RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 EVA1CP58658 441 aa29.65■■■□□ 2.34
PKP3-211ENST00000534401 LTN1O94822 1766 aa29.63■■■□□ 2.33
PKP3-211ENST00000534401 FAM98CQ17RN3 349 aaKnown RBP29.63■■■□□ 2.33
PKP3-211ENST00000534401 BARGINQ6ZT62 677 aa29.63■■■□□ 2.33
PKP3-211ENST00000534401 COG3Q96JB2 828 aa29.63■■■□□ 2.33
PKP3-211ENST00000534401 KIF20BQ96Q89 1820 aa29.61■■■□□ 2.33
PKP3-211ENST00000534401 SOX12O15370 315 aa29.61■■■□□ 2.33
PKP3-211ENST00000534401 CRB1P82279 1406 aa29.61■■■□□ 2.33
PKP3-211ENST00000534401 THRAP3Q9Y2W1 955 aaKnown RBP29.6■■■□□ 2.33
PKP3-211ENST00000534401 WDR17Q8IZU2 1322 aa29.6■■■□□ 2.33
PKP3-211ENST00000534401 NSD3Q9BZ95 1437 aa29.6■■■□□ 2.33
PKP3-211ENST00000534401 ZBTB7CA1YPR0 619 aa29.58■■■□□ 2.33
PKP3-211ENST00000534401 TCP11L2Q8N4U5 519 aa29.58■■■□□ 2.33
PKP3-211ENST00000534401 EP400Q96L91 3159 aa29.57■■■□□ 2.32
PKP3-211ENST00000534401 GGNBP2Q9H3C7 697 aa29.57■■■□□ 2.32
PKP3-211ENST00000534401 KIF7Q2M1P5 1343 aa29.55■■■□□ 2.32
PKP3-211ENST00000534401 KRT27Q7Z3Y8 459 aa29.55■■■□□ 2.32
PKP3-211ENST00000534401 IP6K1Q92551 441 aa29.54■■■□□ 2.32
PKP3-211ENST00000534401 MAP3K19Q56UN5 1328 aa29.52■■■□□ 2.32
PKP3-211ENST00000534401 POLR3GLQ9BT43 218 aa29.52■■■□□ 2.32
PKP3-211ENST00000534401 CARD10Q9BWT7 1032 aa29.52■■■□□ 2.32
PKP3-211ENST00000534401 PANK3Q9H999 370 aa29.52■■■□□ 2.32
PKP3-211ENST00000534401 BLMP54132 1417 aaPredicted RBP29.52■■■□□ 2.32
PKP3-211ENST00000534401 ERBB3P21860 1342 aa29.51■■■□□ 2.32
PKP3-211ENST00000534401 CGNL1Q0VF96 1302 aa29.51■■■□□ 2.32
PKP3-211ENST00000534401 PARP4Q9UKK3 1724 aaKnown RBP29.51■■■□□ 2.31
PKP3-211ENST00000534401 FBLN1P23142 703 aa29.5■■■□□ 2.31
PKP3-211ENST00000534401 USP35Q9P2H5 1018 aa29.5■■■□□ 2.31
PKP3-211ENST00000534401 TOM1L2Q6ZVM7 507 aa29.49■■■□□ 2.31
PKP3-211ENST00000534401 CCDC125Q86Z20 511 aa29.48■■■□□ 2.31
PKP3-211ENST00000534401 WNK3Q9BYP7 1800 aa29.48■■■□□ 2.31
PKP3-211ENST00000534401 RTL1A6NKG5 1358 aa29.47■■■□□ 2.31
PKP3-211ENST00000534401 ANKRD26Q9UPS8 1709 aa29.46■■■□□ 2.31
PKP3-211ENST00000534401 DISP2A7MBM2 1401 aa29.45■■■□□ 2.31
PKP3-211ENST00000534401 KIF24Q5T7B8 1368 aa29.45■■■□□ 2.31
PKP3-211ENST00000534401 CCDC7Q96M83 1385 aa29.45■■■□□ 2.31
PKP3-211ENST00000534401 HOXC9P31274 260 aa29.45■■■□□ 2.31
PKP3-211ENST00000534401 A0A0G2JS52 829 aa29.44■■■□□ 2.3
PKP3-211ENST00000534401 MYT1Q01538 1121 aa29.44■■■□□ 2.3
PKP3-211ENST00000534401 ANKRD24Q8TF21 1146 aa29.44■■■□□ 2.3
PKP3-211ENST00000534401 CDCA7Q9BWT1 371 aaPredicted RBP29.43■■■□□ 2.3
PKP3-211ENST00000534401 FAM208AQ9UK61 1670 aaKnown RBP29.42■■■□□ 2.3
PKP3-211ENST00000534401 CSB-PGBD3P0DP91 1061 aa29.42■■■□□ 2.3
PKP3-211ENST00000534401 RRS1Q15050 365 aaKnown RBP29.42■■■□□ 2.3
PKP3-211ENST00000534401 NSD2O96028 1365 aa29.41■■■□□ 2.3
PKP3-211ENST00000534401 PEAK1Q9H792 1746 aa29.41■■■□□ 2.3
PKP3-211ENST00000534401 WASHC2AQ641Q2 1341 aa29.41■■■□□ 2.3
PKP3-211ENST00000534401 AMPHP49418 695 aa29.4■■■□□ 2.3
PKP3-211ENST00000534401 MAP2P11137 1827 aaKnown RBP29.39■■■□□ 2.3
PKP3-211ENST00000534401 PER1O15534 1290 aaPredicted RBP29.39■■■□□ 2.3
PKP3-211ENST00000534401 LRRC37A3O60309 1634 aa29.38■■■□□ 2.29
PKP3-211ENST00000534401 INSRP06213 1382 aa29.37■■■□□ 2.29
PKP3-211ENST00000534401 NLRP2Q9NX02 1062 aa29.36■■■□□ 2.29
PKP3-211ENST00000534401 FLT4P35916 1363 aa29.36■■■□□ 2.29
PKP3-211ENST00000534401 PDE3BQ13370 1112 aa29.35■■■□□ 2.29
PKP3-211ENST00000534401 AMER1Q5JTC6 1135 aaPredicted RBP29.35■■■□□ 2.29
PKP3-211ENST00000534401 FAM182BQ5T319 152 aa29.35■■■□□ 2.29
PKP3-211ENST00000534401 FAM196AQ6ZSG2 479 aa29.34■■■□□ 2.29
PKP3-211ENST00000534401 KNSTRNQ9Y448 316 aa29.33■■■□□ 2.29
PKP3-211ENST00000534401 EMILIN1Q9Y6C2 1016 aa29.33■■■□□ 2.29
PKP3-211ENST00000534401 RGPD2P0DJD1 1756 aa29.33■■■□□ 2.29
PKP3-211ENST00000534401 DDB1Q16531 1140 aa29.32■■■□□ 2.28
PKP3-211ENST00000534401 HSP90AB2PQ58FF8 381 aa29.32■■■□□ 2.28
PKP3-211ENST00000534401 POLKQ9UBT6 870 aa29.32■■■□□ 2.28
PKP3-211ENST00000534401 BCL9O00512 1426 aa29.31■■■□□ 2.28
PKP3-211ENST00000534401 RGPD1P0DJD0 1748 aa29.3■■■□□ 2.28
PKP3-211ENST00000534401 LTV1Q96GA3 475 aaPredicted RBP29.29■■■□□ 2.28
PKP3-211ENST00000534401 IL2RBP14784 551 aa29.28■■■□□ 2.28
PKP3-211ENST00000534401 MARCH10Q8NA82 808 aaPredicted RBP29.27■■■□□ 2.28
PKP3-211ENST00000534401 TNS1Q9HBL0 1735 aaKnown RBP29.27■■■□□ 2.28
PKP3-211ENST00000534401 TNS2Q63HR2 1409 aa29.27■■■□□ 2.28
PKP3-211ENST00000534401 SMG6Q86US8 1419 aaKnown RBP29.27■■■□□ 2.28
PKP3-211ENST00000534401 NPC1L1Q9UHC9 1359 aa29.26■■■□□ 2.28
PKP3-211ENST00000534401 EXOC5O00471 708 aa29.26■■■□□ 2.27
PKP3-211ENST00000534401 NBPF6Q5VWK0 638 aa29.26■■■□□ 2.27
PKP3-211ENST00000534401 NBPF4Q96M43 638 aa29.26■■■□□ 2.27
PKP3-211ENST00000534401 SBF2Q86WG5 1849 aa29.26■■■□□ 2.27
PKP3-211ENST00000534401 OVOS2A0A0G2JMS6 1433 aa29.26■■■□□ 2.27
PKP3-211ENST00000534401 NCAPD2Q15021 1401 aa29.25■■■□□ 2.27
PKP3-211ENST00000534401 MORC1Q86VD1 984 aa29.22■■■□□ 2.27
PKP3-211ENST00000534401 SF3B2Q13435 895 aaKnown RBP29.21■■■□□ 2.27
PKP3-211ENST00000534401 DEFB132Q7Z7B7 95 aa29.2■■■□□ 2.26
PKP3-211ENST00000534401 TRIM37O94972 964 aa29.19■■■□□ 2.26
PKP3-211ENST00000534401 TNNT2P45379 298 aaPredicted RBP29.18■■■□□ 2.26
PKP3-211ENST00000534401 BAG6P46379 1132 aa29.17■■■□□ 2.26
PKP3-211ENST00000534401 MEGF6O75095 1541 aa29.16■■■□□ 2.26
PKP3-211ENST00000534401 PPM1GO15355 546 aaPredicted RBP29.16■■■□□ 2.26
PKP3-211ENST00000534401 SHANK3Q9BYB0 1731 aa29.14■■■□□ 2.26
PKP3-211ENST00000534401 EIF4A2Q14240 407 aaKnown RBP29.13■■■□□ 2.25
PKP3-211ENST00000534401 EYA1Q99502 592 aa29.13■■■□□ 2.25
PKP3-211ENST00000534401 USHBP1Q8N6Y0 703 aa29.12■■■□□ 2.25
PKP3-211ENST00000534401 CAMKK2Q96RR4 588 aa29.12■■■□□ 2.25
PKP3-211ENST00000534401 BCL11BQ9C0K0 894 aaPredicted RBP29.11■■■□□ 2.25
PKP3-211ENST00000534401 ZCRB1Q8TBF4 217 aaKnown RBP29.1■■■□□ 2.25
PKP3-211ENST00000534401 EN1Q05925 392 aaPredicted RBP29.09■■■□□ 2.25
PKP3-211ENST00000534401 PARD3Q8TEW0 1356 aa29.09■■■□□ 2.25
PKP3-211ENST00000534401 APBA3O96018 575 aa29.08■■■□□ 2.25
PKP3-211ENST00000534401 ZEB1P37275 1124 aaPredicted RBP29.08■■■□□ 2.25
PKP3-211ENST00000534401 RAPGEF4Q8WZA2 1011 aa29.08■■■□□ 2.25
PKP3-211ENST00000534401 RGPD3A6NKT7 1758 aaPredicted RBP29.07■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms