RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 TRPM1Q7Z4N2 1603 aa12.73□□□□□ -0.37
SMAD3-203ENST00000537194 TTC21BQ7Z4L5 1316 aa12.72□□□□□ -0.37
SMAD3-203ENST00000537194 NUP188Q5SRE5 1749 aa12.72□□□□□ -0.37
SMAD3-203ENST00000537194 EXOC5O00471 708 aa12.72□□□□□ -0.37
SMAD3-203ENST00000537194 KCNQ2O43526 872 aa12.72□□□□□ -0.37
SMAD3-203ENST00000537194 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
SMAD3-203ENST00000537194 SLIT3O75094 1523 aa12.72□□□□□ -0.37
SMAD3-203ENST00000537194 AKAP12Q02952 1782 aa12.71□□□□□ -0.38
SMAD3-203ENST00000537194 KTN1Q86UP2 1357 aaKnown RBP12.7□□□□□ -0.38
SMAD3-203ENST00000537194 SBF2Q86WG5 1849 aa12.7□□□□□ -0.38
SMAD3-203ENST00000537194 ARHGEF25Q86VW2 580 aa12.7□□□□□ -0.38
SMAD3-203ENST00000537194 CARD10Q9BWT7 1032 aa12.7□□□□□ -0.38
SMAD3-203ENST00000537194 CPSF1Q10570 1443 aaKnown RBP12.7□□□□□ -0.38
SMAD3-203ENST00000537194 CCDC7Q96M83 1385 aa12.69□□□□□ -0.38
SMAD3-203ENST00000537194 HDGFL2Q7Z4V5 671 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-203ENST00000537194 PIK3C2AO00443 1686 aa12.69□□□□□ -0.38
SMAD3-203ENST00000537194 RGPD3A6NKT7 1758 aaPredicted RBP12.69□□□□□ -0.38
SMAD3-203ENST00000537194 RGPD4Q7Z3J3 1758 aa12.69□□□□□ -0.38
SMAD3-203ENST00000537194 YY1P25490 414 aa12.68□□□□□ -0.38
SMAD3-203ENST00000537194 SIN3AQ96ST3 1273 aa12.68□□□□□ -0.38
SMAD3-203ENST00000537194 STK32BQ9NY57 414 aa12.68□□□□□ -0.38
SMAD3-203ENST00000537194 AXIN2Q9Y2T1 843 aa12.68□□□□□ -0.38
SMAD3-203ENST00000537194 RGPD5Q99666 1765 aa12.68□□□□□ -0.38
SMAD3-203ENST00000537194 NINLQ9Y2I6 1382 aa12.68□□□□□ -0.38
SMAD3-203ENST00000537194 LRRC37A3O60309 1634 aa12.67□□□□□ -0.38
SMAD3-203ENST00000537194 COL18A1P39060 1754 aa12.67□□□□□ -0.38
SMAD3-203ENST00000537194 TMC1Q8TDI8 760 aa12.67□□□□□ -0.38
SMAD3-203ENST00000537194 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.66□□□□□ -0.38
SMAD3-203ENST00000537194 MARCH10Q8NA82 808 aaPredicted RBP12.66□□□□□ -0.38
SMAD3-203ENST00000537194 CARD11Q9BXL7 1154 aa12.66□□□□□ -0.38
SMAD3-203ENST00000537194 NLRP2Q9NX02 1062 aa12.66□□□□□ -0.38
SMAD3-203ENST00000537194 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
SMAD3-203ENST00000537194 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
SMAD3-203ENST00000537194 BCL9O00512 1426 aa12.65□□□□□ -0.38
SMAD3-203ENST00000537194 TERF2IPQ9NYB0 399 aa12.65□□□□□ -0.38
SMAD3-203ENST00000537194 ABCC6O95255 1503 aa12.65□□□□□ -0.38
SMAD3-203ENST00000537194 SLC24A1O60721 1099 aa12.63□□□□□ -0.39
SMAD3-203ENST00000537194 TXNRD1Q16881 649 aa12.63□□□□□ -0.39
SMAD3-203ENST00000537194 SBNO2Q9Y2G9 1366 aa12.63□□□□□ -0.39
SMAD3-203ENST00000537194 IL2RBP14784 551 aa12.62□□□□□ -0.39
SMAD3-203ENST00000537194 TNS2Q63HR2 1409 aa12.62□□□□□ -0.39
SMAD3-203ENST00000537194 USP31Q70CQ4 1352 aa12.61□□□□□ -0.39
SMAD3-203ENST00000537194 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
SMAD3-203ENST00000537194 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
SMAD3-203ENST00000537194 SLC15A2Q16348 729 aa12.61□□□□□ -0.39
SMAD3-203ENST00000537194 ANO8Q9HCE9 1232 aaPredicted RBP12.61□□□□□ -0.39
SMAD3-203ENST00000537194 MON2Q7Z3U7 1717 aa12.61□□□□□ -0.39
SMAD3-203ENST00000537194 NFAT5O94916 1531 aa12.61□□□□□ -0.39
SMAD3-203ENST00000537194 NME9Q86XW9 330 aa12.6□□□□□ -0.39
SMAD3-203ENST00000537194 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
SMAD3-203ENST00000537194 ATF5Q9Y2D1 282 aaPredicted RBP12.6□□□□□ -0.39
SMAD3-203ENST00000537194 LTN1O94822 1766 aa12.6□□□□□ -0.39
SMAD3-203ENST00000537194 ERBB3P21860 1342 aa12.6□□□□□ -0.39
SMAD3-203ENST00000537194 ACSBG1Q96GR2 724 aa12.59□□□□□ -0.39
SMAD3-203ENST00000537194 PUS7Q96PZ0 661 aaKnown RBP12.59□□□□□ -0.39
SMAD3-203ENST00000537194 MTFR1LQ9H019 292 aa12.59□□□□□ -0.39
SMAD3-203ENST00000537194 EDC4Q6P2E9 1401 aaKnown RBP12.59□□□□□ -0.39
SMAD3-203ENST00000537194 PTF1AQ7RTS3 328 aa12.58□□□□□ -0.4
SMAD3-203ENST00000537194 PROM2Q8N271 834 aa12.58□□□□□ -0.4
SMAD3-203ENST00000537194 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
SMAD3-203ENST00000537194 CASZ1Q86V15 1759 aa12.57□□□□□ -0.4
SMAD3-203ENST00000537194 COG3Q96JB2 828 aa12.57□□□□□ -0.4
SMAD3-203ENST00000537194 LTV1Q96GA3 475 aaPredicted RBP12.56□□□□□ -0.4
SMAD3-203ENST00000537194 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
SMAD3-203ENST00000537194 USP54Q70EL1 1684 aa12.56□□□□□ -0.4
SMAD3-203ENST00000537194 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
SMAD3-203ENST00000537194 AMPHP49418 695 aa12.55□□□□□ -0.4
SMAD3-203ENST00000537194 DDX54Q8TDD1 881 aaKnown RBP12.55□□□□□ -0.4
SMAD3-203ENST00000537194 IP6K1Q92551 441 aa12.55□□□□□ -0.4
SMAD3-203ENST00000537194 POLD1P28340 1107 aa12.54□□□□□ -0.4
SMAD3-203ENST00000537194 SLC27A3Q5K4L6 730 aa12.54□□□□□ -0.4
SMAD3-203ENST00000537194 PDGFDQ9GZP0 370 aaPredicted RBP12.54□□□□□ -0.4
SMAD3-203ENST00000537194 CHD4Q14839 1912 aa12.54□□□□□ -0.4
SMAD3-203ENST00000537194 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
SMAD3-203ENST00000537194 A0A1W2PP64 1363 aa12.54□□□□□ -0.4
SMAD3-203ENST00000537194 BTAF1O14981 1849 aa12.53□□□□□ -0.4
SMAD3-203ENST00000537194 PTGER2P43116 358 aa12.53□□□□□ -0.4
SMAD3-203ENST00000537194 SYTL4Q96C24 671 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-203ENST00000537194 ARXQ96QS3 562 aa12.53□□□□□ -0.4
SMAD3-203ENST00000537194 SYT17Q9BSW7 474 aa12.53□□□□□ -0.4
SMAD3-203ENST00000537194 FHDC1Q9C0D6 1143 aaPredicted RBP12.53□□□□□ -0.4
SMAD3-203ENST00000537194 MYOM1P52179 1685 aa12.52□□□□□ -0.4
SMAD3-203ENST00000537194 SLC16A10Q8TF71 515 aa12.52□□□□□ -0.41
SMAD3-203ENST00000537194 CD163L1Q9NR16 1453 aa12.52□□□□□ -0.41
SMAD3-203ENST00000537194 TFCP2L1Q9NZI6 479 aa12.51□□□□□ -0.41
SMAD3-203ENST00000537194 ST20-MTHFSA0A0A6YYL1 179 aa12.5□□□□□ -0.41
SMAD3-203ENST00000537194 GPR162Q16538 588 aa12.5□□□□□ -0.41
SMAD3-203ENST00000537194 CDCA8Q53HL2 280 aa12.5□□□□□ -0.41
SMAD3-203ENST00000537194 KLHL34Q8N239 644 aa12.5□□□□□ -0.41
SMAD3-203ENST00000537194 ZCRB1Q8TBF4 217 aaKnown RBP12.5□□□□□ -0.41
SMAD3-203ENST00000537194 SMG6Q86US8 1419 aaKnown RBP12.5□□□□□ -0.41
SMAD3-203ENST00000537194 HOXC9P31274 260 aa12.49□□□□□ -0.41
SMAD3-203ENST00000537194 TMF1P82094 1093 aa12.49□□□□□ -0.41
SMAD3-203ENST00000537194 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
SMAD3-203ENST00000537194 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
SMAD3-203ENST00000537194 MAP3K19Q56UN5 1328 aa12.48□□□□□ -0.41
SMAD3-203ENST00000537194 PRIM1P49642 420 aaKnown RBP12.48□□□□□ -0.41
SMAD3-203ENST00000537194 RTL1A6NKG5 1358 aa12.47□□□□□ -0.41
SMAD3-203ENST00000537194 MSH5O43196 834 aa12.47□□□□□ -0.41
SMAD3-203ENST00000537194 ZNF827Q17R98 1081 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms