RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 DLG5Q8TDM6 1919 aa20.78■□□□□ 0.92
CTSB-228ENST00000533455 KIF2CQ99661 725 aa20.78■□□□□ 0.92
CTSB-228ENST00000533455 POLKQ9UBT6 870 aa20.78■□□□□ 0.92
CTSB-228ENST00000533455 SETD1AO15047 1707 aaKnown RBP20.78■□□□□ 0.92
CTSB-228ENST00000533455 PANK2Q9BZ23 570 aa20.78■□□□□ 0.92
CTSB-228ENST00000533455 CABP1Q9NZU7 370 aa20.78■□□□□ 0.92
CTSB-228ENST00000533455 RAB3GAP1Q15042 981 aa20.77■□□□□ 0.92
CTSB-228ENST00000533455 IFT57Q9NWB7 429 aa20.77■□□□□ 0.92
CTSB-228ENST00000533455 CDK12Q9NYV4 1490 aaPredicted RBP20.77■□□□□ 0.92
CTSB-228ENST00000533455 TNPO1Q92973 898 aaKnown RBP20.77■□□□□ 0.91
CTSB-228ENST00000533455 YEATS2Q9ULM3 1422 aa20.77■□□□□ 0.91
CTSB-228ENST00000533455 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
CTSB-228ENST00000533455 ZNF853P0CG23 659 aa20.76■□□□□ 0.91
CTSB-228ENST00000533455 PTMSP20962 102 aa20.76■□□□□ 0.91
CTSB-228ENST00000533455 GNAI1P63096 354 aa20.76■□□□□ 0.91
CTSB-228ENST00000533455 ANKRD45Q5TZF3 282 aa20.76■□□□□ 0.91
CTSB-228ENST00000533455 GBP4Q96PP9 640 aa20.75■□□□□ 0.91
CTSB-228ENST00000533455 GRPEL1Q9HAV7 217 aa20.75■□□□□ 0.91
CTSB-228ENST00000533455 KIF24Q5T7B8 1368 aa20.74■□□□□ 0.91
CTSB-228ENST00000533455 CLCN1P35523 988 aa20.73■□□□□ 0.91
CTSB-228ENST00000533455 TBC1D9Q6ZT07 1266 aa20.73■□□□□ 0.91
CTSB-228ENST00000533455 PHACTR3Q96KR7 559 aa20.73■□□□□ 0.91
CTSB-228ENST00000533455 ARXQ96QS3 562 aa20.73■□□□□ 0.91
CTSB-228ENST00000533455 KNDC1Q76NI1 1749 aa20.73■□□□□ 0.91
CTSB-228ENST00000533455 EIF5BO60841 1220 aaKnown RBP20.73■□□□□ 0.91
CTSB-228ENST00000533455 SKOR2Q2VWA4 1001 aaPredicted RBP20.72■□□□□ 0.91
CTSB-228ENST00000533455 SIRT2Q8IXJ6 389 aa20.72■□□□□ 0.91
CTSB-228ENST00000533455 K7ELQ4 463 aaPredicted RBP20.71■□□□□ 0.91
CTSB-228ENST00000533455 TSPYL6Q8N831 410 aa20.71■□□□□ 0.91
CTSB-228ENST00000533455 EDC4Q6P2E9 1401 aaKnown RBP20.71■□□□□ 0.91
CTSB-228ENST00000533455 CPSF1Q10570 1443 aaKnown RBP20.71■□□□□ 0.91
CTSB-228ENST00000533455 AATKQ6ZMQ8 1374 aa20.71■□□□□ 0.91
CTSB-228ENST00000533455 IL13P35225 146 aa20.71■□□□□ 0.91
CTSB-228ENST00000533455 C1orf115Q9H7X2 142 aa20.71■□□□□ 0.91
CTSB-228ENST00000533455 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
CTSB-228ENST00000533455 MON2Q7Z3U7 1717 aa20.7■□□□□ 0.9
CTSB-228ENST00000533455 CDC45O75419 566 aa20.7■□□□□ 0.9
CTSB-228ENST00000533455 LMOD3Q0VAK6 560 aa20.7■□□□□ 0.9
CTSB-228ENST00000533455 API5Q9BZZ5 524 aaKnown RBP20.7■□□□□ 0.9
CTSB-228ENST00000533455 HMOX1P09601 288 aa20.69■□□□□ 0.9
CTSB-228ENST00000533455 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.69■□□□□ 0.9
CTSB-228ENST00000533455 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
CTSB-228ENST00000533455 SENP3Q9H4L4 574 aaPredicted RBP20.69■□□□□ 0.9
CTSB-228ENST00000533455 CD2BP2O95400 341 aaKnown RBP20.68■□□□□ 0.9
CTSB-228ENST00000533455 TWISTNBQ3B726 338 aaPredicted RBP20.68■□□□□ 0.9
CTSB-228ENST00000533455 CLEC17AQ6ZS10 378 aa20.68■□□□□ 0.9
CTSB-228ENST00000533455 CFAP44Q96MT7 982 aa20.68■□□□□ 0.9
CTSB-228ENST00000533455 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
CTSB-228ENST00000533455 FAM69CQ0P6D2 419 aa20.67■□□□□ 0.9
CTSB-228ENST00000533455 FBLN1P23142 703 aa20.66■□□□□ 0.9
CTSB-228ENST00000533455 NRKQ7Z2Y5 1582 aa20.66■□□□□ 0.9
CTSB-228ENST00000533455 EMILIN1Q9Y6C2 1016 aa20.66■□□□□ 0.9
CTSB-228ENST00000533455 AKAP12Q02952 1782 aa20.66■□□□□ 0.9
CTSB-228ENST00000533455 A2ML1A8K2U0 1454 aa20.64■□□□□ 0.9
CTSB-228ENST00000533455 HSP90AA1P07900 732 aaKnown RBP20.64■□□□□ 0.89
CTSB-228ENST00000533455 FBXO31Q5XUX0 539 aaPredicted RBP20.64■□□□□ 0.89
CTSB-228ENST00000533455 C3P01024 1663 aa20.64■□□□□ 0.89
CTSB-228ENST00000533455 C8orf58Q8NAV2 365 aa20.63■□□□□ 0.89
CTSB-228ENST00000533455 SPATA31D1Q6ZQQ2 1576 aa20.63■□□□□ 0.89
CTSB-228ENST00000533455 GSPT1P15170 499 aaKnown RBP20.63■□□□□ 0.89
CTSB-228ENST00000533455 PLEKHM2Q8IWE5 1019 aa20.63■□□□□ 0.89
CTSB-228ENST00000533455 GAS2L2Q8NHY3 880 aa20.63■□□□□ 0.89
CTSB-228ENST00000533455 DCTPP1Q9H773 170 aa20.63■□□□□ 0.89
CTSB-228ENST00000533455 ITSN1Q15811 1721 aa20.62■□□□□ 0.89
CTSB-228ENST00000533455 GAS2L3Q86XJ1 694 aa20.62■□□□□ 0.89
CTSB-228ENST00000533455 RBM42Q9BTD8 480 aaKnown RBP20.62■□□□□ 0.89
CTSB-228ENST00000533455 NRXN3Q9Y4C0 1643 aa20.62■□□□□ 0.89
CTSB-228ENST00000533455 IBTKQ9P2D0 1353 aaPredicted RBP20.62■□□□□ 0.89
CTSB-228ENST00000533455 UBE2Q2Q8WVN8 375 aa20.61■□□□□ 0.89
CTSB-228ENST00000533455 ELL2O00472 640 aaPredicted RBP20.61■□□□□ 0.89
CTSB-228ENST00000533455 RABEP1Q15276 862 aa20.61■□□□□ 0.89
CTSB-228ENST00000533455 WAPLQ7Z5K2 1190 aa20.61■□□□□ 0.89
CTSB-228ENST00000533455 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
CTSB-228ENST00000533455 CPS1P31327 1500 aa20.6■□□□□ 0.89
CTSB-228ENST00000533455 TTC22Q5TAA0 569 aa20.6■□□□□ 0.89
CTSB-228ENST00000533455 INTS3Q68E01 1043 aaKnown RBP20.6■□□□□ 0.89
CTSB-228ENST00000533455 NME9Q86XW9 330 aa20.6■□□□□ 0.89
CTSB-228ENST00000533455 SSFA2P28290 1259 aa20.6■□□□□ 0.89
CTSB-228ENST00000533455 RGS12O14924 1447 aa20.59■□□□□ 0.89
CTSB-228ENST00000533455 ESPNB1AK53 854 aa20.59■□□□□ 0.89
CTSB-228ENST00000533455 GOLGA6L22H0YM25 854 aa20.59■□□□□ 0.89
CTSB-228ENST00000533455 STAG3Q9UJ98 1225 aa20.59■□□□□ 0.89
CTSB-228ENST00000533455 AGLP35573 1532 aa20.59■□□□□ 0.89
CTSB-228ENST00000533455 DIP2BQ9P265 1576 aa20.59■□□□□ 0.89
CTSB-228ENST00000533455 WASLO00401 505 aaPredicted RBP20.58■□□□□ 0.89
CTSB-228ENST00000533455 FOXD4L1Q9NU39 408 aa20.58■□□□□ 0.89
CTSB-228ENST00000533455 ANKRD44Q8N8A2 993 aa20.58■□□□□ 0.88
CTSB-228ENST00000533455 KLHL40Q2TBA0 621 aa20.56■□□□□ 0.88
CTSB-228ENST00000533455 AK9Q5TCS8 1911 aa20.56■□□□□ 0.88
CTSB-228ENST00000533455 BAG4O95429 457 aaKnown RBP20.56■□□□□ 0.88
CTSB-228ENST00000533455 HAP1P54257 671 aaPredicted RBP20.56■□□□□ 0.88
CTSB-228ENST00000533455 COG3Q96JB2 828 aa20.56■□□□□ 0.88
CTSB-228ENST00000533455 PPP6R1Q9UPN7 881 aa20.56■□□□□ 0.88
CTSB-228ENST00000533455 ERBB4Q15303 1308 aa20.56■□□□□ 0.88
CTSB-228ENST00000533455 RPAP2Q8IXW5 612 aaPredicted RBP20.55■□□□□ 0.88
CTSB-228ENST00000533455 NAP1L5Q96NT1 182 aaPredicted RBP20.55■□□□□ 0.88
CTSB-228ENST00000533455 USP26Q9BXU7 913 aa20.55■□□□□ 0.88
CTSB-228ENST00000533455 ZRANB1Q9UGI0 708 aa20.55■□□□□ 0.88
CTSB-228ENST00000533455 FAM83GA6ND36 823 aa20.54■□□□□ 0.88
CTSB-228ENST00000533455 KIAA0232Q92628 1395 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms