcript of clathrin light chain A, humanhuman

TSL 2 BASIC

Gene CLTA, Length 1,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-209ENST00000538225 USP35Q9P2H5 1018 aa31.84■■■□□ 2.69
CLTA-209ENST00000538225 SEPT12Q8IYM1 358 aa31.83■■■□□ 2.69
CLTA-209ENST00000538225 COL5A2P05997 1499 aaPredicted RBP31.83■■■□□ 2.69
CLTA-209ENST00000538225 SPATA31A1Q5TZJ5 1347 aa31.82■■■□□ 2.68
CLTA-209ENST00000538225 COL18A1P39060 1754 aa31.82■■■□□ 2.68
CLTA-209ENST00000538225 A0A0G2JS52 829 aa31.82■■■□□ 2.68
CLTA-209ENST00000538225 MYT1Q01538 1121 aa31.82■■■□□ 2.68
CLTA-209ENST00000538225 ONECUT3O60422 494 aaPredicted RBP31.81■■■□□ 2.68
CLTA-209ENST00000538225 FBLN1P23142 703 aa31.81■■■□□ 2.68
CLTA-209ENST00000538225 CGNL1Q0VF96 1302 aa31.77■■■□□ 2.68
CLTA-209ENST00000538225 KIF20BQ96Q89 1820 aa31.77■■■□□ 2.68
CLTA-209ENST00000538225 TOM1L2Q6ZVM7 507 aa31.76■■■□□ 2.67
CLTA-209ENST00000538225 CSB-PGBD3P0DP91 1061 aa31.75■■■□□ 2.67
CLTA-209ENST00000538225 LTN1O94822 1766 aa31.75■■■□□ 2.67
CLTA-209ENST00000538225 RGPD5Q99666 1765 aa31.74■■■□□ 2.67
CLTA-209ENST00000538225 TCP11L2Q8N4U5 519 aa31.73■■■□□ 2.67
CLTA-209ENST00000538225 CRB1P82279 1406 aa31.73■■■□□ 2.67
CLTA-209ENST00000538225 MAP3K19Q56UN5 1328 aa31.73■■■□□ 2.67
CLTA-209ENST00000538225 WDR17Q8IZU2 1322 aa31.73■■■□□ 2.67
CLTA-209ENST00000538225 CCDC7Q96M83 1385 aa31.71■■■□□ 2.67
CLTA-209ENST00000538225 RRS1Q15050 365 aaKnown RBP31.71■■■□□ 2.67
CLTA-209ENST00000538225 WASHC2AQ641Q2 1341 aa31.71■■■□□ 2.67
CLTA-209ENST00000538225 ABCC6O95255 1503 aa31.7■■■□□ 2.67
CLTA-209ENST00000538225 AMPHP49418 695 aa31.7■■■□□ 2.67
CLTA-209ENST00000538225 BARGINQ6ZT62 677 aa31.7■■■□□ 2.67
CLTA-209ENST00000538225 IP6K1Q92551 441 aa31.7■■■□□ 2.67
CLTA-209ENST00000538225 KRT27Q7Z3Y8 459 aa31.69■■■□□ 2.66
CLTA-209ENST00000538225 UPF1Q92900 1129 aaKnown RBP eCLIP31.69■■■□□ 2.66
CLTA-209ENST00000538225 BRWD3Q6RI45 1802 aa31.68■■■□□ 2.66
CLTA-209ENST00000538225 THRAP3Q9Y2W1 955 aaKnown RBP31.68■■■□□ 2.66
CLTA-209ENST00000538225 ANKRD24Q8TF21 1146 aa31.67■■■□□ 2.66
CLTA-209ENST00000538225 KNSTRNQ9Y448 316 aa31.66■■■□□ 2.66
CLTA-209ENST00000538225 HOXC9P31274 260 aa31.65■■■□□ 2.66
CLTA-209ENST00000538225 LTV1Q96GA3 475 aaPredicted RBP31.65■■■□□ 2.66
CLTA-209ENST00000538225 ERBB3P21860 1342 aa31.65■■■□□ 2.66
CLTA-209ENST00000538225 THSD7AQ9UPZ6 1657 aa31.64■■■□□ 2.66
CLTA-209ENST00000538225 CARD10Q9BWT7 1032 aa31.64■■■□□ 2.66
CLTA-209ENST00000538225 NLRP2Q9NX02 1062 aa31.63■■■□□ 2.65
CLTA-209ENST00000538225 BLMP54132 1417 aaPredicted RBP31.63■■■□□ 2.65
CLTA-209ENST00000538225 TNNT2P45379 298 aaPredicted RBP31.61■■■□□ 2.65
CLTA-209ENST00000538225 FAM182BQ5T319 152 aa31.59■■■□□ 2.65
CLTA-209ENST00000538225 EMILIN1Q9Y6C2 1016 aa31.58■■■□□ 2.65
CLTA-209ENST00000538225 RTL1A6NKG5 1358 aa31.57■■■□□ 2.64
CLTA-209ENST00000538225 PPM1GO15355 546 aaPredicted RBP31.57■■■□□ 2.64
CLTA-209ENST00000538225 NSD2O96028 1365 aa31.56■■■□□ 2.64
CLTA-209ENST00000538225 PDE3BQ13370 1112 aa31.56■■■□□ 2.64
CLTA-209ENST00000538225 PER1O15534 1290 aaPredicted RBP31.55■■■□□ 2.64
CLTA-209ENST00000538225 HSP90AB2PQ58FF8 381 aa31.55■■■□□ 2.64
CLTA-209ENST00000538225 MORC1Q86VD1 984 aa31.55■■■□□ 2.64
CLTA-209ENST00000538225 ZEB1P37275 1124 aaPredicted RBP31.54■■■□□ 2.64
CLTA-209ENST00000538225 AMER1Q5JTC6 1135 aaPredicted RBP31.54■■■□□ 2.64
CLTA-209ENST00000538225 ANKRD26Q9UPS8 1709 aa31.54■■■□□ 2.64
CLTA-209ENST00000538225 FLT4P35916 1363 aa31.53■■■□□ 2.64
CLTA-209ENST00000538225 PEAK1Q9H792 1746 aa31.52■■■□□ 2.64
CLTA-209ENST00000538225 CDCA7Q9BWT1 371 aaPredicted RBP31.52■■■□□ 2.64
CLTA-209ENST00000538225 POLKQ9UBT6 870 aa31.52■■■□□ 2.64
CLTA-209ENST00000538225 KIF24Q5T7B8 1368 aa31.51■■■□□ 2.63
CLTA-209ENST00000538225 DDB1Q16531 1140 aa31.5■■■□□ 2.63
CLTA-209ENST00000538225 INSRP06213 1382 aa31.5■■■□□ 2.63
CLTA-209ENST00000538225 CC2D1BQ5T0F9 858 aaKnown RBP31.48■■■□□ 2.63
CLTA-209ENST00000538225 PARP4Q9UKK3 1724 aaKnown RBP31.48■■■□□ 2.63
CLTA-209ENST00000538225 CNGB1Q14028 1251 aaPredicted RBP31.47■■■□□ 2.63
CLTA-209ENST00000538225 CCDC125Q86Z20 511 aa31.47■■■□□ 2.63
CLTA-209ENST00000538225 DISP2A7MBM2 1401 aa31.47■■■□□ 2.63
CLTA-209ENST00000538225 SMG6Q86US8 1419 aaKnown RBP31.47■■■□□ 2.63
CLTA-209ENST00000538225 MAP2P11137 1827 aaKnown RBP31.47■■■□□ 2.63
CLTA-209ENST00000538225 WNK3Q9BYP7 1800 aa31.46■■■□□ 2.63
CLTA-209ENST00000538225 IL2RBP14784 551 aa31.45■■■□□ 2.63
CLTA-209ENST00000538225 EP400Q96L91 3159 aa31.44■■■□□ 2.62
CLTA-209ENST00000538225 EXOC5O00471 708 aa31.44■■■□□ 2.62
CLTA-209ENST00000538225 NBPF6Q5VWK0 638 aa31.44■■■□□ 2.62
CLTA-209ENST00000538225 FAM196AQ6ZSG2 479 aa31.44■■■□□ 2.62
CLTA-209ENST00000538225 NBPF4Q96M43 638 aa31.44■■■□□ 2.62
CLTA-209ENST00000538225 LRRC37A3O60309 1634 aa31.44■■■□□ 2.62
CLTA-209ENST00000538225 FAM208AQ9UK61 1670 aaKnown RBP31.44■■■□□ 2.62
CLTA-209ENST00000538225 USHBP1Q8N6Y0 703 aa31.42■■■□□ 2.62
CLTA-209ENST00000538225 RGPD2P0DJD1 1756 aa31.41■■■□□ 2.62
CLTA-209ENST00000538225 SF3B2Q13435 895 aaKnown RBP31.41■■■□□ 2.62
CLTA-209ENST00000538225 MARCH10Q8NA82 808 aaPredicted RBP31.39■■■□□ 2.62
CLTA-209ENST00000538225 TRIM37O94972 964 aa31.37■■■□□ 2.61
CLTA-209ENST00000538225 NPC1L1Q9UHC9 1359 aa31.35■■■□□ 2.61
CLTA-209ENST00000538225 TNS2Q63HR2 1409 aa31.34■■■□□ 2.61
CLTA-209ENST00000538225 OVOS2A0A0G2JMS6 1433 aa31.33■■■□□ 2.61
CLTA-209ENST00000538225 EIF4A2Q14240 407 aaKnown RBP31.33■■■□□ 2.61
CLTA-209ENST00000538225 DEFB132Q7Z7B7 95 aa31.33■■■□□ 2.61
CLTA-209ENST00000538225 RAPGEF4Q8WZA2 1011 aa31.31■■■□□ 2.6
CLTA-209ENST00000538225 EYA1Q99502 592 aa31.31■■■□□ 2.6
CLTA-209ENST00000538225 MEGF6O75095 1541 aa31.29■■■□□ 2.6
CLTA-209ENST00000538225 MTHFSP49914 203 aa31.29■■■□□ 2.6
CLTA-209ENST00000538225 DDX54Q8TDD1 881 aaKnown RBP31.29■■■□□ 2.6
CLTA-209ENST00000538225 RGPD1P0DJD0 1748 aa31.27■■■□□ 2.6
CLTA-209ENST00000538225 TATP17735 454 aaPredicted RBP31.27■■■□□ 2.6
CLTA-209ENST00000538225 BAG6P46379 1132 aa31.27■■■□□ 2.6
CLTA-209ENST00000538225 ZCRB1Q8TBF4 217 aaKnown RBP31.26■■■□□ 2.59
CLTA-209ENST00000538225 APBA3O96018 575 aa31.24■■■□□ 2.59
CLTA-209ENST00000538225 DDX10Q13206 875 aaKnown RBP31.24■■■□□ 2.59
CLTA-209ENST00000538225 EN1Q05925 392 aaPredicted RBP31.23■■■□□ 2.59
CLTA-209ENST00000538225 TNS1Q9HBL0 1735 aaKnown RBP31.21■■■□□ 2.59
CLTA-209ENST00000538225 PTF1AQ7RTS3 328 aa31.21■■■□□ 2.59
CLTA-209ENST00000538225 BCL9O00512 1426 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms