RNA–Protein interactions for RNA: ENST00000535458.6

KPNB1-202, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 3,163 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-202ENST00000535458 GLIPR1L2Q4G1C9 344 aa11.1□□□□□ -0.63
KPNB1-202ENST00000535458 MRPL50Q8N5N7 158 aaKnown RBP11.1□□□□□ -0.63
KPNB1-202ENST00000535458 TSPYL6Q8N831 410 aa11.1□□□□□ -0.63
KPNB1-202ENST00000535458 ZBTB7BO15156 539 aaPredicted RBP11.09□□□□□ -0.63
KPNB1-202ENST00000535458 MAP2P11137 1827 aaKnown RBP11.09□□□□□ -0.63
KPNB1-202ENST00000535458 PPIP5K1Q6PFW1 1433 aa11.09□□□□□ -0.63
KPNB1-202ENST00000535458 ELL2O00472 640 aaPredicted RBP11.09□□□□□ -0.63
KPNB1-202ENST00000535458 CALD1Q05682 793 aaKnown RBP11.09□□□□□ -0.63
KPNB1-202ENST00000535458 CHMP5Q9NZZ3 219 aa11.09□□□□□ -0.63
KPNB1-202ENST00000535458 XRCC6P12956 609 aaKnown RBP eCLIP11.08□□□□□ -0.64
KPNB1-202ENST00000535458 IL13P35225 146 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 GNAI1P63096 354 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 NME9Q86XW9 330 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 PKNOX2Q96KN3 472 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 AGLP35573 1532 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 DLC1Q96QB1 1528 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 HSP90AA1P07900 732 aaKnown RBP11.08□□□□□ -0.64
KPNB1-202ENST00000535458 MCM4P33991 863 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 ANKRD45Q5TZF3 282 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 HSCBQ8IWL3 235 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 C1orf115Q9H7X2 142 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 ZRANB1Q9UGI0 708 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 A2ML1A8K2U0 1454 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 HSP90AA2PQ14568 343 aaPredicted RBP11.08□□□□□ -0.64
KPNB1-202ENST00000535458 ARHGAP45Q92619 1136 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 ARID3AQ99856 593 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 MBIPQ9NS73 344 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 IFT57Q9NWB7 429 aa11.08□□□□□ -0.64
KPNB1-202ENST00000535458 RIMS2Q9UQ26 1411 aa11.07□□□□□ -0.64
KPNB1-202ENST00000535458 WASLO00401 505 aaPredicted RBP11.07□□□□□ -0.64
KPNB1-202ENST00000535458 RBM25P49756 843 aaKnown RBP11.07□□□□□ -0.64
KPNB1-202ENST00000535458 CHMP4BQ9H444 224 aaKnown RBP11.07□□□□□ -0.64
KPNB1-202ENST00000535458 ZNF853P0CG23 659 aa11.06□□□□□ -0.64
KPNB1-202ENST00000535458 GCC1Q96CN9 775 aa11.06□□□□□ -0.64
KPNB1-202ENST00000535458 CPSF1Q10570 1443 aaKnown RBP11.06□□□□□ -0.64
KPNB1-202ENST00000535458 BMP2KLQ5H9B9 411 aa11.06□□□□□ -0.64
KPNB1-202ENST00000535458 EDC4Q6P2E9 1401 aaKnown RBP11.06□□□□□ -0.64
KPNB1-202ENST00000535458 TRIM44Q96DX7 344 aaPredicted RBP11.06□□□□□ -0.64
KPNB1-202ENST00000535458 PTCH1Q13635 1447 aa11.06□□□□□ -0.64
KPNB1-202ENST00000535458 PIK3R4Q99570 1358 aa11.06□□□□□ -0.64
KPNB1-202ENST00000535458 KCNA4P22459 653 aa11.06□□□□□ -0.64
KPNB1-202ENST00000535458 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
KPNB1-202ENST00000535458 NCKAP5LQ9HCH0 1330 aa11.05□□□□□ -0.64
KPNB1-202ENST00000535458 MLECQ14165 292 aa11.05□□□□□ -0.64
KPNB1-202ENST00000535458 RRS1Q15050 365 aaKnown RBP11.05□□□□□ -0.64
KPNB1-202ENST00000535458 TXNDC2Q86VQ3 553 aa11.05□□□□□ -0.64
KPNB1-202ENST00000535458 C8orf58Q8NAV2 365 aa11.05□□□□□ -0.64
KPNB1-202ENST00000535458 PPP6R1Q9UPN7 881 aa11.05□□□□□ -0.64
KPNB1-202ENST00000535458 ADAMTSL3P82987 1691 aa11.05□□□□□ -0.64
KPNB1-202ENST00000535458 ABCC4O15439 1325 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 TRAK2O60296 914 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 SIRT2Q8IXJ6 389 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 NUDT16Q96DE0 195 aaKnown RBP11.04□□□□□ -0.64
KPNB1-202ENST00000535458 COG3Q96JB2 828 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 CFAP44Q96MT7 982 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 CDK12Q9NYV4 1490 aaPredicted RBP11.04□□□□□ -0.64
KPNB1-202ENST00000535458 SETD1AO15047 1707 aaKnown RBP11.04□□□□□ -0.64
KPNB1-202ENST00000535458 FAM83GA6ND36 823 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 ZNF692Q9BU19 519 aaPredicted RBP11.04□□□□□ -0.64
KPNB1-202ENST00000535458 AATKQ6ZMQ8 1374 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 LMOD3Q0VAK6 560 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 SNX21Q969T3 373 aa11.04□□□□□ -0.64
KPNB1-202ENST00000535458 DCTN1Q14203 1278 aa11.03□□□□□ -0.64
KPNB1-202ENST00000535458 METP08581 1390 aa11.03□□□□□ -0.64
KPNB1-202ENST00000535458 FER1L4A9Z1Z3 1794 aa11.03□□□□□ -0.64
KPNB1-202ENST00000535458 SPATA31D1Q6ZQQ2 1576 aa11.02□□□□□ -0.64
KPNB1-202ENST00000535458 API5Q9BZZ5 524 aaKnown RBP11.02□□□□□ -0.64
KPNB1-202ENST00000535458 CCDC61Q9Y6R9 512 aa11.02□□□□□ -0.64
KPNB1-202ENST00000535458 ZBTB7CA1YPR0 619 aa11.02□□□□□ -0.65
KPNB1-202ENST00000535458 CPS1P31327 1500 aa11.02□□□□□ -0.65
KPNB1-202ENST00000535458 NCOA3Q9Y6Q9 1424 aa11.02□□□□□ -0.65
KPNB1-202ENST00000535458 TBC1D9Q6ZT07 1266 aa11.02□□□□□ -0.65
KPNB1-202ENST00000535458 ZMYND15Q9H091 742 aa11.02□□□□□ -0.65
KPNB1-202ENST00000535458 DLG5Q8TDM6 1919 aa11.01□□□□□ -0.65
KPNB1-202ENST00000535458 HSP90AB1P08238 724 aaKnown RBP11.01□□□□□ -0.65
KPNB1-202ENST00000535458 DDIT3P35638 169 aa11.01□□□□□ -0.65
KPNB1-202ENST00000535458 KIF2CQ99661 725 aa11.01□□□□□ -0.65
KPNB1-202ENST00000535458 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.01□□□□□ -0.653e-6■□□□□ 8.2
KPNB1-202ENST00000535458 NRXN3Q9Y4C0 1643 aa11□□□□□ -0.65
KPNB1-202ENST00000535458 FSD2A1L4K1 749 aa11□□□□□ -0.65
KPNB1-202ENST00000535458 RIMS1Q86UR5 1692 aaKnown RBP11□□□□□ -0.65
KPNB1-202ENST00000535458 DDX11L8A8MPP1 907 aa10.99□□□□□ -0.65
KPNB1-202ENST00000535458 NCLP19338 710 aaKnown RBP10.99□□□□□ -0.65
KPNB1-202ENST00000535458 AEBP1Q8IUX7 1158 aa10.99□□□□□ -0.65
KPNB1-202ENST00000535458 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
KPNB1-202ENST00000535458 MON2Q7Z3U7 1717 aa10.98□□□□□ -0.65
KPNB1-202ENST00000535458 CDC45O75419 566 aa10.98□□□□□ -0.65
KPNB1-202ENST00000535458 SULT6B1Q6IMI4 303 aa10.98□□□□□ -0.65
KPNB1-202ENST00000535458 TNPO1Q92973 898 aaKnown RBP10.98□□□□□ -0.65
KPNB1-202ENST00000535458 RBM42Q9BTD8 480 aaKnown RBP10.98□□□□□ -0.65
KPNB1-202ENST00000535458 PRR36Q9H6K5 1346 aa10.98□□□□□ -0.65
KPNB1-202ENST00000535458 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
KPNB1-202ENST00000535458 KRT24Q2M2I5 525 aa10.98□□□□□ -0.65
KPNB1-202ENST00000535458 SIRT1Q96EB6 747 aa10.98□□□□□ -0.65
KPNB1-202ENST00000535458 DCTPP1Q9H773 170 aa10.98□□□□□ -0.65
KPNB1-202ENST00000535458 GRPEL1Q9HAV7 217 aa10.98□□□□□ -0.65
KPNB1-202ENST00000535458 CIZ1Q9ULV3 898 aaPredicted RBP10.98□□□□□ -0.65
KPNB1-202ENST00000535458 KIF24Q5T7B8 1368 aa10.97□□□□□ -0.65
KPNB1-202ENST00000535458 GSPT1P15170 499 aaKnown RBP10.97□□□□□ -0.65
KPNB1-202ENST00000535458 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms