RNA–Protein interactions for RNA: ENST00000536144.1

MRE11-206, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 3

Gene MRE11, Length 619 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-206ENST00000536144 TULP4Q9NRJ4 1543 aa12.68□□□□□ -0.38
MRE11-206ENST00000536144 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
MRE11-206ENST00000536144 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
MRE11-206ENST00000536144 PPP1R37O75864 691 aa12.67□□□□□ -0.38
MRE11-206ENST00000536144 SRPK2P78362 688 aaKnown RBP12.67□□□□□ -0.38
MRE11-206ENST00000536144 DDX17Q92841 729 aaKnown RBP12.67□□□□□ -0.38
MRE11-206ENST00000536144 JCADQ9P266 1359 aa12.67□□□□□ -0.38
MRE11-206ENST00000536144 PLEKHG3A1L390 1219 aa12.66□□□□□ -0.38
MRE11-206ENST00000536144 PUS7Q96PZ0 661 aaKnown RBP12.66□□□□□ -0.38
MRE11-206ENST00000536144 TESK2Q96S53 571 aa12.66□□□□□ -0.38
MRE11-206ENST00000536144 USP47Q96K76 1375 aa12.66□□□□□ -0.38
MRE11-206ENST00000536144 ATP7BP35670 1465 aa12.65□□□□□ -0.38
MRE11-206ENST00000536144 PSME1Q06323 249 aa12.65□□□□□ -0.38
MRE11-206ENST00000536144 TMEM121BQ9BXQ6 578 aaPredicted RBP12.65□□□□□ -0.38
MRE11-206ENST00000536144 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.65□□□□□ -0.38
MRE11-206ENST00000536144 COL16A1Q07092 1604 aaPredicted RBP12.65□□□□□ -0.38
MRE11-206ENST00000536144 NHSL1Q5SYE7 1610 aa12.65□□□□□ -0.38
MRE11-206ENST00000536144 USP32Q8NFA0 1604 aa12.64□□□□□ -0.39
MRE11-206ENST00000536144 KRT28Q7Z3Y7 464 aa12.64□□□□□ -0.39
MRE11-206ENST00000536144 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
MRE11-206ENST00000536144 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
MRE11-206ENST00000536144 PHLPP1O60346 1717 aa12.63□□□□□ -0.39
MRE11-206ENST00000536144 NGDNQ8NEJ9 315 aaKnown RBP12.63□□□□□ -0.39
MRE11-206ENST00000536144 POLR3AO14802 1390 aaPredicted RBP12.63□□□□□ -0.39
MRE11-206ENST00000536144 PXDNQ92626 1479 aa12.63□□□□□ -0.39
MRE11-206ENST00000536144 KIF1AQ12756 1690 aa12.63□□□□□ -0.39
MRE11-206ENST00000536144 SPATA31A6Q5VVP1 1343 aa12.62□□□□□ -0.39
MRE11-206ENST00000536144 SBNO1A3KN83 1393 aa12.62□□□□□ -0.39
MRE11-206ENST00000536144 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
MRE11-206ENST00000536144 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
MRE11-206ENST00000536144 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
MRE11-206ENST00000536144 XPCQ01831 940 aaPredicted RBP12.61□□□□□ -0.39
MRE11-206ENST00000536144 CABP1Q9NZU7 370 aa12.61□□□□□ -0.39
MRE11-206ENST00000536144 PPIP5K1Q6PFW1 1433 aa12.61□□□□□ -0.39
MRE11-206ENST00000536144 ACEP12821 1306 aa12.61□□□□□ -0.39
MRE11-206ENST00000536144 SPATA31A3Q5VYP0 1347 aa12.61□□□□□ -0.39
MRE11-206ENST00000536144 PNPLA6Q8IY17 1366 aa12.6□□□□□ -0.39
MRE11-206ENST00000536144 TMF1P82094 1093 aa12.6□□□□□ -0.39
MRE11-206ENST00000536144 CDCA8Q53HL2 280 aa12.59□□□□□ -0.39
MRE11-206ENST00000536144 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
MRE11-206ENST00000536144 RGPD8O14715 1765 aaPredicted RBP12.58□□□□□ -0.4
MRE11-206ENST00000536144 ARHGEF10O15013 1369 aa12.57□□□□□ -0.4
MRE11-206ENST00000536144 TNS3Q68CZ2 1445 aa12.57□□□□□ -0.4
MRE11-206ENST00000536144 HSPA5P11021 654 aaKnown RBP12.57□□□□□ -0.4
MRE11-206ENST00000536144 ITSN1Q15811 1721 aa12.57□□□□□ -0.4
MRE11-206ENST00000536144 SPRYD3Q8NCJ5 442 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 SHPRHQ149N8 1683 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 TOPAZ1Q8N9V7 1692 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 NINLQ9Y2I6 1382 aa12.56□□□□□ -0.4
MRE11-206ENST00000536144 CFAP44Q96MT7 982 aa12.55□□□□□ -0.4
MRE11-206ENST00000536144 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 NUTM2BA6NNL0 878 aaPredicted RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 NUTM2EB1AL46 878 aaPredicted RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 PAXIP1Q6ZW49 1069 aaPredicted RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 NUTM2AQ8IVF1 878 aaPredicted RBP12.54□□□□□ -0.4
MRE11-206ENST00000536144 TMC1Q8TDI8 760 aa12.54□□□□□ -0.4
MRE11-206ENST00000536144 SLC12A5Q9H2X9 1139 aa12.54□□□□□ -0.4
MRE11-206ENST00000536144 TERF2IPQ9NYB0 399 aa12.54□□□□□ -0.4
MRE11-206ENST00000536144 SSH2Q76I76 1423 aa12.54□□□□□ -0.4
MRE11-206ENST00000536144 LMOD2Q6P5Q4 547 aa12.53□□□□□ -0.4
MRE11-206ENST00000536144 USP6P35125 1406 aa12.53□□□□□ -0.4
MRE11-206ENST00000536144 MED1Q15648 1581 aaPredicted RBP12.52□□□□□ -0.4
MRE11-206ENST00000536144 COL22A1Q8NFW1 1626 aaPredicted RBP12.52□□□□□ -0.4
MRE11-206ENST00000536144 HDGFL2Q7Z4V5 671 aaPredicted RBP12.52□□□□□ -0.41
MRE11-206ENST00000536144 LRP6O75581 1613 aa12.51□□□□□ -0.41
MRE11-206ENST00000536144 TMEM92Q6UXU6 159 aa12.51□□□□□ -0.41
MRE11-206ENST00000536144 ABTB2Q8N961 1025 aa12.51□□□□□ -0.41
MRE11-206ENST00000536144 FAM163AQ96GL9 167 aaPredicted RBP12.51□□□□□ -0.41
MRE11-206ENST00000536144 KTN1Q86UP2 1357 aaKnown RBP12.51□□□□□ -0.41
MRE11-206ENST00000536144 TRPM3Q9HCF6 1732 aaPredicted RBP12.51□□□□□ -0.41
MRE11-206ENST00000536144 MEX3CQ5U5Q3 659 aaKnown RBP12.5□□□□□ -0.41
MRE11-206ENST00000536144 TTC21BQ7Z4L5 1316 aa12.5□□□□□ -0.41
MRE11-206ENST00000536144 TTC21AQ8NDW8 1320 aa12.5□□□□□ -0.41
MRE11-206ENST00000536144 CD163L1Q9NR16 1453 aa12.5□□□□□ -0.41
MRE11-206ENST00000536144 SNPHO15079 494 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 ADAMTS2O95450 1211 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
MRE11-206ENST00000536144 NLRP13Q86W25 1043 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 TMC2Q8TDI7 906 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
MRE11-206ENST00000536144 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
MRE11-206ENST00000536144 ANKRD36BQ8N2N9 1353 aa12.48□□□□□ -0.41
MRE11-206ENST00000536144 HAP1P54257 671 aaPredicted RBP12.48□□□□□ -0.41
MRE11-206ENST00000536144 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
MRE11-206ENST00000536144 RGS17Q9UGC6 210 aaPredicted RBP12.48□□□□□ -0.41
MRE11-206ENST00000536144 ALS2Q96Q42 1657 aa12.48□□□□□ -0.41
MRE11-206ENST00000536144 EDC4Q6P2E9 1401 aaKnown RBP12.47□□□□□ -0.41
MRE11-206ENST00000536144 USP19O94966 1318 aa12.47□□□□□ -0.41
MRE11-206ENST00000536144 C11orf95C9JLR9 678 aaPredicted RBP12.47□□□□□ -0.41
MRE11-206ENST00000536144 NGLY1Q96IV0 654 aa12.47□□□□□ -0.41
MRE11-206ENST00000536144 C8orf37Q96NL8 207 aa12.47□□□□□ -0.41
MRE11-206ENST00000536144 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
MRE11-206ENST00000536144 ZNF772Q68DY9 489 aaPredicted RBP12.46□□□□□ -0.41
MRE11-206ENST00000536144 C2orf72A6NCS6 295 aa12.45□□□□□ -0.42
MRE11-206ENST00000536144 GCP02774 474 aa12.45□□□□□ -0.42
MRE11-206ENST00000536144 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
MRE11-206ENST00000536144 USP31Q70CQ4 1352 aa12.44□□□□□ -0.42
MRE11-206ENST00000536144 AFF2P51816 1311 aa12.44□□□□□ -0.42
MRE11-206ENST00000536144 AKAP12Q02952 1782 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms