RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 CSB-PGBD3P0DP91 1061 aa17.49■□□□□ 0.39
CAPRIN1-213ENST00000533562 CDCA7Q9BWT1 371 aaPredicted RBP17.49■□□□□ 0.39
CAPRIN1-213ENST00000533562 DISP2A7MBM2 1401 aa17.48■□□□□ 0.39
CAPRIN1-213ENST00000533562 EZH2Q15910 746 aaKnown RBP17.47■□□□□ 0.39
CAPRIN1-213ENST00000533562 DDB1Q16531 1140 aa17.47■□□□□ 0.39
CAPRIN1-213ENST00000533562 CAMKK2Q96RR4 588 aa17.47■□□□□ 0.39
CAPRIN1-213ENST00000533562 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
CAPRIN1-213ENST00000533562 PSDA5PKW4 1024 aaPredicted RBP17.46■□□□□ 0.39
CAPRIN1-213ENST00000533562 NME9Q86XW9 330 aa17.46■□□□□ 0.39
CAPRIN1-213ENST00000533562 TESK2Q96S53 571 aa17.46■□□□□ 0.39
CAPRIN1-213ENST00000533562 CARD10Q9BWT7 1032 aa17.46■□□□□ 0.39
CAPRIN1-213ENST00000533562 PARD3Q8TEW0 1356 aa17.45■□□□□ 0.38
CAPRIN1-213ENST00000533562 COL18A1P39060 1754 aa17.45■□□□□ 0.38
CAPRIN1-213ENST00000533562 CD163L1Q9NR16 1453 aa17.44■□□□□ 0.38
CAPRIN1-213ENST00000533562 NINLQ9Y2I6 1382 aa17.44■□□□□ 0.38
CAPRIN1-213ENST00000533562 EDC4Q6P2E9 1401 aaKnown RBP17.44■□□□□ 0.38
CAPRIN1-213ENST00000533562 MON2Q7Z3U7 1717 aa17.43■□□□□ 0.38
CAPRIN1-213ENST00000533562 PARP4Q9UKK3 1724 aaKnown RBP17.42■□□□□ 0.38
CAPRIN1-213ENST00000533562 EXOC5O00471 708 aa17.42■□□□□ 0.38
CAPRIN1-213ENST00000533562 R3HDM1Q15032 1099 aaKnown RBP17.42■□□□□ 0.38
CAPRIN1-213ENST00000533562 TIMELESSQ9UNS1 1208 aa17.42■□□□□ 0.38
CAPRIN1-213ENST00000533562 NFAT5O94916 1531 aa17.42■□□□□ 0.38
CAPRIN1-213ENST00000533562 A0A1W2PP64 1363 aa17.41■□□□□ 0.38
CAPRIN1-213ENST00000533562 TNS1Q9HBL0 1735 aaKnown RBP17.41■□□□□ 0.38
CAPRIN1-213ENST00000533562 OVOS2A0A0G2JMS6 1433 aa17.41■□□□□ 0.38
CAPRIN1-213ENST00000533562 OVOS2A0A0J9YW53 1432 aa17.41■□□□□ 0.38
CAPRIN1-213ENST00000533562 OVOS2Q6IE36 1432 aa17.41■□□□□ 0.38
CAPRIN1-213ENST00000533562 TMF1P82094 1093 aa17.41■□□□□ 0.38
CAPRIN1-213ENST00000533562 NBPF14Q5TI25 921 aa17.41■□□□□ 0.38
CAPRIN1-213ENST00000533562 CCDC7Q96M83 1385 aa17.4■□□□□ 0.38
CAPRIN1-213ENST00000533562 ABCC6O95255 1503 aa17.39■□□□□ 0.37
CAPRIN1-213ENST00000533562 NLRP2Q9NX02 1062 aa17.39■□□□□ 0.37
CAPRIN1-213ENST00000533562 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
CAPRIN1-213ENST00000533562 MARCH10Q8NA82 808 aaPredicted RBP17.38■□□□□ 0.37
CAPRIN1-213ENST00000533562 COG3Q96JB2 828 aa17.38■□□□□ 0.37
CAPRIN1-213ENST00000533562 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
CAPRIN1-213ENST00000533562 ERBB3P21860 1342 aa17.38■□□□□ 0.37
CAPRIN1-213ENST00000533562 RGPD5Q99666 1765 aa17.38■□□□□ 0.37
CAPRIN1-213ENST00000533562 PLSCR1O15162 318 aa17.37■□□□□ 0.37
CAPRIN1-213ENST00000533562 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
CAPRIN1-213ENST00000533562 CLSPNQ9HAW4 1339 aa17.37■□□□□ 0.37
CAPRIN1-213ENST00000533562 USP47Q96K76 1375 aa17.37■□□□□ 0.37
CAPRIN1-213ENST00000533562 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
CAPRIN1-213ENST00000533562 IP6K1Q92551 441 aa17.35■□□□□ 0.37
CAPRIN1-213ENST00000533562 USP54Q70EL1 1684 aa17.35■□□□□ 0.37
CAPRIN1-213ENST00000533562 BCL9O00512 1426 aa17.34■□□□□ 0.37
CAPRIN1-213ENST00000533562 LRRC37A3O60309 1634 aa17.34■□□□□ 0.37
CAPRIN1-213ENST00000533562 ANKRD36BQ8N2N9 1353 aa17.33■□□□□ 0.36
CAPRIN1-213ENST00000533562 IL2RBP14784 551 aa17.33■□□□□ 0.36
CAPRIN1-213ENST00000533562 PEAK1Q9H792 1746 aa17.33■□□□□ 0.36
CAPRIN1-213ENST00000533562 LRP5O75197 1615 aa17.32■□□□□ 0.36
CAPRIN1-213ENST00000533562 AMPHP49418 695 aa17.31■□□□□ 0.36
CAPRIN1-213ENST00000533562 LTN1O94822 1766 aa17.3■□□□□ 0.36
CAPRIN1-213ENST00000533562 PTF1AQ7RTS3 328 aa17.3■□□□□ 0.36
CAPRIN1-213ENST00000533562 LTV1Q96GA3 475 aaPredicted RBP17.3■□□□□ 0.36
CAPRIN1-213ENST00000533562 SBF2Q86WG5 1849 aa17.29■□□□□ 0.36
CAPRIN1-213ENST00000533562 WNK3Q9BYP7 1800 aa17.29■□□□□ 0.36
CAPRIN1-213ENST00000533562 FYB1O15117 783 aa17.29■□□□□ 0.36
CAPRIN1-213ENST00000533562 MAP3K19Q56UN5 1328 aa17.28■□□□□ 0.36
CAPRIN1-213ENST00000533562 HOXC9P31274 260 aa17.28■□□□□ 0.36
CAPRIN1-213ENST00000533562 RREB1Q92766 1687 aa17.28■□□□□ 0.36
CAPRIN1-213ENST00000533562 TNS2Q63HR2 1409 aa17.28■□□□□ 0.36
CAPRIN1-213ENST00000533562 FBLN1P23142 703 aa17.27■□□□□ 0.36
CAPRIN1-213ENST00000533562 GGNBP2Q9H3C7 697 aa17.27■□□□□ 0.36
CAPRIN1-213ENST00000533562 KCNQ2O43526 872 aa17.26■□□□□ 0.35
CAPRIN1-213ENST00000533562 PROM2Q8N271 834 aa17.26■□□□□ 0.35
CAPRIN1-213ENST00000533562 NUP188Q5SRE5 1749 aa17.25■□□□□ 0.35
CAPRIN1-213ENST00000533562 ACSBG1Q96GR2 724 aa17.25■□□□□ 0.35
CAPRIN1-213ENST00000533562 KAT6BQ8WYB5 2073 aa17.25■□□□□ 0.35
CAPRIN1-213ENST00000533562 RRS1Q15050 365 aaKnown RBP17.24■□□□□ 0.35
CAPRIN1-213ENST00000533562 TXNRD1Q16881 649 aa17.24■□□□□ 0.35
CAPRIN1-213ENST00000533562 DDX54Q8TDD1 881 aaKnown RBP17.24■□□□□ 0.35
CAPRIN1-213ENST00000533562 SPON1Q9HCB6 807 aa17.24■□□□□ 0.35
CAPRIN1-213ENST00000533562 RGPD3A6NKT7 1758 aaPredicted RBP17.24■□□□□ 0.35
CAPRIN1-213ENST00000533562 RGPD4Q7Z3J3 1758 aa17.24■□□□□ 0.35
CAPRIN1-213ENST00000533562 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
CAPRIN1-213ENST00000533562 RTL1A6NKG5 1358 aa17.22■□□□□ 0.35
CAPRIN1-213ENST00000533562 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
CAPRIN1-213ENST00000533562 STK32BQ9NY57 414 aa17.21■□□□□ 0.35
CAPRIN1-213ENST00000533562 ZCRB1Q8TBF4 217 aaKnown RBP17.2■□□□□ 0.34
CAPRIN1-213ENST00000533562 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
CAPRIN1-213ENST00000533562 PPP1R1BQ9UD71 204 aaPredicted RBP17.2■□□□□ 0.34
CAPRIN1-213ENST00000533562 NBPF6Q5VWK0 638 aa17.19■□□□□ 0.34
CAPRIN1-213ENST00000533562 NBPF4Q96M43 638 aa17.19■□□□□ 0.34
CAPRIN1-213ENST00000533562 SMG6Q86US8 1419 aaKnown RBP17.19■□□□□ 0.34
CAPRIN1-213ENST00000533562 FAM208AQ9UK61 1670 aaKnown RBP17.19■□□□□ 0.34
CAPRIN1-213ENST00000533562 EIF4G2P78344 907 aaKnown RBP eCLIP17.18■□□□□ 0.34
CAPRIN1-213ENST00000533562 SLC15A2Q16348 729 aa17.18■□□□□ 0.34
CAPRIN1-213ENST00000533562 CGNL1Q0VF96 1302 aa17.18■□□□□ 0.34
CAPRIN1-213ENST00000533562 KIF24Q5T7B8 1368 aa17.17■□□□□ 0.34
CAPRIN1-213ENST00000533562 HSP90AB2PQ58FF8 381 aa17.17■□□□□ 0.34
CAPRIN1-213ENST00000533562 RAPGEF4Q8WZA2 1011 aa17.17■□□□□ 0.34
CAPRIN1-213ENST00000533562 POLR3GLQ9BT43 218 aa17.17■□□□□ 0.34
CAPRIN1-213ENST00000533562 INSRP06213 1382 aa17.16■□□□□ 0.34
CAPRIN1-213ENST00000533562 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
CAPRIN1-213ENST00000533562 NHSQ6T4R5 1651 aa17.16■□□□□ 0.34
CAPRIN1-213ENST00000533562 FLT4P35916 1363 aa17.15■□□□□ 0.34
CAPRIN1-213ENST00000533562 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
CAPRIN1-213ENST00000533562 TATP17735 454 aaPredicted RBP17.14■□□□□ 0.33
CAPRIN1-213ENST00000533562 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms