RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	CABLES1	Q8TDN4	633 aa		10.65	□□□□□ -0.7
PICALM-223	ENST00000534412	UNC93B1	Q9H1C4	597 aa		10.65	□□□□□ -0.7
PICALM-223	ENST00000534412	LIMD1	Q9UGP4	676 aa		10.65	□□□□□ -0.7
PICALM-223	ENST00000534412	CFAP99	D6REC4	459 aa		10.64	□□□□□ -0.71
PICALM-223	ENST00000534412	CLK2	P49760	499 aa	Known RBP	10.64	□□□□□ -0.71
PICALM-223	ENST00000534412	TUSC1	Q2TAM9	212 aa		10.64	□□□□□ -0.71
PICALM-223	ENST00000534412	LYPD8	Q6UX82	237 aa		10.64	□□□□□ -0.71
PICALM-223	ENST00000534412	EHBP1	Q8NDI1	1231 aa		10.64	□□□□□ -0.71
PICALM-223	ENST00000534412	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.64	□□□□□ -0.71
PICALM-223	ENST00000534412	UGGT2	Q9NYU1	1516 aa		10.63	□□□□□ -0.71
PICALM-223	ENST00000534412	AXIN1	O15169	862 aa		10.62	□□□□□ -0.71
PICALM-223	ENST00000534412	CTC1	Q2NKJ3	1217 aa		10.62	□□□□□ -0.71
PICALM-223	ENST00000534412	DDRGK1	Q96HY6	314 aa		10.62	□□□□□ -0.71
PICALM-223	ENST00000534412	KDM4C	Q9H3R0	1056 aa		10.62	□□□□□ -0.71
PICALM-223	ENST00000534412	POLR3E	Q9NVU0	708 aa		10.62	□□□□□ -0.71
PICALM-223	ENST00000534412	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.61	□□□□□ -0.71
PICALM-223	ENST00000534412	ST8SIA5	O15466	376 aa		10.61	□□□□□ -0.71
PICALM-223	ENST00000534412	AVP	P01185	164 aa		10.61	□□□□□ -0.71
PICALM-223	ENST00000534412	HELB	Q8NG08	1087 aa	Predicted RBP	10.61	□□□□□ -0.71
PICALM-223	ENST00000534412	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.61	□□□□□ -0.71
PICALM-223	ENST00000534412	AAAS	Q9NRG9	546 aa		10.61	□□□□□ -0.71
PICALM-223	ENST00000534412	ZCCHC11	Q5TAX3	1644 aa	Known RBP	10.61	□□□□□ -0.71
PICALM-223	ENST00000534412	WDR7	Q9Y4E6	1490 aa		10.61	□□□□□ -0.71
PICALM-223	ENST00000534412	KIAA0556	O60303	1618 aa		10.6	□□□□□ -0.71
PICALM-223	ENST00000534412	LILRB3	O75022	631 aa		10.6	□□□□□ -0.71
PICALM-223	ENST00000534412	QPCT	Q16769	361 aa		10.6	□□□□□ -0.71
PICALM-223	ENST00000534412	LINC01559	Q495D7	138 aa		10.6	□□□□□ -0.71
PICALM-223	ENST00000534412	BAP1	Q92560	729 aa		10.6	□□□□□ -0.71
PICALM-223	ENST00000534412		J3QL48	77 aa		10.59	□□□□□ -0.71
PICALM-223	ENST00000534412	ALDH1A1	P00352	501 aa		10.59	□□□□□ -0.71
PICALM-223	ENST00000534412	SMPD1	P17405	629 aa		10.59	□□□□□ -0.71
PICALM-223	ENST00000534412	SH3BP2	P78314	561 aa		10.59	□□□□□ -0.71
PICALM-223	ENST00000534412	CRIPAK	Q8N1N5	446 aa		10.59	□□□□□ -0.71
PICALM-223	ENST00000534412	MAGI3	Q5TCQ9	1506 aa		10.58	□□□□□ -0.72
PICALM-223	ENST00000534412	RAPGEF2	Q9Y4G8	1499 aa		10.57	□□□□□ -0.72
PICALM-223	ENST00000534412	ZNF511	Q8NB15	262 aa		10.57	□□□□□ -0.72
PICALM-223	ENST00000534412	SMCP	P49901	116 aa	Predicted RBP	10.56	□□□□□ -0.72
PICALM-223	ENST00000534412	SKIV2L	Q15477	1246 aa	Known RBP	10.56	□□□□□ -0.72
PICALM-223	ENST00000534412	MAP10	Q9P2G4	905 aa		10.56	□□□□□ -0.72
PICALM-223	ENST00000534412	WASF2	Q9Y6W5	498 aa		10.56	□□□□□ -0.72
PICALM-223	ENST00000534412	VARS	P26640	1264 aa	Known RBP	10.55	□□□□□ -0.72
PICALM-223	ENST00000534412	RTL5	Q5HYW3	569 aa	Predicted RBP	10.55	□□□□□ -0.72
PICALM-223	ENST00000534412	FAM117A	Q9C073	453 aa		10.55	□□□□□ -0.72
PICALM-223	ENST00000534412	F12	P00748	615 aa	Predicted RBP	10.54	□□□□□ -0.72
PICALM-223	ENST00000534412	SH3D19	Q5HYK7	790 aa		10.54	□□□□□ -0.72
PICALM-223	ENST00000534412	CD109	Q6YHK3	1445 aa		10.54	□□□□□ -0.72
PICALM-223	ENST00000534412	CFAP43	Q8NDM7	1665 aa		10.53	□□□□□ -0.72
PICALM-223	ENST00000534412	PLEKHG3	A1L390	1219 aa		10.53	□□□□□ -0.72
PICALM-223	ENST00000534412	PER1	O15534	1290 aa	Predicted RBP	10.53	□□□□□ -0.72
PICALM-223	ENST00000534412	SIAH2	O43255	324 aa		10.53	□□□□□ -0.72
PICALM-223	ENST00000534412	AGER	Q15109	404 aa		10.53	□□□□□ -0.72
PICALM-223	ENST00000534412	ARMC2	Q8NEN0	867 aa		10.53	□□□□□ -0.72
PICALM-223	ENST00000534412	ABCA8	O94911	1581 aa		10.52	□□□□□ -0.72
PICALM-223	ENST00000534412	HPS1	Q92902	700 aa		10.52	□□□□□ -0.73
PICALM-223	ENST00000534412	FAM174A	Q8TBP5	190 aa		10.51	□□□□□ -0.73
PICALM-223	ENST00000534412	ARAP3	Q8WWN8	1544 aa		10.51	□□□□□ -0.73
PICALM-223	ENST00000534412	GOLGA3	Q08378	1498 aa		10.5	□□□□□ -0.73
PICALM-223	ENST00000534412	DACH1	Q9UI36	760 aa		10.5	□□□□□ -0.73
PICALM-223	ENST00000534412	KIF21B	O75037	1637 aa		10.49	□□□□□ -0.73
PICALM-223	ENST00000534412	POTEC	B2RU33	542 aa		10.49	□□□□□ -0.73
PICALM-223	ENST00000534412	NEUROD2	Q15784	382 aa		10.49	□□□□□ -0.73
PICALM-223	ENST00000534412	FBXO41	Q8TF61	875 aa		10.49	□□□□□ -0.73
PICALM-223	ENST00000534412	NBPF14	Q5TI25	921 aa		10.48	□□□□□ -0.73
PICALM-223	ENST00000534412	BPHL	Q86WA6	291 aa	Predicted RBP	10.48	□□□□□ -0.73
PICALM-223	ENST00000534412	TLL2	Q9Y6L7	1015 aa		10.48	□□□□□ -0.73
PICALM-223	ENST00000534412	C11orf95	C9JLR9	678 aa	Predicted RBP	10.47	□□□□□ -0.73
PICALM-223	ENST00000534412	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.47	□□□□□ -0.73
PICALM-223	ENST00000534412	FOXJ1	Q92949	421 aa		10.47	□□□□□ -0.73
PICALM-223	ENST00000534412	GMPR2	Q9P2T1	348 aa	Known RBP	10.47	□□□□□ -0.73
PICALM-223	ENST00000534412	CTDSPL2	Q05D32	466 aa		10.46	□□□□□ -0.73
PICALM-223	ENST00000534412	MPND	Q8N594	471 aa		10.46	□□□□□ -0.73
PICALM-223	ENST00000534412	ATP13A2	Q9NQ11	1180 aa		10.46	□□□□□ -0.73
PICALM-223	ENST00000534412	PHLDB1	Q86UU1	1377 aa		10.46	□□□□□ -0.74
PICALM-223	ENST00000534412	PTPRM	P28827	1452 aa		10.46	□□□□□ -0.74
PICALM-223	ENST00000534412	CTTNBP2	Q8WZ74	1663 aa		10.46	□□□□□ -0.74
PICALM-223	ENST00000534412	ADAMTSL3	P82987	1691 aa		10.45	□□□□□ -0.74
PICALM-223	ENST00000534412	ARID5B	Q14865	1188 aa		10.45	□□□□□ -0.74
PICALM-223	ENST00000534412	ZNF775	Q96BV0	537 aa	Predicted RBP	10.45	□□□□□ -0.74
PICALM-223	ENST00000534412	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.45	□□□□□ -0.74
PICALM-223	ENST00000534412	SENP2	Q9HC62	589 aa		10.45	□□□□□ -0.74
PICALM-223	ENST00000534412	PRX	Q9BXM0	1461 aa		10.44	□□□□□ -0.74
PICALM-223	ENST00000534412	ABCA9	Q8IUA7	1624 aa		10.44	□□□□□ -0.74
PICALM-223	ENST00000534412	CAPN5	O15484	640 aa	Predicted RBP	10.43	□□□□□ -0.74
PICALM-223	ENST00000534412	PPP2R2D	Q66LE6	453 aa		10.43	□□□□□ -0.74
PICALM-223	ENST00000534412	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	10.43	□□□□□ -0.74	6e-7	■■□□□ 12
PICALM-223	ENST00000534412	AP1G2	O75843	785 aa		10.42	□□□□□ -0.74
PICALM-223	ENST00000534412	NNT	Q13423	1086 aa		10.42	□□□□□ -0.74
PICALM-223	ENST00000534412	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.42	□□□□□ -0.74
PICALM-223	ENST00000534412	PCF11	O94913	1555 aa	Known RBP	10.42	□□□□□ -0.74
PICALM-223	ENST00000534412	ATP10B	O94823	1461 aa		10.42	□□□□□ -0.74
PICALM-223	ENST00000534412	NEO1	Q92859	1461 aa		10.42	□□□□□ -0.74
PICALM-223	ENST00000534412	LMTK3	Q96Q04	1460 aa		10.42	□□□□□ -0.74
PICALM-223	ENST00000534412	ADH1C	P00326	375 aa		10.41	□□□□□ -0.74
PICALM-223	ENST00000534412	KIFC2	Q96AC6	838 aa		10.41	□□□□□ -0.74
PICALM-223	ENST00000534412	FRMPD1	Q5SYB0	1578 aa		10.4	□□□□□ -0.74
PICALM-223	ENST00000534412	MAGEB6P1	A0A0J9YX57	407 aa		10.4	□□□□□ -0.74
PICALM-223	ENST00000534412	TPRN	Q4KMQ1	711 aa		10.4	□□□□□ -0.74
PICALM-223	ENST00000534412	LRRN4	Q8WUT4	740 aa		10.4	□□□□□ -0.74
PICALM-223	ENST00000534412	GOPC	Q9HD26	462 aa		10.4	□□□□□ -0.74
PICALM-223	ENST00000534412	PNMA1	Q8ND90	353 aa		10.39	□□□□□ -0.75

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