RNA–Protein interactions for RNA: ENST00000536999.1

CHD4-206, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 318 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-206ENST00000536999 TRMT2AQ8IZ69 625 aaKnown RBP7.38□□□□□ -1.23
CHD4-206ENST00000536999 PNNQ9H307 717 aaKnown RBP7.38□□□□□ -1.23
CHD4-206ENST00000536999 CROCC2H7BZ55 1655 aa7.38□□□□□ -1.23
CHD4-206ENST00000536999 COL22A1Q8NFW1 1626 aaPredicted RBP7.38□□□□□ -1.23
CHD4-206ENST00000536999 C1orf167Q5SNV9 1468 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 DISP2A7MBM2 1401 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 ADGRL3Q9HAR2 1447 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 ZNF521Q96K83 1311 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 CANXP27824 592 aaKnown RBP7.37□□□□□ -1.23
CHD4-206ENST00000536999 VPS72Q15906 364 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 FRAT1Q92837 279 aaPredicted RBP7.37□□□□□ -1.23
CHD4-206ENST00000536999 PUS7Q96PZ0 661 aaKnown RBP7.37□□□□□ -1.23
CHD4-206ENST00000536999 ORAI2Q96SN7 254 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 CIZ1Q9ULV3 898 aaPredicted RBP7.37□□□□□ -1.23
CHD4-206ENST00000536999 KDM2AQ9Y2K7 1162 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 RGPD1P0DJD0 1748 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 SLIT2O94813 1529 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 DUOX2Q9NRD8 1548 aa7.37□□□□□ -1.23
CHD4-206ENST00000536999 PTPRUQ92729 1446 aa7.36□□□□□ -1.23
CHD4-206ENST00000536999 KIF16BQ96L93 1317 aa7.36□□□□□ -1.23
CHD4-206ENST00000536999 ONECUT3O60422 494 aaPredicted RBP7.36□□□□□ -1.23
CHD4-206ENST00000536999 SLC34A2O95436 690 aa7.36□□□□□ -1.23
CHD4-206ENST00000536999 HAP1P54257 671 aaPredicted RBP7.36□□□□□ -1.23
CHD4-206ENST00000536999 C8orf34Q49A92 452 aa7.36□□□□□ -1.23
CHD4-206ENST00000536999 FAM182BQ5T319 152 aa7.36□□□□□ -1.23
CHD4-206ENST00000536999 WDR63Q8IWG1 891 aa7.36□□□□□ -1.23
CHD4-206ENST00000536999 CHMP5Q9NZZ3 219 aa7.36□□□□□ -1.23
CHD4-206ENST00000536999 NOS1P29475 1434 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 ADGRB2O60241 1585 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 GOLGA6L22H0YM25 854 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 FAM98CQ17RN3 349 aaKnown RBP7.35□□□□□ -1.23
CHD4-206ENST00000536999 CCDC27Q2M243 656 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 MTERF4Q7Z6M4 381 aaKnown RBP7.35□□□□□ -1.23
CHD4-206ENST00000536999 CLUAP1Q96AJ1 413 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 GBP4Q96PP9 640 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 CAMKK2Q96RR4 588 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 TESK2Q96S53 571 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 MAP7D2Q96T17 732 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 MYH16Q9H6N6 1097 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 ANO8Q9HCE9 1232 aaPredicted RBP7.35□□□□□ -1.23
CHD4-206ENST00000536999 ADAMTS8Q9UP79 889 aa7.35□□□□□ -1.23
CHD4-206ENST00000536999 MARF1Q9Y4F3 1742 aaKnown RBP7.35□□□□□ -1.23
CHD4-206ENST00000536999 NPHP3Q7Z494 1330 aa7.34□□□□□ -1.23
CHD4-206ENST00000536999 CENPJQ9HC77 1338 aaPredicted RBP7.34□□□□□ -1.23
CHD4-206ENST00000536999 APBA3O96018 575 aa7.34□□□□□ -1.23
CHD4-206ENST00000536999 HSP90AA1P07900 732 aaKnown RBP7.34□□□□□ -1.23
CHD4-206ENST00000536999 PPP2R1AP30153 589 aa7.34□□□□□ -1.23
CHD4-206ENST00000536999 CLCN1P35523 988 aa7.34□□□□□ -1.23
CHD4-206ENST00000536999 TERF1P54274 439 aa7.34□□□□□ -1.23
CHD4-206ENST00000536999 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
CHD4-206ENST00000536999 ZNF428Q96B54 188 aa7.34□□□□□ -1.23
CHD4-206ENST00000536999 TRIM44Q96DX7 344 aaPredicted RBP7.34□□□□□ -1.23
CHD4-206ENST00000536999 CFAP53Q96M91 514 aa7.34□□□□□ -1.23
CHD4-206ENST00000536999 SALL2Q9Y467 1007 aaPredicted RBP7.34□□□□□ -1.23
CHD4-206ENST00000536999 TRIM37O94972 964 aa7.33□□□□□ -1.24
CHD4-206ENST00000536999 TPM2P07951 284 aa7.33□□□□□ -1.24
CHD4-206ENST00000536999 KLHL34Q8N239 644 aa7.33□□□□□ -1.24
CHD4-206ENST00000536999 TRPM1Q7Z4N2 1603 aa7.33□□□□□ -1.24
CHD4-206ENST00000536999 IPO8O15397 1037 aaKnown RBP7.32□□□□□ -1.24
CHD4-206ENST00000536999 CC2D1BQ5T0F9 858 aaKnown RBP7.32□□□□□ -1.24
CHD4-206ENST00000536999 HSCBQ8IWL3 235 aa7.32□□□□□ -1.24
CHD4-206ENST00000536999 CDCA7LQ96GN5 454 aa7.32□□□□□ -1.24
CHD4-206ENST00000536999 CHD4Q14839 1912 aa7.32□□□□□ -1.24
CHD4-206ENST00000536999 POLR3AO14802 1390 aaPredicted RBP7.32□□□□□ -1.24
CHD4-206ENST00000536999 SBNO2Q9Y2G9 1366 aa7.32□□□□□ -1.24
CHD4-206ENST00000536999 LMTK2Q8IWU2 1503 aa7.32□□□□□ -1.24
CHD4-206ENST00000536999 FAM83GA6ND36 823 aa7.31□□□□□ -1.24
CHD4-206ENST00000536999 FRAT2O75474 233 aaPredicted RBP7.31□□□□□ -1.24
CHD4-206ENST00000536999 PLEKHG5O94827 1062 aa7.31□□□□□ -1.24
CHD4-206ENST00000536999 HSPA6P17066 643 aa7.31□□□□□ -1.24
CHD4-206ENST00000536999 HS1BP3Q53T59 392 aa7.31□□□□□ -1.24
CHD4-206ENST00000536999 ESCO1Q5FWF5 840 aa7.31□□□□□ -1.24
CHD4-206ENST00000536999 AMER1Q5JTC6 1135 aaPredicted RBP7.31□□□□□ -1.24
CHD4-206ENST00000536999 XRN1Q8IZH2 1706 aaKnown RBP7.31□□□□□ -1.24
CHD4-206ENST00000536999 TBC1D32Q96NH3 1257 aa7.31□□□□□ -1.24
CHD4-206ENST00000536999 TNS1Q9HBL0 1735 aaKnown RBP7.31□□□□□ -1.24
CHD4-206ENST00000536999 MYO5BQ9ULV0 1848 aa7.31□□□□□ -1.24
CHD4-206ENST00000536999 NALCNQ8IZF0 1738 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 NRKQ7Z2Y5 1582 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 FOXO3O43524 673 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 HSP90AA2PQ14568 343 aaPredicted RBP7.3□□□□□ -1.24
CHD4-206ENST00000536999 SNX21Q969T3 373 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 RUNDC1Q96C34 613 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 PCDH10Q9P2E7 1040 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 BRPF3Q9ULD4 1205 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 NSD2O96028 1365 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 TMEM131LA2VDJ0 1609 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 PXDNQ92626 1479 aa7.3□□□□□ -1.24
CHD4-206ENST00000536999 PLIN1O60240 522 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 MCM4P33991 863 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 RGS3P49796 1198 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 PRELPP51888 382 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 CNGB1Q14028 1251 aaPredicted RBP7.29□□□□□ -1.24
CHD4-206ENST00000536999 GPR162Q16538 588 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 FAM196AQ6ZSG2 479 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 SYT17Q9BSW7 474 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 FHDC1Q9C0D6 1143 aaPredicted RBP7.29□□□□□ -1.24
CHD4-206ENST00000536999 DDX19BQ9UMR2 479 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 USP32Q8NFA0 1604 aa7.29□□□□□ -1.24
CHD4-206ENST00000536999 IQGAP3Q86VI3 1631 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms