RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 BCL2L13Q9BXK5 485 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 RRAGDQ9NQL2 400 aaPredicted RBP5.63□□□□□ -1.51
CTSC-208ENST00000533897 CRB1P82279 1406 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 FCHSD2O94868 740 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 DDX19BQ9UMR2 479 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 ADAMTS13Q76LX8 1427 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 RIMS2Q9UQ26 1411 aa5.63□□□□□ -1.51
CTSC-208ENST00000533897 SIRT1Q96EB6 747 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 IL17RAQ96F46 866 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 USP31Q70CQ4 1352 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 CD2BP2O95400 341 aaKnown RBP5.62□□□□□ -1.51
CTSC-208ENST00000533897 BMP2KLQ5H9B9 411 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 PHACTR3Q96KR7 559 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 LMO7Q8WWI1 1683 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 XRCC6P12956 609 aaKnown RBP eCLIP5.62□□□□□ -1.51
CTSC-208ENST00000533897 MCM4P33991 863 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 METP08581 1390 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 CFAP53Q96M91 514 aa5.62□□□□□ -1.51
CTSC-208ENST00000533897 CYP2E1P05181 493 aaPredicted RBP5.61□□□□□ -1.51
CTSC-208ENST00000533897 PRAM1Q96QH2 718 aa5.61□□□□□ -1.51
CTSC-208ENST00000533897 C22orf23Q9BZE7 217 aa5.61□□□□□ -1.51
CTSC-208ENST00000533897 GGNBP2Q9H3C7 697 aa5.61□□□□□ -1.51
CTSC-208ENST00000533897 SLIT1O75093 1534 aa5.61□□□□□ -1.51
CTSC-208ENST00000533897 IBTKQ9P2D0 1353 aaPredicted RBP5.61□□□□□ -1.51
CTSC-208ENST00000533897 LTN1O94822 1766 aa5.61□□□□□ -1.51
CTSC-208ENST00000533897 CHD2O14647 1828 aaKnown RBP5.61□□□□□ -1.51
CTSC-208ENST00000533897 TNNT2P45379 298 aaPredicted RBP5.61□□□□□ -1.51
CTSC-208ENST00000533897 U2AF1L5P0DN76 240 aaPredicted RBP5.61□□□□□ -1.51
CTSC-208ENST00000533897 U2AF1Q01081 240 aaKnown RBP eCLIP5.61□□□□□ -1.51
CTSC-208ENST00000533897 RAB3GAP1Q15042 981 aa5.61□□□□□ -1.51
CTSC-208ENST00000533897 GGT6Q6P531 493 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 TSPYL6Q8N831 410 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 CDK19Q9BWU1 502 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 IFT57Q9NWB7 429 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 PPP6R1Q9UPN7 881 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 ARHGAP23Q9P227 1491 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 SALL3Q9BXA9 1300 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 GSPT1P15170 499 aaKnown RBP5.6□□□□□ -1.51
CTSC-208ENST00000533897 CHD1LQ86WJ1 897 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 KIAA0232Q92628 1395 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 CEP170BQ9Y4F5 1589 aaPredicted RBP5.6□□□□□ -1.51
CTSC-208ENST00000533897 BECN1Q14457 450 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 NEUROD2Q15784 382 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 NFE2L2Q16236 605 aa5.6□□□□□ -1.51
CTSC-208ENST00000533897 RGPD2P0DJD1 1756 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 RTL1A6NKG5 1358 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 KDRP35968 1356 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 DIAPH1O60610 1272 aaKnown RBP5.59□□□□□ -1.51
CTSC-208ENST00000533897 RIPK4P57078 832 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 SMC4Q9NTJ3 1288 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 PTPRUQ92729 1446 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 PRR36Q9H6K5 1346 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 FBXO31Q5XUX0 539 aaPredicted RBP5.59□□□□□ -1.51
CTSC-208ENST00000533897 MBIPQ9NS73 344 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 ERBB4Q15303 1308 aa5.59□□□□□ -1.51
CTSC-208ENST00000533897 NUTM2DQ5VT03 806 aaPredicted RBP5.59□□□□□ -1.52
CTSC-208ENST00000533897 INTS3Q68E01 1043 aaKnown RBP5.59□□□□□ -1.52
CTSC-208ENST00000533897 CABP1Q9NZU7 370 aa5.59□□□□□ -1.52
CTSC-208ENST00000533897 CHMP5Q9NZZ3 219 aa5.59□□□□□ -1.52
CTSC-208ENST00000533897 GCC1Q96CN9 775 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 TERF2IPQ9NYB0 399 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 CIZ1Q9ULV3 898 aaPredicted RBP5.58□□□□□ -1.52
CTSC-208ENST00000533897 PXDNLA1KZ92 1463 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 LMTK3Q96Q04 1460 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 GAS2L3Q86XJ1 694 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 RTN4Q9NQC3 1192 aaKnown RBP5.58□□□□□ -1.52
CTSC-208ENST00000533897 CFAP44Q96MT7 982 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 PANK2Q9BZ23 570 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 SLKQ9H2G2 1235 aaPredicted RBP5.58□□□□□ -1.52
CTSC-208ENST00000533897 ARHGEF10O15013 1369 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 USP6P35125 1406 aa5.58□□□□□ -1.52
CTSC-208ENST00000533897 FBLN1P23142 703 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 TBC1D9Q6ZT07 1266 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 C8orf58Q8NAV2 365 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 ROBO2Q9HCK4 1378 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 PRKAR2BP31323 418 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 PLEKHM2Q8IWE5 1019 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 TNPO1Q92973 898 aaKnown RBP5.57□□□□□ -1.52
CTSC-208ENST00000533897 DCTPP1Q9H773 170 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 ISY1Q9ULR0 285 aaKnown RBP5.57□□□□□ -1.52
CTSC-208ENST00000533897 DDX60Q8IY21 1712 aaKnown RBP5.57□□□□□ -1.52
CTSC-208ENST00000533897 MINK1Q8N4C8 1332 aaPredicted RBP5.57□□□□□ -1.52
CTSC-208ENST00000533897 PRKCSHP14314 528 aaPredicted RBP5.57□□□□□ -1.52
CTSC-208ENST00000533897 CLCN1P35523 988 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 NCAPD2Q15021 1401 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 NFAT5O94916 1531 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 OSCARQ8IYS5 282 aa5.57□□□□□ -1.52
CTSC-208ENST00000533897 WASLO00401 505 aaPredicted RBP5.56□□□□□ -1.52
CTSC-208ENST00000533897 TRAK2O60296 914 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 GLI3P10071 1580 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 ITPRIPQ8IWB1 547 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 MYH15Q9Y2K3 1946 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 EMILIN1Q9Y6C2 1016 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 ZNF142P52746 1687 aaPredicted RBP5.56□□□□□ -1.52
CTSC-208ENST00000533897 CHL1O00533 1208 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 CANXP27824 592 aaKnown RBP5.56□□□□□ -1.52
CTSC-208ENST00000533897 ZRANB1Q9UGI0 708 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 L1TD1Q5T7N2 865 aaKnown RBP5.56□□□□□ -1.52
CTSC-208ENST00000533897 WAPLQ7Z5K2 1190 aa5.56□□□□□ -1.52
CTSC-208ENST00000533897 FTSJ3Q8IY81 847 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms