RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
CHKA-207ENST00000533728 PDGFDQ9GZP0 370 aaPredicted RBP12.81□□□□□ -0.36
CHKA-207ENST00000533728 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
CHKA-207ENST00000533728 CNGB1Q14028 1251 aaPredicted RBP12.8□□□□□ -0.36
CHKA-207ENST00000533728 KLRG1Q96E93 195 aa12.8□□□□□ -0.36
CHKA-207ENST00000533728 KIF20BQ96Q89 1820 aa12.8□□□□□ -0.36
CHKA-207ENST00000533728 METP08581 1390 aa12.8□□□□□ -0.36
CHKA-207ENST00000533728 MAP3K5Q99683 1374 aa12.8□□□□□ -0.36
CHKA-207ENST00000533728 YTHDC2Q9H6S0 1430 aaKnown RBP12.79□□□□□ -0.36
CHKA-207ENST00000533728 PXDNQ92626 1479 aa12.79□□□□□ -0.36
CHKA-207ENST00000533728 WDR43Q15061 677 aaKnown RBP eCLIP12.79□□□□□ -0.36
CHKA-207ENST00000533728 TRAK1Q9UPV9 953 aa12.79□□□□□ -0.36
CHKA-207ENST00000533728 NPHP3Q7Z494 1330 aa12.79□□□□□ -0.36
CHKA-207ENST00000533728 PDE4DIPQ5VU43 2346 aa12.79□□□□□ -0.36
CHKA-207ENST00000533728 THSD7AQ9UPZ6 1657 aa12.79□□□□□ -0.36
CHKA-207ENST00000533728 ZNF526Q8TF50 670 aaPredicted RBP12.78□□□□□ -0.36
CHKA-207ENST00000533728 CARD14Q9BXL6 1004 aa12.78□□□□□ -0.36
CHKA-207ENST00000533728 NSD3Q9BZ95 1437 aa12.78□□□□□ -0.36
CHKA-207ENST00000533728 NCBP3Q53F19 620 aaKnown RBP12.77□□□□□ -0.37
CHKA-207ENST00000533728 CGNL1Q0VF96 1302 aa12.77□□□□□ -0.37
CHKA-207ENST00000533728 ABCC11Q96J66 1382 aa12.77□□□□□ -0.37
CHKA-207ENST00000533728 SIRT1Q96EB6 747 aa12.76□□□□□ -0.37
CHKA-207ENST00000533728 ANO8Q9HCE9 1232 aaPredicted RBP12.76□□□□□ -0.37
CHKA-207ENST00000533728 RCAN3Q9UKA8 241 aa12.76□□□□□ -0.37
CHKA-207ENST00000533728 ADAMTS8Q9UP79 889 aa12.76□□□□□ -0.37
CHKA-207ENST00000533728 ZNF521Q96K83 1311 aa12.76□□□□□ -0.37
CHKA-207ENST00000533728 NRAPQ86VF7 1730 aa12.76□□□□□ -0.37
CHKA-207ENST00000533728 HAP1P54257 671 aaPredicted RBP12.75□□□□□ -0.37
CHKA-207ENST00000533728 XPCQ01831 940 aaPredicted RBP12.75□□□□□ -0.37
CHKA-207ENST00000533728 TMEM132EQ6IEE7 984 aa12.75□□□□□ -0.37
CHKA-207ENST00000533728 ARXQ96QS3 562 aa12.75□□□□□ -0.37
CHKA-207ENST00000533728 RRP1P56182 461 aaKnown RBP12.74□□□□□ -0.37
CHKA-207ENST00000533728 SGIP1Q9BQI5 828 aa12.74□□□□□ -0.37
CHKA-207ENST00000533728 IRX6P78412 446 aaPredicted RBP12.73□□□□□ -0.37
CHKA-207ENST00000533728 MTFR1LQ9H019 292 aa12.72□□□□□ -0.37
CHKA-207ENST00000533728 ATP7BP35670 1465 aa12.72□□□□□ -0.37
CHKA-207ENST00000533728 RGPD3A6NKT7 1758 aaPredicted RBP12.71□□□□□ -0.37
CHKA-207ENST00000533728 AKAP12Q02952 1782 aa12.71□□□□□ -0.37
CHKA-207ENST00000533728 RGPD4Q7Z3J3 1758 aa12.71□□□□□ -0.37
CHKA-207ENST00000533728 KIF3CO14782 793 aa12.71□□□□□ -0.37
CHKA-207ENST00000533728 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
CHKA-207ENST00000533728 PLEKHH1Q9ULM0 1364 aa12.7□□□□□ -0.38
CHKA-207ENST00000533728 MORC1Q86VD1 984 aa12.7□□□□□ -0.38
CHKA-207ENST00000533728 TRMT2AQ8IZ69 625 aaKnown RBP12.7□□□□□ -0.38
CHKA-207ENST00000533728 SLC12A5Q9H2X9 1139 aa12.7□□□□□ -0.38
CHKA-207ENST00000533728 ITSN1Q15811 1721 aa12.7□□□□□ -0.38
CHKA-207ENST00000533728 MON2Q7Z3U7 1717 aa12.7□□□□□ -0.38
CHKA-207ENST00000533728 ADCY9O60503 1353 aa12.69□□□□□ -0.38
CHKA-207ENST00000533728 ROBO2Q9HCK4 1378 aa12.69□□□□□ -0.38
CHKA-207ENST00000533728 CDC42BPGQ6DT37 1551 aa12.69□□□□□ -0.38
CHKA-207ENST00000533728 FOXO3O43524 673 aa12.69□□□□□ -0.38
CHKA-207ENST00000533728 HSPA1AP0DMV8 641 aaKnown RBP12.69□□□□□ -0.38
CHKA-207ENST00000533728 HSPA1BP0DMV9 641 aaKnown RBP12.69□□□□□ -0.38
CHKA-207ENST00000533728 HTRA3P83110 453 aa12.69□□□□□ -0.38
CHKA-207ENST00000533728 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
CHKA-207ENST00000533728 FMN2Q9NZ56 1722 aa12.68□□□□□ -0.38
CHKA-207ENST00000533728 CD163L1Q9NR16 1453 aa12.68□□□□□ -0.38
CHKA-207ENST00000533728 CFAP53Q96M91 514 aa12.68□□□□□ -0.38
CHKA-207ENST00000533728 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
CHKA-207ENST00000533728 SPATA31A5Q5VU36 1347 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 SPATA31A7Q8IWB4 1347 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 RGPD8O14715 1765 aaPredicted RBP12.67□□□□□ -0.38
CHKA-207ENST00000533728 SLFN5Q08AF3 891 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 ESCO1Q5FWF5 840 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 DUSP27Q5VZP5 1158 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 CCDC136Q96JN2 1154 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 BCL11BQ9C0K0 894 aaPredicted RBP12.67□□□□□ -0.38
CHKA-207ENST00000533728 ABCA3Q99758 1704 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
CHKA-207ENST00000533728 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
CHKA-207ENST00000533728 SPATA31A3Q5VYP0 1347 aa12.66□□□□□ -0.38
CHKA-207ENST00000533728 MLLT1Q03111 559 aaPredicted RBP12.66□□□□□ -0.38
CHKA-207ENST00000533728 B4GALNT3Q6L9W6 998 aa12.66□□□□□ -0.38
CHKA-207ENST00000533728 CDCA7LQ96GN5 454 aa12.66□□□□□ -0.38
CHKA-207ENST00000533728 POGKQ9P215 609 aa12.66□□□□□ -0.38
CHKA-207ENST00000533728 RBM19Q9Y4C8 960 aaKnown RBP12.66□□□□□ -0.38
CHKA-207ENST00000533728 E9PSI1 815 aa12.65□□□□□ -0.38
CHKA-207ENST00000533728 CCDC27Q2M243 656 aa12.65□□□□□ -0.38
CHKA-207ENST00000533728 CABLES1Q8TDN4 633 aa12.65□□□□□ -0.38
CHKA-207ENST00000533728 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
CHKA-207ENST00000533728 COL3A1P02461 1466 aaPredicted RBP12.65□□□□□ -0.38
CHKA-207ENST00000533728 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
CHKA-207ENST00000533728 TOMM70O94826 608 aa12.64□□□□□ -0.39
CHKA-207ENST00000533728 PLEKHG5O94827 1062 aa12.64□□□□□ -0.39
CHKA-207ENST00000533728 YBX3P16989 372 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHKA-207ENST00000533728 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.64□□□□□ -0.39
CHKA-207ENST00000533728 RUNDC1Q96C34 613 aa12.64□□□□□ -0.39
CHKA-207ENST00000533728 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
CHKA-207ENST00000533728 SRPK2P78362 688 aaKnown RBP12.63□□□□□ -0.39
CHKA-207ENST00000533728 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
CHKA-207ENST00000533728 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
CHKA-207ENST00000533728 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
CHKA-207ENST00000533728 APAF1O14727 1248 aa12.62□□□□□ -0.39
CHKA-207ENST00000533728 STK26Q9P289 416 aa12.62□□□□□ -0.39
CHKA-207ENST00000533728 SALL2Q9Y467 1007 aaPredicted RBP12.62□□□□□ -0.39
CHKA-207ENST00000533728 MTHFSP49914 203 aa12.61□□□□□ -0.39
CHKA-207ENST00000533728 WDR63Q8IWG1 891 aa12.61□□□□□ -0.39
CHKA-207ENST00000533728 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
CHKA-207ENST00000533728 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms