RNA–Protein interactions for RNA: ENST00000534548.6

NCAPD3-214, Transcript of non-SMC condensin II complex subunit D3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NCAPD3, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-214ENST00000534548 WWC1Q8IX03 1113 aa12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 RUFY2Q8WXA3 655 aa12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 TSR2Q969E8 191 aaKnown RBP12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 ZKSCAN5Q9Y2L8 839 aa12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 PRDM15P57071 1507 aaPredicted RBP12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 DUOX2Q9NRD8 1548 aa12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 MTHFSP49914 203 aa12.27□□□□□ -0.45
NCAPD3-214ENST00000534548 CCDC73Q6ZRK6 1079 aa12.26□□□□□ -0.45
NCAPD3-214ENST00000534548 ATF7IPQ6VMQ6 1270 aa12.26□□□□□ -0.45
NCAPD3-214ENST00000534548 USP25Q9UHP3 1055 aa12.26□□□□□ -0.45
NCAPD3-214ENST00000534548 PREX2Q70Z35 1606 aa12.26□□□□□ -0.45
NCAPD3-214ENST00000534548 PLCH2O75038 1416 aa12.26□□□□□ -0.45
NCAPD3-214ENST00000534548 NKTRP30414 1462 aaKnown RBP12.25□□□□□ -0.45
NCAPD3-214ENST00000534548 ERCC6L2Q5T890 1561 aa12.25□□□□□ -0.45
NCAPD3-214ENST00000534548 WDR63Q8IWG1 891 aa12.25□□□□□ -0.45
NCAPD3-214ENST00000534548 RBM27Q9P2N5 1060 aaKnown RBP12.25□□□□□ -0.45
NCAPD3-214ENST00000534548 DIAPH1O60610 1272 aaKnown RBP12.25□□□□□ -0.45
NCAPD3-214ENST00000534548 ZNF521Q96K83 1311 aa12.25□□□□□ -0.45
NCAPD3-214ENST00000534548 NAT10Q9H0A0 1025 aaKnown RBP12.25□□□□□ -0.45
NCAPD3-214ENST00000534548 ERC2O15083 957 aa12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 ASXL1Q8IXJ9 1541 aa12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 HS1BP3Q53T59 392 aa12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 TIGD1Q96MW7 591 aa12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 E9PCH4 1651 aa12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 SEC24BO95487 1268 aa12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 CCDC70Q6NSX1 233 aa12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.24□□□□□ -0.45
NCAPD3-214ENST00000534548 H0YHG0 523 aa12.23□□□□□ -0.45
NCAPD3-214ENST00000534548 TPM1P09493 284 aa12.23□□□□□ -0.45
NCAPD3-214ENST00000534548 RARSP54136 660 aaKnown RBP12.23□□□□□ -0.45
NCAPD3-214ENST00000534548 EIF2AK4Q9P2K8 1649 aaKnown RBP12.23□□□□□ -0.45
NCAPD3-214ENST00000534548 TNMDQ9H2S6 317 aa12.22□□□□□ -0.45
NCAPD3-214ENST00000534548 GNAI1P63096 354 aa12.22□□□□□ -0.45
NCAPD3-214ENST00000534548 DEF6Q9H4E7 631 aa12.22□□□□□ -0.45
NCAPD3-214ENST00000534548 SMC2O95347 1197 aa12.22□□□□□ -0.45
NCAPD3-214ENST00000534548 NOLC1Q14978 699 aaKnown RBP eCLIP12.22□□□□□ -0.45
NCAPD3-214ENST00000534548 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
NCAPD3-214ENST00000534548 CABP2Q9NPB3 220 aa12.22□□□□□ -0.45
NCAPD3-214ENST00000534548 CCP110O43303 1012 aa12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 IGSF3O75054 1194 aa12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 ADCY5O95622 1261 aa12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 CT47B1P0C2W7 299 aaPredicted RBP12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 ZNF830Q96NB3 372 aaPredicted RBP12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 CHMP4AQ9BY43 222 aa12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 MAST1Q9Y2H9 1570 aa12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 NSD3Q9BZ95 1437 aa12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 CALRP27797 417 aaKnown RBP12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 RDXP35241 583 aaKnown RBP12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 RNF20Q5VTR2 975 aa12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 TULP1O00294 542 aaPredicted RBP12.21□□□□□ -0.45
NCAPD3-214ENST00000534548 TNNT1P13805 278 aa12.21□□□□□ -0.46
NCAPD3-214ENST00000534548 C16orf45Q96MC5 204 aaPredicted RBP12.21□□□□□ -0.46
NCAPD3-214ENST00000534548 SDF4Q9BRK5 362 aa12.21□□□□□ -0.46
NCAPD3-214ENST00000534548 RLBP1P12271 317 aa12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 SKIDA1Q1XH10 827 aa12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 CCDC183Q5T5S1 534 aa12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 DNAJC2Q99543 621 aaKnown RBP12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 HDAC5Q9UQL6 1122 aa12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 TSR1Q2NL82 804 aaKnown RBP12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 ATP10AO60312 1499 aa12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 PTPN14Q15678 1187 aa12.2□□□□□ -0.46
NCAPD3-214ENST00000534548 PES1O00541 588 aaKnown RBP12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 FOSBP53539 338 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 TERF1P54274 439 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 TMEM57Q8N5G2 664 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 ERCC4Q92889 916 aaPredicted RBP12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 GGNBP2Q9H3C7 697 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 PCDHB15Q9Y5E8 787 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 EVC2Q86UK5 1308 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 PIK3C2GO75747 1445 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 TMCO3Q6UWJ1 677 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 PDILTQ8N807 584 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 UGGT1Q9NYU2 1555 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 KIF20AO95235 890 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 FILIP1Q7Z7B0 1213 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 PLCD3Q8N3E9 789 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 CHMP4CQ96CF2 233 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 NUP62CLQ9H1M0 184 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 ABCC2Q92887 1545 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 UNC13BO14795 1591 aa12.19□□□□□ -0.46
NCAPD3-214ENST00000534548 PRIM1P49642 420 aaKnown RBP12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 UBXN4Q92575 508 aa12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 NOL7Q9UMY1 257 aaKnown RBP12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 PATL2C9JE40 543 aaKnown RBP12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 KINO60870 393 aaKnown RBP12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 NOL10Q9BSC4 688 aaKnown RBP12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 RAB3GAP1Q15042 981 aa12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 IQGAP3Q86VI3 1631 aa12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 PDCP20941 246 aa12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 TRMT2AQ8IZ69 625 aaKnown RBP12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 RUFY1Q96T51 708 aa12.18□□□□□ -0.46
NCAPD3-214ENST00000534548 KRT85P78386 507 aa12.17□□□□□ -0.46
NCAPD3-214ENST00000534548 KRT222Q8N1A0 295 aa12.17□□□□□ -0.46
NCAPD3-214ENST00000534548 INSRP06213 1382 aa12.17□□□□□ -0.46
NCAPD3-214ENST00000534548 NOS1P29475 1434 aa12.17□□□□□ -0.46
NCAPD3-214ENST00000534548 UVSSAQ2YD98 709 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms