RNA–Protein interactions for RNA: ENST00000535643.5

LINC01089-204, Transcript of long intergenic non-protein coding RNA 1089, humanhuman

TSL 1 (best)

Gene LINC01089, Length 1,014 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01089-204ENST00000535643 EVA1CP58658 441 aa17.22■□□□□ 0.35
LINC01089-204ENST00000535643 FMN2Q9NZ56 1722 aa17.21■□□□□ 0.35
LINC01089-204ENST00000535643 CTCFP49711 727 aaPredicted RBP17.21■□□□□ 0.35
LINC01089-204ENST00000535643 THRAP3Q9Y2W1 955 aaKnown RBP17.21■□□□□ 0.35
LINC01089-204ENST00000535643 PNPLA7Q6ZV29 1317 aa17.19■□□□□ 0.34
LINC01089-204ENST00000535643 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
LINC01089-204ENST00000535643 LBX1P52954 281 aa17.17■□□□□ 0.34
LINC01089-204ENST00000535643 SMC1BQ8NDV3 1235 aa17.17■□□□□ 0.34
LINC01089-204ENST00000535643 CRYBG1Q9Y4K1 1723 aa17.17■□□□□ 0.34
LINC01089-204ENST00000535643 E9PCH4 1651 aa17.16■□□□□ 0.34
LINC01089-204ENST00000535643 BCL9O00512 1426 aa17.16■□□□□ 0.34
LINC01089-204ENST00000535643 CD2APQ9Y5K6 639 aa17.16■□□□□ 0.34
LINC01089-204ENST00000535643 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
LINC01089-204ENST00000535643 ALS2Q96Q42 1657 aa17.15■□□□□ 0.34
LINC01089-204ENST00000535643 DDB1Q16531 1140 aa17.14■□□□□ 0.33
LINC01089-204ENST00000535643 MARCH10Q8NA82 808 aaPredicted RBP17.14■□□□□ 0.33
LINC01089-204ENST00000535643 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
LINC01089-204ENST00000535643 TRPM3Q9HCF6 1732 aaPredicted RBP17.13■□□□□ 0.33
LINC01089-204ENST00000535643 ANKRD30AQ9BXX3 1397 aa17.13■□□□□ 0.33
LINC01089-204ENST00000535643 RGPD8O14715 1765 aaPredicted RBP17.12■□□□□ 0.33
LINC01089-204ENST00000535643 ZC3H6P61129 1189 aaKnown RBP17.12■□□□□ 0.33
LINC01089-204ENST00000535643 PRPF38BQ5VTL8 546 aaKnown RBP17.12■□□□□ 0.33
LINC01089-204ENST00000535643 AIDAQ96BJ3 306 aa17.12■□□□□ 0.33
LINC01089-204ENST00000535643 CICQ96RK0 1608 aaPredicted RBP17.11■□□□□ 0.33
LINC01089-204ENST00000535643 LRRC4BQ9NT99 713 aa17.11■□□□□ 0.33
LINC01089-204ENST00000535643 CHIC2Q9UKJ5 165 aa17.11■□□□□ 0.33
LINC01089-204ENST00000535643 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
LINC01089-204ENST00000535643 CFAP44Q96MT7 982 aa17.1■□□□□ 0.33
LINC01089-204ENST00000535643 MKRN1Q9UHC7 482 aaKnown RBP17.1■□□□□ 0.33
LINC01089-204ENST00000535643 C10orf71Q711Q0 1435 aa17.1■□□□□ 0.33
LINC01089-204ENST00000535643 DLL1O00548 723 aa17.09■□□□□ 0.33
LINC01089-204ENST00000535643 IGSF1Q8N6C5 1336 aa17.09■□□□□ 0.33
LINC01089-204ENST00000535643 QSER1Q2KHR3 1735 aa17.09■□□□□ 0.33
LINC01089-204ENST00000535643 DAPK1P53355 1430 aa17.07■□□□□ 0.32
LINC01089-204ENST00000535643 RRAGCQ9HB90 399 aa17.06■□□□□ 0.32
LINC01089-204ENST00000535643 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
LINC01089-204ENST00000535643 TFCP2L1Q9NZI6 479 aa17.05■□□□□ 0.32
LINC01089-204ENST00000535643 CLTCL1P53675 1640 aa17.05■□□□□ 0.32
LINC01089-204ENST00000535643 KCPQ6ZWJ8 1503 aa17.04■□□□□ 0.32
LINC01089-204ENST00000535643 HSPA8P11142 646 aaKnown RBP17.03■□□□□ 0.32
LINC01089-204ENST00000535643 APLP2Q06481 763 aa17.03■□□□□ 0.32
LINC01089-204ENST00000535643 MSL1Q68DK7 614 aa17.03■□□□□ 0.32
LINC01089-204ENST00000535643 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.32
LINC01089-204ENST00000535643 STK26Q9P289 416 aa17.02■□□□□ 0.32
LINC01089-204ENST00000535643 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.31
LINC01089-204ENST00000535643 WBP1LQ9NX94 342 aa17.01■□□□□ 0.31
LINC01089-204ENST00000535643 KDM2BQ8NHM5 1336 aa17■□□□□ 0.31
LINC01089-204ENST00000535643 CUL9Q8IWT3 2517 aa17■□□□□ 0.31
LINC01089-204ENST00000535643 ANKRD50Q9ULJ7 1429 aa17■□□□□ 0.31
LINC01089-204ENST00000535643 TUBGCP6Q96RT7 1819 aa17■□□□□ 0.31
LINC01089-204ENST00000535643 CRB1P82279 1406 aa16.99■□□□□ 0.31
LINC01089-204ENST00000535643 VGFO15240 615 aaPredicted RBP16.99■□□□□ 0.31
LINC01089-204ENST00000535643 LMO7Q8WWI1 1683 aa16.98■□□□□ 0.31
LINC01089-204ENST00000535643 PAK3O75914 559 aaPredicted RBP16.98■□□□□ 0.31
LINC01089-204ENST00000535643 HIRIP3Q9BW71 556 aaPredicted RBP16.98■□□□□ 0.31
LINC01089-204ENST00000535643 IFT172Q9UG01 1749 aa16.98■□□□□ 0.31
LINC01089-204ENST00000535643 AKAP12Q02952 1782 aa16.97■□□□□ 0.31
LINC01089-204ENST00000535643 PLEKHG2Q9H7P9 1386 aa16.97■□□□□ 0.31
LINC01089-204ENST00000535643 COL5A2P05997 1499 aaPredicted RBP16.97■□□□□ 0.31
LINC01089-204ENST00000535643 ACSBG1Q96GR2 724 aa16.96■□□□□ 0.31
LINC01089-204ENST00000535643 MIER1Q8N108 512 aa16.95■□□□□ 0.3
LINC01089-204ENST00000535643 CREBZFQ9NS37 354 aa16.95■□□□□ 0.3
LINC01089-204ENST00000535643 NHSQ6T4R5 1651 aa16.94■□□□□ 0.3
LINC01089-204ENST00000535643 CNTNAP1P78357 1384 aa16.94■□□□□ 0.3
LINC01089-204ENST00000535643 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
LINC01089-204ENST00000535643 COL23A1Q86Y22 540 aaPredicted RBP16.94■□□□□ 0.3
LINC01089-204ENST00000535643 C9orf131Q5VYM1 1079 aa16.93■□□□□ 0.3
LINC01089-204ENST00000535643 TNRC6CQ9HCJ0 1690 aaKnown RBP16.92■□□□□ 0.3
LINC01089-204ENST00000535643 A0A0C4DFX4 3053 aa16.92■□□□□ 0.3
LINC01089-204ENST00000535643 ABCC11Q96J66 1382 aa16.91■□□□□ 0.3
LINC01089-204ENST00000535643 SLC27A3Q5K4L6 730 aa16.91■□□□□ 0.3
LINC01089-204ENST00000535643 ARHGAP27Q6ZUM4 889 aa16.91■□□□□ 0.3
LINC01089-204ENST00000535643 NUTM2GQ5VZR2 741 aa16.9■□□□□ 0.3
LINC01089-204ENST00000535643 PITPNM2Q9BZ72 1349 aa16.9■□□□□ 0.3
LINC01089-204ENST00000535643 KCNQ4P56696 695 aa16.89■□□□□ 0.29
LINC01089-204ENST00000535643 CPDO75976 1380 aa16.89■□□□□ 0.29
LINC01089-204ENST00000535643 USP6P35125 1406 aa16.88■□□□□ 0.29
LINC01089-204ENST00000535643 ANKARQ7Z5J8 1434 aa16.88■□□□□ 0.29
LINC01089-204ENST00000535643 VEGFBP49765 207 aa16.88■□□□□ 0.29
LINC01089-204ENST00000535643 PPP4R3CPQ6ZMV5 832 aa16.88■□□□□ 0.29
LINC01089-204ENST00000535643 BTAF1O14981 1849 aa16.87■□□□□ 0.29
LINC01089-204ENST00000535643 HABP4Q5JVS0 413 aaKnown RBP16.87■□□□□ 0.29
LINC01089-204ENST00000535643 GCC1Q96CN9 775 aa16.87■□□□□ 0.29
LINC01089-204ENST00000535643 CDCA7Q9BWT1 371 aaPredicted RBP16.87■□□□□ 0.29
LINC01089-204ENST00000535643 MCOLN1Q9GZU1 580 aa16.86■□□□□ 0.29
LINC01089-204ENST00000535643 TOM1L2Q6ZVM7 507 aa16.85■□□□□ 0.29
LINC01089-204ENST00000535643 BCS1LQ9Y276 419 aa16.85■□□□□ 0.29
LINC01089-204ENST00000535643 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
LINC01089-204ENST00000535643 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
LINC01089-204ENST00000535643 WNK3Q9BYP7 1800 aa16.84■□□□□ 0.29
LINC01089-204ENST00000535643 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
LINC01089-204ENST00000535643 EXOC5O00471 708 aa16.83■□□□□ 0.28
LINC01089-204ENST00000535643 TMEM132EQ6IEE7 984 aa16.83■□□□□ 0.28
LINC01089-204ENST00000535643 VEGFAP15692 232 aaPredicted RBP16.81■□□□□ 0.28
LINC01089-204ENST00000535643 NGDNQ8NEJ9 315 aaKnown RBP16.81■□□□□ 0.28
LINC01089-204ENST00000535643 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
LINC01089-204ENST00000535643 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
LINC01089-204ENST00000535643 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
LINC01089-204ENST00000535643 SOX10P56693 466 aa16.79■□□□□ 0.28
LINC01089-204ENST00000535643 RNF181Q9P0P0 153 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms