RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 WDR17Q8IZU2 1322 aa14.61□□□□□ -0.07
CSDE1-217ENST00000534699 ANKRD36BQ8N2N9 1353 aa14.6□□□□□ -0.07
CSDE1-217ENST00000534699 PEAK1Q9H792 1746 aa14.6□□□□□ -0.07
CSDE1-217ENST00000534699 LTN1O94822 1766 aa14.6□□□□□ -0.07
CSDE1-217ENST00000534699 LRP5O75197 1615 aa14.6□□□□□ -0.07
CSDE1-217ENST00000534699 OVOS2A0A0J9YW53 1432 aa14.6□□□□□ -0.07
CSDE1-217ENST00000534699 OVOS2Q6IE36 1432 aa14.6□□□□□ -0.07
CSDE1-217ENST00000534699 CHRNA2Q15822 529 aa14.59□□□□□ -0.07
CSDE1-217ENST00000534699 CARD10Q9BWT7 1032 aa14.59□□□□□ -0.07
CSDE1-217ENST00000534699 LRRC37A3O60309 1634 aa14.59□□□□□ -0.07
CSDE1-217ENST00000534699 RREB1Q92766 1687 aa14.59□□□□□ -0.07
CSDE1-217ENST00000534699 USP47Q96K76 1375 aa14.59□□□□□ -0.07
CSDE1-217ENST00000534699 RGPD5Q99666 1765 aa14.58□□□□□ -0.08
CSDE1-217ENST00000534699 KIF24Q5T7B8 1368 aa14.58□□□□□ -0.08
CSDE1-217ENST00000534699 NUTM2GQ5VZR2 741 aa14.58□□□□□ -0.08
CSDE1-217ENST00000534699 PDE3BQ13370 1112 aa14.58□□□□□ -0.08
CSDE1-217ENST00000534699 STRN4Q9NRL3 753 aa14.58□□□□□ -0.08
CSDE1-217ENST00000534699 OVOS2A0A0G2JMS6 1433 aa14.57□□□□□ -0.08
CSDE1-217ENST00000534699 A0A1W2PP64 1363 aa14.57□□□□□ -0.08
CSDE1-217ENST00000534699 RTL1A6NKG5 1358 aa14.57□□□□□ -0.08
CSDE1-217ENST00000534699 LARP1Q6PKG0 1096 aaKnown RBP14.57□□□□□ -0.08
CSDE1-217ENST00000534699 SBF2Q86WG5 1849 aa14.57□□□□□ -0.08
CSDE1-217ENST00000534699 KIF20BQ96Q89 1820 aa14.57□□□□□ -0.08
CSDE1-217ENST00000534699 ST20-MTHFSA0A0A6YYL1 179 aa14.56□□□□□ -0.08
CSDE1-217ENST00000534699 A0A0G2JS52 829 aa14.56□□□□□ -0.08
CSDE1-217ENST00000534699 MYT1Q01538 1121 aa14.56□□□□□ -0.08
CSDE1-217ENST00000534699 TMC1Q8TDI8 760 aa14.53□□□□□ -0.08
CSDE1-217ENST00000534699 PLEKHG5O94827 1062 aa14.53□□□□□ -0.08
CSDE1-217ENST00000534699 TOM1L2Q6ZVM7 507 aa14.53□□□□□ -0.08
CSDE1-217ENST00000534699 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
CSDE1-217ENST00000534699 PLEKHG2Q9H7P9 1386 aa14.52□□□□□ -0.09
CSDE1-217ENST00000534699 TNS2Q63HR2 1409 aa14.52□□□□□ -0.09
CSDE1-217ENST00000534699 MYOM1P52179 1685 aa14.52□□□□□ -0.09
CSDE1-217ENST00000534699 HMGB2P26583 209 aaKnown RBP14.51□□□□□ -0.09
CSDE1-217ENST00000534699 DDB1Q16531 1140 aa14.51□□□□□ -0.09
CSDE1-217ENST00000534699 IP6K1Q92551 441 aa14.51□□□□□ -0.09
CSDE1-217ENST00000534699 COG3Q96JB2 828 aa14.51□□□□□ -0.09
CSDE1-217ENST00000534699 NUP188Q5SRE5 1749 aa14.51□□□□□ -0.09
CSDE1-217ENST00000534699 ANKRD26Q9UPS8 1709 aa14.5□□□□□ -0.09
CSDE1-217ENST00000534699 PLSCR1O15162 318 aa14.49□□□□□ -0.09
CSDE1-217ENST00000534699 NHSQ6T4R5 1651 aa14.49□□□□□ -0.09
CSDE1-217ENST00000534699 ERBB3P21860 1342 aa14.49□□□□□ -0.09
CSDE1-217ENST00000534699 CAMKK2Q96RR4 588 aa14.49□□□□□ -0.09
CSDE1-217ENST00000534699 NME9Q86XW9 330 aa14.49□□□□□ -0.09
CSDE1-217ENST00000534699 AXIN2Q9Y2T1 843 aa14.48□□□□□ -0.09
CSDE1-217ENST00000534699 CGNL1Q0VF96 1302 aa14.48□□□□□ -0.09
CSDE1-217ENST00000534699 CSB-PGBD3P0DP91 1061 aa14.48□□□□□ -0.09
CSDE1-217ENST00000534699 BCL11BQ9C0K0 894 aaPredicted RBP14.48□□□□□ -0.09
CSDE1-217ENST00000534699 EXOC5O00471 708 aa14.47□□□□□ -0.09
CSDE1-217ENST00000534699 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.47□□□□□ -0.09
CSDE1-217ENST00000534699 NBPF14Q5TI25 921 aa14.46□□□□□ -0.09
CSDE1-217ENST00000534699 DEFB132Q7Z7B7 95 aa14.46□□□□□ -0.1
CSDE1-217ENST00000534699 SMG6Q86US8 1419 aaKnown RBP14.45□□□□□ -0.1
CSDE1-217ENST00000534699 IL2RBP14784 551 aa14.45□□□□□ -0.1
CSDE1-217ENST00000534699 APBA3O96018 575 aa14.44□□□□□ -0.1
CSDE1-217ENST00000534699 ANKRD24Q8TF21 1146 aa14.44□□□□□ -0.1
CSDE1-217ENST00000534699 NSD2O96028 1365 aa14.44□□□□□ -0.1
CSDE1-217ENST00000534699 TRIM37O94972 964 aa14.44□□□□□ -0.1
CSDE1-217ENST00000534699 USP35Q9P2H5 1018 aa14.44□□□□□ -0.1
CSDE1-217ENST00000534699 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.1
CSDE1-217ENST00000534699 ZBTB7CA1YPR0 619 aa14.42□□□□□ -0.1
CSDE1-217ENST00000534699 EN1Q05925 392 aaPredicted RBP14.42□□□□□ -0.1
CSDE1-217ENST00000534699 INSRP06213 1382 aa14.42□□□□□ -0.1
CSDE1-217ENST00000534699 QSER1Q2KHR3 1735 aa14.42□□□□□ -0.1
CSDE1-217ENST00000534699 FYB1O15117 783 aa14.42□□□□□ -0.1
CSDE1-217ENST00000534699 HOXC9P31274 260 aa14.41□□□□□ -0.1
CSDE1-217ENST00000534699 FLT4P35916 1363 aa14.4□□□□□ -0.1
CSDE1-217ENST00000534699 NCAPD2Q15021 1401 aa14.4□□□□□ -0.1
CSDE1-217ENST00000534699 MAP3K19Q56UN5 1328 aa14.4□□□□□ -0.1
CSDE1-217ENST00000534699 MARCH10Q8NA82 808 aaPredicted RBP14.4□□□□□ -0.1
CSDE1-217ENST00000534699 NLRP2Q9NX02 1062 aa14.4□□□□□ -0.1
CSDE1-217ENST00000534699 AMPHP49418 695 aa14.39□□□□□ -0.11
CSDE1-217ENST00000534699 PCGF6Q9BYE7 350 aa14.39□□□□□ -0.11
CSDE1-217ENST00000534699 EZH2Q15910 746 aaKnown RBP14.39□□□□□ -0.11
CSDE1-217ENST00000534699 CCER1Q8TC90 406 aaPredicted RBP14.38□□□□□ -0.11
CSDE1-217ENST00000534699 NSD3Q9BZ95 1437 aa14.38□□□□□ -0.11
CSDE1-217ENST00000534699 SHANK3Q9BYB0 1731 aa14.37□□□□□ -0.11
CSDE1-217ENST00000534699 PKD1L3Q7Z443 1732 aa14.37□□□□□ -0.11
CSDE1-217ENST00000534699 CASZ1Q86V15 1759 aa14.37□□□□□ -0.11
CSDE1-217ENST00000534699 BTAF1O14981 1849 aa14.36□□□□□ -0.11
CSDE1-217ENST00000534699 MAP2P11137 1827 aaKnown RBP14.36□□□□□ -0.11
CSDE1-217ENST00000534699 RGPD2P0DJD1 1756 aa14.35□□□□□ -0.11
CSDE1-217ENST00000534699 SOX12O15370 315 aa14.35□□□□□ -0.11
CSDE1-217ENST00000534699 FAM182BQ5T319 152 aa14.35□□□□□ -0.11
CSDE1-217ENST00000534699 PAPPAQ13219 1627 aa14.35□□□□□ -0.11
CSDE1-217ENST00000534699 LY75O60449 1722 aa14.34□□□□□ -0.11
CSDE1-217ENST00000534699 WASHC2AQ641Q2 1341 aa14.34□□□□□ -0.11
CSDE1-217ENST00000534699 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.34□□□□□ -0.111e-11■■□□□ 14.1
CSDE1-217ENST00000534699 SLC27A3Q5K4L6 730 aa14.33□□□□□ -0.12
CSDE1-217ENST00000534699 CARD14Q9BXL6 1004 aa14.33□□□□□ -0.12
CSDE1-217ENST00000534699 COL24A1Q17RW2 1714 aa14.32□□□□□ -0.12
CSDE1-217ENST00000534699 HSPA5P11021 654 aaKnown RBP14.32□□□□□ -0.12
CSDE1-217ENST00000534699 ZCRB1Q8TBF4 217 aaKnown RBP14.32□□□□□ -0.12
CSDE1-217ENST00000534699 GGNBP2Q9H3C7 697 aa14.32□□□□□ -0.12
CSDE1-217ENST00000534699 TATP17735 454 aaPredicted RBP14.31□□□□□ -0.12
CSDE1-217ENST00000534699 DOT1LQ8TEK3 1739 aa14.31□□□□□ -0.12
CSDE1-217ENST00000534699 RAPGEF4Q8WZA2 1011 aa14.31□□□□□ -0.12
CSDE1-217ENST00000534699 STK32BQ9NY57 414 aa14.3□□□□□ -0.12
CSDE1-217ENST00000534699 R3HDM1Q15032 1099 aaKnown RBP14.3□□□□□ -0.12
CSDE1-217ENST00000534699 PCDH11XQ9BZA7 1347 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms